RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	ACF4	P47129	309 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	OYE2	Q03558	400 aa	Known RBP	4.66	□□□□□ -1.66
HTA1	YDR225W	NUT2	Q06213	157 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	GAS4	Q08271	471 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	MET32	Q12041	191 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	TSC13	Q99190	310 aa		4.66	□□□□□ -1.66
HTA1	YDR225W	FUR4	P05316	633 aa	Known RBP	4.65	□□□□□ -1.67
HTA1	YDR225W	NNF1	P47149	201 aa		4.65	□□□□□ -1.67
HTA1	YDR225W	ALR1	Q08269	859 aa		4.65	□□□□□ -1.67
HTA1	YDR225W	PDI1	P17967	522 aa	Known RBP	4.64	□□□□□ -1.67
HTA1	YDR225W	VAN1	P23642	535 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	MGE1	P38523	228 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	GLO3	P38682	493 aa	Known RBP	4.64	□□□□□ -1.67
HTA1	YDR225W	QDR1	P40475	563 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	YJR107W	P47145	328 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	STB3	Q12427	513 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	FRT1	Q99332	602 aa		4.64	□□□□□ -1.67
HTA1	YDR225W	MET4	P32389	672 aa		4.63	□□□□□ -1.67
HTA1	YDR225W	BRN1	P38170	754 aa		4.63	□□□□□ -1.67
HTA1	YDR225W	ASH1	P34233	588 aa		4.62	□□□□□ -1.67
HTA1	YDR225W	GCR2	Q01722	534 aa		4.62	□□□□□ -1.67
HTA1	YDR225W	SYH1	Q02875	849 aa	Known RBP	4.62	□□□□□ -1.67
HTA1	YDR225W	TRS33	Q99394	268 aa		4.62	□□□□□ -1.67
HTA1	YDR225W	YFL034W	P43564	1073 aa		4.61	□□□□□ -1.67
HTA1	YDR225W	ALD4	P46367	519 aa	Known RBP	4.61	□□□□□ -1.67
HTA1	YDR225W	DOS2	P54858	310 aa		4.61	□□□□□ -1.67
HTA1	YDR225W	FPR4	Q06205	392 aa	Predicted RBP	4.61	□□□□□ -1.67
HTA1	YDR225W	JIP5	Q06214	492 aa	Predicted RBP	4.61	□□□□□ -1.67
HTA1	YDR225W	MAG2	Q06436	670 aa	Known RBP	4.61	□□□□□ -1.67
HTA1	YDR225W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
HTA1	YDR225W	LSO1	Q3E827	93 aa		4.61	□□□□□ -1.67
HTA1	YDR225W	AFT1	P22149	690 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	KIP2	P28743	706 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	SUV3	P32580	737 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	IXR1	P33417	597 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	MET1	P36150	593 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	HAL5	P38970	855 aa	Known RBP	4.6	□□□□□ -1.67
HTA1	YDR225W	HST3	P53687	447 aa		4.6	□□□□□ -1.67
HTA1	YDR225W	MIP1	P15801	1254 aa		4.59	□□□□□ -1.67
HTA1	YDR225W	VAC17	P25591	423 aa		4.59	□□□□□ -1.67
HTA1	YDR225W	SPC42	P36094	363 aa		4.59	□□□□□ -1.67
HTA1	YDR225W	ISR1	Q06098	443 aa	Known RBP	4.59	□□□□□ -1.67
HTA1	YDR225W	NTH2	P35172	780 aa		4.58	□□□□□ -1.68
HTA1	YDR225W	BOI1	P38041	980 aa	Known RBP	4.58	□□□□□ -1.68
HTA1	YDR225W	AIM9	P40053	627 aa	Known RBP	4.58	□□□□□ -1.68
HTA1	YDR225W	HDA3	Q06623	655 aa		4.58	□□□□□ -1.68
HTA1	YDR225W	MNL2	Q12205	849 aa		4.58	□□□□□ -1.68
HTA1	YDR225W	UBP1	P25037	809 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	NMD2	P38798	1089 aa	Known RBP	4.57	□□□□□ -1.68
HTA1	YDR225W	FYV10	P40492	516 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	SPR3	P41901	512 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	CWH41	P53008	833 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	YAF9	P53930	226 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	TRS120	Q04183	1289 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	YOL098C	Q12496	1037 aa		4.57	□□□□□ -1.68
HTA1	YDR225W	PHO4	P07270	312 aa	Known RBP	4.56	□□□□□ -1.68
HTA1	YDR225W	GAR1	P28007	205 aa	Known RBP	4.56	□□□□□ -1.68
HTA1	YDR225W	MET22	P32179	357 aa		4.56	□□□□□ -1.68
HTA1	YDR225W	YJR115W	P47152	169 aa		4.56	□□□□□ -1.68
HTA1	YDR225W	GPI13	Q07830	1017 aa		4.56	□□□□□ -1.68
HTA1	YDR225W	CYT1	P07143	309 aa		4.55	□□□□□ -1.68
HTA1	YDR225W	MCM2	P29469	868 aa		4.55	□□□□□ -1.68
HTA1	YDR225W	NGR1	P32831	672 aa	Known RBP	4.55	□□□□□ -1.68
HTA1	YDR225W	YBR197C	P38306	217 aa		4.55	□□□□□ -1.68
HTA1	YDR225W	VAC8	P39968	578 aa		4.55	□□□□□ -1.68
HTA1	YDR225W	ATG20	Q07528	640 aa		4.55	□□□□□ -1.68
HTA1	YDR225W	SPT2	P06843	333 aa	Predicted RBP	4.54	□□□□□ -1.68
HTA1	YDR225W	RPS6A	P0CX37	236 aa	Known RBP	4.54	□□□□□ -1.68
HTA1	YDR225W	RPS6B	P0CX38	236 aa	Predicted RBP	4.54	□□□□□ -1.68
HTA1	YDR225W	MRT4	P33201	236 aa	Known RBP	4.54	□□□□□ -1.68
HTA1	YDR225W	FAR11	P53917	953 aa		4.54	□□□□□ -1.68
HTA1	YDR225W	ALD3	P54114	506 aa		4.54	□□□□□ -1.68
HTA1	YDR225W	UGA3	P26370	528 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	ISC10	P32645	267 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	RPT1	P33299	467 aa	Known RBP	4.53	□□□□□ -1.68
HTA1	YDR225W	MSB3	P48566	633 aa	Predicted RBP	4.53	□□□□□ -1.68
HTA1	YDR225W	RNH70	P53331	553 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	APP1	P53933	587 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	ALD6	P54115	500 aa	Known RBP	4.53	□□□□□ -1.68
HTA1	YDR225W	RMD1	Q03441	430 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	SPR28	Q04921	423 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	APC11	Q12157	165 aa		4.53	□□□□□ -1.68
HTA1	YDR225W	SWI5	P08153	709 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	RGA1	P39083	1007 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	MAD1	P40957	749 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	DAK2	P43550	591 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	UFD2	P54860	961 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	VPS16	Q03308	798 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	YDR444W	Q04093	687 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	PIN2	Q12057	282 aa		4.52	□□□□□ -1.69
HTA1	YDR225W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
HTA1	YDR225W	SRP40	P32583	406 aa	Predicted RBP	4.51	□□□□□ -1.69
HTA1	YDR225W	CAB1	Q04430	367 aa		4.51	□□□□□ -1.69
HTA1	YDR225W	RPB10	P22139	70 aa		4.5	□□□□□ -1.69
HTA1	YDR225W	GCD6	P32501	712 aa	Known RBP	4.5	□□□□□ -1.69
HTA1	YDR225W	PEP7	P32609	515 aa		4.5	□□□□□ -1.69
HTA1	YDR225W	VPS35	P34110	944 aa		4.5	□□□□□ -1.69
HTA1	YDR225W	PTK2	P47116	818 aa	Known RBP	4.5	□□□□□ -1.69
HTA1	YDR225W	FOX2	Q02207	900 aa	Known RBP	4.5	□□□□□ -1.69
HTA1	YDR225W	LCB5	Q06147	687 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms