RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	YMR265C	Q03508	461 aa	Known RBP	7.99	□□□□□ -1.13
SHE9	YDR393W	SYT1	Q06836	1226 aa		7.99	□□□□□ -1.13
SHE9	YDR393W	SLX8	P40072	274 aa		7.98	□□□□□ -1.13
SHE9	YDR393W	ATG3	P40344	310 aa		7.98	□□□□□ -1.13
SHE9	YDR393W	YFL066C	P43538	392 aa		7.98	□□□□□ -1.13
SHE9	YDR393W	SUM1	P46676	1062 aa		7.98	□□□□□ -1.13
SHE9	YDR393W	ENO2	P00925	437 aa	Known RBP	7.97	□□□□□ -1.13
SHE9	YDR393W	YNL108C	P53929	270 aa		7.97	□□□□□ -1.13
SHE9	YDR393W	HDA3	Q06623	655 aa		7.97	□□□□□ -1.13
SHE9	YDR393W	AI1	P03875	834 aa		7.97	□□□□□ -1.13
SHE9	YDR393W	LSB3	P43603	459 aa	Known RBP	7.97	□□□□□ -1.13
SHE9	YDR393W	JJJ2	P46997	583 aa		7.96	□□□□□ -1.14
SHE9	YDR393W	KRE33	P53914	1056 aa	Known RBP	7.96	□□□□□ -1.14
SHE9	YDR393W	THI72	Q08579	599 aa		7.96	□□□□□ -1.14
SHE9	YDR393W	YDR461C-A	Q2V2P7	80 aa		7.96	□□□□□ -1.14
SHE9	YDR393W	RIM21	P48565	533 aa		7.94	□□□□□ -1.14
SHE9	YDR393W	SHM1	P37292	490 aa	Predicted RBP	7.93	□□□□□ -1.14
SHE9	YDR393W	ALA1	P40825	983 aa	Known RBP	7.93	□□□□□ -1.14
SHE9	YDR393W	ADE12	P80210	433 aa	Known RBP	7.93	□□□□□ -1.14
SHE9	YDR393W	RDS2	P19541	446 aa	Known RBP	7.91	□□□□□ -1.14
SHE9	YDR393W	IRE1	P32361	1115 aa		7.91	□□□□□ -1.14
SHE9	YDR393W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.91	□□□□□ -1.14	not detected
SHE9	YDR393W	YPQ2	Q06328	317 aa		7.87	□□□□□ -1.15
SHE9	YDR393W	PSH1	Q12161	406 aa		7.87	□□□□□ -1.15
SHE9	YDR393W	SBE2	P42223	864 aa	Known RBP	7.86	□□□□□ -1.15
SHE9	YDR393W	YJL007C	P47080	104 aa		7.86	□□□□□ -1.15
SHE9	YDR393W	SWI5	P08153	709 aa		7.85	□□□□□ -1.15
SHE9	YDR393W	PDC6	P26263	563 aa	Known RBP	7.85	□□□□□ -1.15
SHE9	YDR393W	AIM9	P40053	627 aa	Known RBP	7.84	□□□□□ -1.15
SHE9	YDR393W	RPS31	P05759	152 aa	Known RBP	7.84	□□□□□ -1.16
SHE9	YDR393W	CCT8	P47079	568 aa	Known RBP	7.84	□□□□□ -1.16
SHE9	YDR393W	YPR053C	Q6Q5F3	151 aa		7.84	□□□□□ -1.16
SHE9	YDR393W	FPS1	P23900	669 aa		7.83	□□□□□ -1.16
SHE9	YDR393W	MRPL16	P38064	232 aa		7.83	□□□□□ -1.16
SHE9	YDR393W	MRX10	Q05648	414 aa		7.83	□□□□□ -1.16
SHE9	YDR393W	TDA6	Q06466	467 aa		7.83	□□□□□ -1.16
SHE9	YDR393W	GPM1	P00950	247 aa	Known RBP	7.82	□□□□□ -1.16
SHE9	YDR393W	STB3	Q12427	513 aa		7.81	□□□□□ -1.16
SHE9	YDR393W	ENO1	P00924	437 aa	Known RBP	7.8	□□□□□ -1.16
SHE9	YDR393W	RPS6A	P0CX37	236 aa	Known RBP	7.8	□□□□□ -1.16
SHE9	YDR393W	RPS6B	P0CX38	236 aa	Predicted RBP	7.8	□□□□□ -1.16
SHE9	YDR393W	BIM1	P40013	344 aa		7.79	□□□□□ -1.16
SHE9	YDR393W	ATG32	P40458	529 aa		7.79	□□□□□ -1.16
SHE9	YDR393W	SKN7	P38889	622 aa		7.78	□□□□□ -1.16
SHE9	YDR393W	LEU1	P07264	779 aa	Known RBP	7.77	□□□□□ -1.17
SHE9	YDR393W	SPR3	P41901	512 aa		7.77	□□□□□ -1.17
SHE9	YDR393W	YFL034W	P43564	1073 aa		7.77	□□□□□ -1.17
SHE9	YDR393W	YNR014W	P53719	212 aa		7.77	□□□□□ -1.17
SHE9	YDR393W	YNL165W	P53891	406 aa		7.77	□□□□□ -1.17
SHE9	YDR393W	TIF1	P10081	395 aa	Known RBP	7.76	□□□□□ -1.17
SHE9	YDR393W	MCM1	P11746	286 aa		7.76	□□□□□ -1.17
SHE9	YDR393W	NTH2	P35172	780 aa		7.76	□□□□□ -1.17
SHE9	YDR393W	ALD2	P47771	506 aa		7.76	□□□□□ -1.17
SHE9	YDR393W	YMR187C	Q03236	431 aa		7.76	□□□□□ -1.17
SHE9	YDR393W	MCX1	P38323	520 aa	Predicted RBP	7.74	□□□□□ -1.17
SHE9	YDR393W	PDC5	P16467	563 aa	Known RBP	7.73	□□□□□ -1.17
SHE9	YDR393W	PDI1	P17967	522 aa	Known RBP	7.73	□□□□□ -1.17
SHE9	YDR393W	PEP12	P32854	288 aa		7.73	□□□□□ -1.17
SHE9	YDR393W	KNS1	P32350	737 aa	Predicted RBP	7.72	□□□□□ -1.17
SHE9	YDR393W	RTG2	P32608	588 aa	Known RBP	7.72	□□□□□ -1.17
SHE9	YDR393W	TY1A-DR2	Q03964	440 aa	Known RBP	7.72	□□□□□ -1.17
SHE9	YDR393W	TSC13	Q99190	310 aa		7.72	□□□□□ -1.17
SHE9	YDR393W	YCK2	P23292	546 aa	Known RBP	7.71	□□□□□ -1.18
SHE9	YDR393W	MLF3	P32047	452 aa		7.71	□□□□□ -1.18
SHE9	YDR393W	MSC7	P38694	644 aa		7.71	□□□□□ -1.18
SHE9	YDR393W	BOI2	P39969	1040 aa		7.71	□□□□□ -1.18
SHE9	YDR393W	RGP1	P16664	663 aa		7.7	□□□□□ -1.18
SHE9	YDR393W	RPL34B	P40525	121 aa	Known RBP	7.7	□□□□□ -1.18
SHE9	YDR393W	YTA6	P40328	754 aa		7.69	□□□□□ -1.18
SHE9	YDR393W	YDR215C	Q12240	137 aa		7.69	□□□□□ -1.18
SHE9	YDR393W	CYT1	P07143	309 aa		7.68	□□□□□ -1.18
SHE9	YDR393W	MET1	P36150	593 aa		7.67	□□□□□ -1.18
SHE9	YDR393W	HGH1	P48362	394 aa	Known RBP	7.67	□□□□□ -1.18
SHE9	YDR393W	Q0182	Q9ZZW1	134 aa		7.67	□□□□□ -1.18
SHE9	YDR393W	RPP1A	P05318	106 aa	Predicted RBP	7.65	□□□□□ -1.18
SHE9	YDR393W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	RIP-Chip
SHE9	YDR393W	SLN1	P39928	1220 aa	Predicted RBP	7.64	□□□□□ -1.19
SHE9	YDR393W	ACS2	P52910	683 aa	Known RBP	7.64	□□□□□ -1.19
SHE9	YDR393W	SBP1	P10080	294 aa	Known RBP	7.62	□□□□□ -1.19
SHE9	YDR393W	PHO87	P25360	923 aa		7.62	□□□□□ -1.19
SHE9	YDR393W	KTR7	P40504	517 aa		7.62	□□□□□ -1.19
SHE9	YDR393W	UBP1	P25037	809 aa		7.6	□□□□□ -1.19
SHE9	YDR393W	MCA1	Q08601	432 aa		7.6	□□□□□ -1.19
SHE9	YDR393W	MTO1	P53070	669 aa		7.59	□□□□□ -1.19
SHE9	YDR393W	UTP4	Q06679	776 aa	Known RBP	7.59	□□□□□ -1.19
SHE9	YDR393W	AMN1	P38285	549 aa	Predicted RBP	7.59	□□□□□ -1.2
SHE9	YDR393W	GAS4	Q08271	471 aa		7.59	□□□□□ -1.2
SHE9	YDR393W	HAP4	P14064	554 aa		7.58	□□□□□ -1.2
SHE9	YDR393W	HEH2	Q03281	663 aa		7.58	□□□□□ -1.2
SHE9	YDR393W	HXT5	P38695	592 aa		7.57	□□□□□ -1.2
SHE9	YDR393W	PRY1	P47032	299 aa		7.57	□□□□□ -1.2
SHE9	YDR393W	SKP1	P52286	194 aa		7.57	□□□□□ -1.2
SHE9	YDR393W	SCD5	P34758	872 aa		7.56	□□□□□ -1.2
SHE9	YDR393W	TAT1	P38085	619 aa		7.56	□□□□□ -1.2
SHE9	YDR393W	PRK1	P40494	810 aa		7.56	□□□□□ -1.2
SHE9	YDR393W	NGR1	P32831	672 aa	Known RBP	7.55	□□□□□ -1.2
SHE9	YDR393W	SIS2	P36024	562 aa		7.55	□□□□□ -1.2
SHE9	YDR393W	ROM1	P53046	1155 aa		7.55	□□□□□ -1.2
SHE9	YDR393W	LSB6	P42951	607 aa		7.54	□□□□□ -1.2
SHE9	YDR393W	CUS1	Q02554	436 aa	Predicted RBP	7.54	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms