RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W SUM1P46676 1062 aa5.22□□□□□ -1.57
SSF2YDR312W AIM9P40053 627 aaKnown RBP5.21□□□□□ -1.58
SSF2YDR312W NAM8Q00539 523 aaKnown RBP5.21□□□□□ -1.58
SSF2YDR312W CCP1P00431 361 aa5.2□□□□□ -1.58
SSF2YDR312W SLA1P32790 1244 aa5.2□□□□□ -1.58
SSF2YDR312W YFL034WP43564 1073 aa5.2□□□□□ -1.58
SSF2YDR312W YGR035CP53222 116 aa5.2□□□□□ -1.58
SSF2YDR312W HPF1Q05164 967 aa5.2□□□□□ -1.58
SSF2YDR312W SWI5P08153 709 aa5.19□□□□□ -1.58
SSF2YDR312W SIS2P36024 562 aa5.18□□□□□ -1.58
SSF2YDR312W AHP1P38013 176 aaKnown RBP5.18□□□□□ -1.58
SSF2YDR312W ALA1P40825 983 aaKnown RBP5.18□□□□□ -1.58
SSF2YDR312W UBP15P50101 1230 aa5.18□□□□□ -1.58
SSF2YDR312W TAF7Q05021 590 aa5.18□□□□□ -1.58
SSF2YDR312W TY1A-DR3Q12441 440 aa5.18□□□□□ -1.58
SSF2YDR312W TSC13Q99190 310 aa5.18□□□□□ -1.58
SSF2YDR312W RPS6AP0CX37 236 aaKnown RBP5.17□□□□□ -1.58
SSF2YDR312W RPS6BP0CX38 236 aaPredicted RBP5.17□□□□□ -1.58
SSF2YDR312W PDI1P17967 522 aaKnown RBP5.17□□□□□ -1.58
SSF2YDR312W NTH2P35172 780 aa5.17□□□□□ -1.58
SSF2YDR312W TRK2P28584 889 aa5.16□□□□□ -1.58
SSF2YDR312W KTR7P40504 517 aa5.16□□□□□ -1.58
SSF2YDR312W JJJ2P46997 583 aa5.16□□□□□ -1.58
SSF2YDR312W YPQ2Q06328 317 aa5.16□□□□□ -1.58
SSF2YDR312W LYS5P50113 272 aa5.16□□□□□ -1.58
SSF2YDR312W CUZ1P53899 274 aa5.16□□□□□ -1.58
SSF2YDR312W PHO87P25360 923 aa5.15□□□□□ -1.59
SSF2YDR312W IRE1P32361 1115 aa5.15□□□□□ -1.59
SSF2YDR312W TTI1P36097 1038 aa5.15□□□□□ -1.59
SSF2YDR312W SHM1P37292 490 aaPredicted RBP5.15□□□□□ -1.59
SSF2YDR312W ACS2P52910 683 aaKnown RBP5.15□□□□□ -1.59
SSF2YDR312W DPH6Q12429 685 aa5.15□□□□□ -1.59
SSF2YDR312W HAP4P14064 554 aa5.14□□□□□ -1.59
SSF2YDR312W MCM1P11746 286 aa5.13□□□□□ -1.59
SSF2YDR312W RPS31P05759 152 aaKnown RBP5.12□□□□□ -1.59
SSF2YDR312W CYT1P07143 309 aa5.12□□□□□ -1.59
SSF2YDR312W GAL2P13181 574 aa5.12□□□□□ -1.59
SSF2YDR312W DIT1P21623 536 aa5.12□□□□□ -1.59
SSF2YDR312W TGL4P36165 910 aa5.12□□□□□ -1.59
SSF2YDR312W JJJ3P47138 172 aa5.12□□□□□ -1.59
SSF2YDR312W YMR265CQ03508 461 aaKnown RBP5.12□□□□□ -1.59
SSF2YDR312W GAS4Q08271 471 aa5.12□□□□□ -1.59
SSF2YDR312W RLF2Q12495 606 aa5.12□□□□□ -1.59
SSF2YDR312W PDC6P26263 563 aaKnown RBP5.11□□□□□ -1.59
SSF2YDR312W CEM1P39525 442 aa5.11□□□□□ -1.59
SSF2YDR312W PSH1Q12161 406 aa5.11□□□□□ -1.59
SSF2YDR312W KRE33P53914 1056 aaKnown RBP5.1□□□□□ -1.59
SSF2YDR312W UBP1P25037 809 aa5.09□□□□□ -1.59
SSF2YDR312W CPS1P27614 576 aa5.09□□□□□ -1.59
SSF2YDR312W ROM1P53046 1155 aa5.09□□□□□ -1.59
SSF2YDR312W YNL165WP53891 406 aa5.09□□□□□ -1.59
SSF2YDR312W SYT1Q06836 1226 aa5.09□□□□□ -1.59
SSF2YDR312W YDR461C-AQ2V2P7 80 aa5.09□□□□□ -1.59
SSF2YDR312W ADE12P80210 433 aaKnown RBP5.08□□□□□ -1.6
SSF2YDR312W ECM23Q02710 187 aa5.08□□□□□ -1.6
SSF2YDR312W MRPL16P38064 232 aa5.07□□□□□ -1.6
SSF2YDR312W LEU1P07264 779 aaKnown RBP5.06□□□□□ -1.6
SSF2YDR312W NGR1P32831 672 aaKnown RBP5.06□□□□□ -1.6
SSF2YDR312W YTA6P40328 754 aa5.06□□□□□ -1.6
SSF2YDR312W Q0182Q9ZZW1 134 aa5.06□□□□□ -1.6
SSF2YDR312W VAN1P23642 535 aa5.05□□□□□ -1.6
SSF2YDR312W MLF3P32047 452 aa5.05□□□□□ -1.6
SSF2YDR312W ALD2P47771 506 aa5.05□□□□□ -1.6
SSF2YDR312W STB3Q12427 513 aa5.05□□□□□ -1.6
SSF2YDR312W FPS1P23900 669 aa5.04□□□□□ -1.6
SSF2YDR312W PUP1P25043 261 aa5.04□□□□□ -1.6
SSF2YDR312W UBX7P38349 436 aa5.04□□□□□ -1.6
SSF2YDR312W SCD5P34758 872 aa5.04□□□□□ -1.6
SSF2YDR312W SPR3P41901 512 aa5.04□□□□□ -1.6
SSF2YDR312W UTP4Q06679 776 aaKnown RBP5.04□□□□□ -1.6
SSF2YDR312W RGP1P16664 663 aa5.03□□□□□ -1.6
SSF2YDR312W SSA4P22202 642 aaKnown RBP5.03□□□□□ -1.6
SSF2YDR312W HXT5P38695 592 aa5.03□□□□□ -1.6
SSF2YDR312W ICP55P40051 511 aa5.03□□□□□ -1.6
SSF2YDR312W CWH41P53008 833 aa5.03□□□□□ -1.6
SSF2YDR312W TRS33Q99394 268 aa5.03□□□□□ -1.6
SSF2YDR312W AI1P03875 834 aa5.01□□□□□ -1.61
SSF2YDR312W RPP1AP05318 106 aaPredicted RBP5.01□□□□□ -1.61
SSF2YDR312W SUV3P32580 737 aa5.01□□□□□ -1.61
SSF2YDR312W MTO1P53070 669 aa5.01□□□□□ -1.61
SSF2YDR312W MDJ1P35191 511 aa5□□□□□ -1.61
SSF2YDR312W GPM1P00950 247 aaKnown RBP4.99□□□□□ -1.61
SSF2YDR312W KAP122P32767 1081 aa4.99□□□□□ -1.61
SSF2YDR312W YFL066CP43538 392 aa4.99□□□□□ -1.61
SSF2YDR312W NSG2P53898 299 aa4.99□□□□□ -1.61
SSF2YDR312W PUF6Q04373 656 aaKnown RBP4.99□□□□□ -1.61
SSF2YDR312W CAB1Q04430 367 aa4.99□□□□□ -1.61
SSF2YDR312W YML083CQ04526 418 aa4.99□□□□□ -1.61
SSF2YDR312W NOB1Q08444 459 aaKnown RBP4.99□□□□□ -1.61
SSF2YDR312W THI72Q08579 599 aa4.99□□□□□ -1.61
SSF2YDR312W PHM7Q12252 991 aa4.99□□□□□ -1.61
SSF2YDR312W SKP1P52286 194 aa4.98□□□□□ -1.61
SSF2YDR312W TY1A-DR2Q03964 440 aaKnown RBP4.98□□□□□ -1.61
SSF2YDR312W PUS1Q12211 544 aaKnown RBP4.98□□□□□ -1.61
SSF2YDR312W MSC7P38694 644 aa4.97□□□□□ -1.61
SSF2YDR312W YBR197CP38306 217 aa4.96□□□□□ -1.62
SSF2YDR312W ALD4P46367 519 aaKnown RBP4.96□□□□□ -1.62
SSF2YDR312W CUS1Q02554 436 aaPredicted RBP4.96□□□□□ -1.62
SSF2YDR312W PUN1Q06991 263 aa4.96□□□□□ -1.62
SSF2YDR312W SUB2Q07478 446 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms