RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A GUT2P32191 649 aa4.53□□□□□ -1.68
SDH6YDR379C-A ALA1P40825 983 aaKnown RBP4.52□□□□□ -1.69
SDH6YDR379C-A KTR1P27810 393 aaKnown RBP4.51□□□□□ -1.69
SDH6YDR379C-A IRE1P32361 1115 aa4.5□□□□□ -1.69
SDH6YDR379C-A TPS3P38426 1054 aaKnown RBP4.5□□□□□ -1.69
SDH6YDR379C-A UTP7P40055 554 aaKnown RBP4.5□□□□□ -1.69
SDH6YDR379C-A TY1A-DR2Q03964 440 aaKnown RBP4.5□□□□□ -1.69
SDH6YDR379C-A FRA1Q07825 749 aa4.5□□□□□ -1.69
SDH6YDR379C-A STB3Q12427 513 aa4.5□□□□□ -1.69
SDH6YDR379C-A JJJ2P46997 583 aa4.48□□□□□ -1.69
SDH6YDR379C-A STE20Q03497 939 aaKnown RBP4.47□□□□□ -1.69
SDH6YDR379C-A SPT2P06843 333 aaPredicted RBP4.46□□□□□ -1.7
SDH6YDR379C-A UTR2P32623 467 aa4.46□□□□□ -1.7
SDH6YDR379C-A SPR3P41901 512 aa4.46□□□□□ -1.7
SDH6YDR379C-A BUD9P53226 547 aa4.46□□□□□ -1.7
SDH6YDR379C-A SHM1P37292 490 aaPredicted RBP4.45□□□□□ -1.7
SDH6YDR379C-A TBS1P38114 1094 aa4.45□□□□□ -1.7
SDH6YDR379C-A ISR1Q06098 443 aaKnown RBP4.45□□□□□ -1.7
SDH6YDR379C-A RAD59Q12223 238 aa4.45□□□□□ -1.7
SDH6YDR379C-A SUM1P46676 1062 aa4.44□□□□□ -1.7
SDH6YDR379C-A AOS1Q06624 347 aa4.44□□□□□ -1.7
SDH6YDR379C-A PSH1Q12161 406 aa4.44□□□□□ -1.7
SDH6YDR379C-A PDC6P26263 563 aaKnown RBP4.43□□□□□ -1.7
SDH6YDR379C-A NHA1Q99271 985 aa4.43□□□□□ -1.7
SDH6YDR379C-A LIP5P32875 414 aa4.41□□□□□ -1.7
SDH6YDR379C-A PGM1P33401 570 aaKnown RBP4.41□□□□□ -1.7
SDH6YDR379C-A MED7Q08278 222 aa4.41□□□□□ -1.7
SDH6YDR379C-A PGM2P37012 569 aaKnown RBP4.4□□□□□ -1.71
SDH6YDR379C-A ALG14P38242 237 aa4.4□□□□□ -1.71
SDH6YDR379C-A ELM1P32801 640 aa4.39□□□□□ -1.71
SDH6YDR379C-A YKR073CP36153 106 aa4.39□□□□□ -1.71
SDH6YDR379C-A MSC7P38694 644 aa4.39□□□□□ -1.71
SDH6YDR379C-A CSN12P47130 423 aa4.39□□□□□ -1.71
SDH6YDR379C-A TRP3P00937 484 aa4.38□□□□□ -1.71
SDH6YDR379C-A AI3P03877 415 aa4.38□□□□□ -1.71
SDH6YDR379C-A MAK16P10962 306 aaPredicted RBP4.38□□□□□ -1.71
SDH6YDR379C-A RPP1AP05318 106 aaPredicted RBP4.36□□□□□ -1.71
SDH6YDR379C-A SAC7P17121 654 aa4.36□□□□□ -1.71
SDH6YDR379C-A COQ2P32378 372 aa4.36□□□□□ -1.71
SDH6YDR379C-A GLC3P32775 704 aa4.36□□□□□ -1.71
SDH6YDR379C-A KAE1P36132 386 aa4.36□□□□□ -1.71
SDH6YDR379C-A GAS5Q08193 484 aa4.36□□□□□ -1.71
SDH6YDR379C-A TOS1P38288 455 aa4.35□□□□□ -1.71
SDH6YDR379C-A UBP5P39944 805 aa4.35□□□□□ -1.71
SDH6YDR379C-A RPS31P05759 152 aaKnown RBP4.34□□□□□ -1.71
SDH6YDR379C-A HAL5P38970 855 aaKnown RBP4.34□□□□□ -1.71
SDH6YDR379C-A ARI1P53111 347 aaKnown RBP4.34□□□□□ -1.71
SDH6YDR379C-A SAS10Q12136 610 aaPredicted RBP4.34□□□□□ -1.71
SDH6YDR379C-A PUB1P32588 453 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72 RIP-Chip
SDH6YDR379C-A SLX8P40072 274 aa4.33□□□□□ -1.72
SDH6YDR379C-A CTH1P47976 325 aa4.33□□□□□ -1.72
SDH6YDR379C-A LEU1P07264 779 aaKnown RBP4.32□□□□□ -1.72
SDH6YDR379C-A NAB2P32505 525 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SDH6YDR379C-A RRM3P38766 723 aa4.32□□□□□ -1.72
SDH6YDR379C-A EMP47P43555 445 aa4.32□□□□□ -1.72
SDH6YDR379C-A APL6P46682 809 aa4.32□□□□□ -1.72
SDH6YDR379C-A MRX12P47084 519 aa4.32□□□□□ -1.72
SDH6YDR379C-A YNR021WP53723 404 aaKnown RBP4.31□□□□□ -1.72
SDH6YDR379C-A BRE4Q07660 1125 aa4.31□□□□□ -1.72
SDH6YDR379C-A YLR122CQ12312 125 aa4.31□□□□□ -1.72
SDH6YDR379C-A NAR1P23503 491 aaKnown RBP4.3□□□□□ -1.72
SDH6YDR379C-A ISF1P32488 338 aa4.3□□□□□ -1.72
SDH6YDR379C-A RGP1P16664 663 aa4.29□□□□□ -1.72
SDH6YDR379C-A ALD2P47771 506 aa4.29□□□□□ -1.72
SDH6YDR379C-A GIS4Q04233 774 aa4.29□□□□□ -1.72
SDH6YDR379C-A GIS1Q03833 894 aa4.28□□□□□ -1.72
SDH6YDR379C-A RNQ1P25367 405 aa4.27□□□□□ -1.73
SDH6YDR379C-A SFA1P32771 386 aa4.27□□□□□ -1.73
SDH6YDR379C-A PRK1P40494 810 aa4.27□□□□□ -1.73
SDH6YDR379C-A YGR130CP53278 816 aa4.27□□□□□ -1.73
SDH6YDR379C-A HEH2Q03281 663 aa4.27□□□□□ -1.73
SDH6YDR379C-A HDA3Q06623 655 aa4.27□□□□□ -1.73
SDH6YDR379C-A YKL222CP35995 705 aa4.25□□□□□ -1.73
SDH6YDR379C-A CHS2P14180 963 aa4.24□□□□□ -1.73
SDH6YDR379C-A YTA6P40328 754 aa4.24□□□□□ -1.73
SDH6YDR379C-A HPC2Q01448 625 aa4.24□□□□□ -1.73
SDH6YDR379C-A YPQ2Q06328 317 aa4.24□□□□□ -1.73
SDH6YDR379C-A MAG2Q06436 670 aaKnown RBP4.24□□□□□ -1.73
SDH6YDR379C-A YCR015CP25616 317 aa4.23□□□□□ -1.73
SDH6YDR379C-A SOH1P38633 127 aa4.23□□□□□ -1.73
SDH6YDR379C-A MCM16Q12262 181 aa4.23□□□□□ -1.73
SDH6YDR379C-A RSC6P25632 483 aa4.22□□□□□ -1.73
SDH6YDR379C-A NGR1P32831 672 aaKnown RBP4.22□□□□□ -1.73
SDH6YDR379C-A SAF1P38352 637 aa4.22□□□□□ -1.73
SDH6YDR379C-A YNL165WP53891 406 aa4.22□□□□□ -1.73
SDH6YDR379C-A TFB3Q03290 321 aa4.21□□□□□ -1.74
SDH6YDR379C-A AIM7Q12156 149 aa4.2□□□□□ -1.74
SDH6YDR379C-A CYC7P00045 113 aa4.19□□□□□ -1.74
SDH6YDR379C-A SWI5P08153 709 aa4.19□□□□□ -1.74
SDH6YDR379C-A SSA2P10592 639 aaKnown RBP4.17□□□□□ -1.74
SDH6YDR379C-A MLF3P32047 452 aa4.17□□□□□ -1.74
SDH6YDR379C-A NCL1P38205 684 aaKnown RBP4.17□□□□□ -1.74
SDH6YDR379C-A ATG3P40344 310 aa4.17□□□□□ -1.74
SDH6YDR379C-A UTP13Q05946 817 aaKnown RBP4.17□□□□□ -1.74
SDH6YDR379C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
SDH6YDR379C-A AKR1P39010 764 aa4.16□□□□□ -1.74
SDH6YDR379C-A SPO74P45819 413 aa4.16□□□□□ -1.74
SDH6YDR379C-A NAM7P30771 971 aaKnown RBP4.15□□□□□ -1.75
SDH6YDR379C-A SEG2P34250 1132 aa4.15□□□□□ -1.75
SDH6YDR379C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms