RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W NCR1Q12200 1170 aa3.15□□□□□ -1.9
SWR1YDR334W KRI1P42846 591 aaKnown RBP3.15□□□□□ -1.91
SWR1YDR334W PML39Q03760 334 aa3.15□□□□□ -1.91
SWR1YDR334W YPR084WQ06821 456 aa3.15□□□□□ -1.91
SWR1YDR334W PKH3Q03306 898 aaPredicted RBP3.14□□□□□ -1.91
SWR1YDR334W YBL029C-AQ3E756 94 aa3.14□□□□□ -1.91
SWR1YDR334W UBP1P25037 809 aa3.14□□□□□ -1.91
SWR1YDR334W TFG1P41895 735 aaPredicted RBP3.14□□□□□ -1.91
SWR1YDR334W LDB19Q12502 818 aa3.14□□□□□ -1.91
SWR1YDR334W NUD1P32336 851 aa3.14□□□□□ -1.91
SWR1YDR334W DEF1P35732 738 aaKnown RBP3.14□□□□□ -1.91
SWR1YDR334W ENP1P38333 483 aaKnown RBP3.14□□□□□ -1.91
SWR1YDR334W NAB3P38996 802 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
SWR1YDR334W RPL34BP40525 121 aaKnown RBP3.14□□□□□ -1.91
SWR1YDR334W TUM1Q08686 304 aaKnown RBP3.14□□□□□ -1.91
SWR1YDR334W YRR1Q12172 810 aa3.13□□□□□ -1.91
SWR1YDR334W TRM1P15565 570 aaKnown RBP3.13□□□□□ -1.91
SWR1YDR334W BUD31P25337 157 aaPredicted RBP3.13□□□□□ -1.91
SWR1YDR334W YJL007CP47080 104 aa3.13□□□□□ -1.91
SWR1YDR334W PEX29Q03370 554 aa3.13□□□□□ -1.91
SWR1YDR334W MCM16Q12262 181 aa3.13□□□□□ -1.91
SWR1YDR334W ENO2P00925 437 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W MOD5P07884 428 aa3.12□□□□□ -1.91
SWR1YDR334W RDS2P19541 446 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W RTG2P32608 588 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W SLD2P34252 453 aa3.12□□□□□ -1.91
SWR1YDR334W SLX8P40072 274 aa3.12□□□□□ -1.91
SWR1YDR334W ESS1P22696 170 aa3.12□□□□□ -1.91
SWR1YDR334W HIF1Q12373 385 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-DR4O74302 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-HP0C2I4 478 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W TY1A-AP0CX57 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-PR1P0CX58 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-ORP0CX59 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-PR2P0CX60 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-DR5P0CX65 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-ER2P0CX66 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-GR3P0CX67 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-LR1P0CX68 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-MR2P0CX69 440 aa3.12□□□□□ -1.91
SWR1YDR334W SLY41P22215 453 aa3.12□□□□□ -1.91
SWR1YDR334W PHO87P25360 923 aa3.12□□□□□ -1.91
SWR1YDR334W GUT2P32191 649 aa3.12□□□□□ -1.91
SWR1YDR334W CDC3P32457 520 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W TY1A-JR2P47099 440 aa3.12□□□□□ -1.91
SWR1YDR334W ARP5P53946 755 aa3.12□□□□□ -1.91
SWR1YDR334W CWC15Q03772 175 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W TY1A-DR1Q03856 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-ML1Q04706 440 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W TY1A-BRQ12217 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-NL2Q12470 440 aa3.12□□□□□ -1.91
SWR1YDR334W TY1A-GR2Q12485 440 aa3.12□□□□□ -1.91
SWR1YDR334W HAP4P14064 554 aa3.12□□□□□ -1.91
SWR1YDR334W VAC17P25591 423 aa3.12□□□□□ -1.91
SWR1YDR334W NPL4P33755 580 aa3.12□□□□□ -1.91
SWR1YDR334W YFL034WP43564 1073 aa3.12□□□□□ -1.91
SWR1YDR334W STR2P47164 639 aa3.12□□□□□ -1.91
SWR1YDR334W ALR1Q08269 859 aa3.12□□□□□ -1.91
SWR1YDR334W NOB1Q08444 459 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W TYW1Q08960 810 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W AIR2Q12476 344 aaKnown RBP3.12□□□□□ -1.91
SWR1YDR334W NOG1Q02892 647 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W NUP157P40064 1391 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W PUP1P25043 261 aa3.11□□□□□ -1.91
SWR1YDR334W YJU3P28321 313 aa3.11□□□□□ -1.91
SWR1YDR334W PRE3P38624 215 aa3.11□□□□□ -1.91
SWR1YDR334W SSF1P38789 453 aaPredicted RBP3.11□□□□□ -1.91
SWR1YDR334W RRD1P40454 393 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W WSC3Q12215 556 aa3.11□□□□□ -1.91
SWR1YDR334W ARG8P18544 423 aa3.11□□□□□ -1.91
SWR1YDR334W MET10P39692 1035 aa3.11□□□□□ -1.91
SWR1YDR334W STE20Q03497 939 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W YML020WQ03722 664 aa3.11□□□□□ -1.91
SWR1YDR334W SVF1Q05515 481 aa3.11□□□□□ -1.91
SWR1YDR334W SRB8P25648 1427 aa3.11□□□□□ -1.91
SWR1YDR334W RPP2AP05319 106 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W PAT1P25644 796 aaKnown RBP3.11□□□□□ -1.91
SWR1YDR334W HEM3P28789 327 aa3.11□□□□□ -1.91
SWR1YDR334W SEN54Q02825 467 aaPredicted RBP3.11□□□□□ -1.91
SWR1YDR334W SPT2P06843 333 aaPredicted RBP3.1□□□□□ -1.91
SWR1YDR334W SEC2P17065 759 aa3.1□□□□□ -1.91
SWR1YDR334W CHL1P22516 861 aaPredicted RBP3.1□□□□□ -1.91
SWR1YDR334W TGL4P36165 910 aa3.1□□□□□ -1.91
SWR1YDR334W BUD20Q08004 166 aaPredicted RBP3.1□□□□□ -1.91
SWR1YDR334W ENO1P00924 437 aaKnown RBP3.1□□□□□ -1.91
SWR1YDR334W PRT1P06103 763 aaKnown RBP3.1□□□□□ -1.91
SWR1YDR334W TEC1P18412 486 aa3.1□□□□□ -1.91
SWR1YDR334W NMD2P38798 1089 aaKnown RBP3.1□□□□□ -1.91
SWR1YDR334W MID1P41821 548 aa3.1□□□□□ -1.91
SWR1YDR334W RPP1AP05318 106 aaPredicted RBP3.1□□□□□ -1.91
SWR1YDR334W MCM1P11746 286 aa3.1□□□□□ -1.91
SWR1YDR334W SEC20P28791 383 aa3.1□□□□□ -1.91
SWR1YDR334W HXT10P43581 546 aa3.1□□□□□ -1.91
SWR1YDR334W GAS4Q08271 471 aa3.1□□□□□ -1.91
SWR1YDR334W PDC1P06169 563 aaKnown RBP3.09□□□□□ -1.91
SWR1YDR334W PPX1P38698 397 aa3.09□□□□□ -1.91
SWR1YDR334W GAL2P13181 574 aa3.09□□□□□ -1.91
SWR1YDR334W MRF1P30775 413 aaPredicted RBP3.09□□□□□ -1.91
SWR1YDR334W MRT4P33201 236 aaKnown RBP3.09□□□□□ -1.91
SWR1YDR334W STM1P39015 273 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms