RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C ARL1P38116 183 aaKnown RBP7.5□□□□□ -1.21
VPS61YDR136C YNG2P38806 282 aaKnown RBP7.5□□□□□ -1.21
VPS61YDR136C ULI1P43604 169 aa7.5□□□□□ -1.21
VPS61YDR136C TCB2P48231 1178 aa7.5□□□□□ -1.21
VPS61YDR136C SPO1P53541 631 aa7.5□□□□□ -1.21
VPS61YDR136C CSI1Q04368 295 aa7.5□□□□□ -1.21
VPS61YDR136C NUP145P49687 1317 aa7.5□□□□□ -1.21
VPS61YDR136C NOT3P06102 836 aaKnown RBP7.49□□□□□ -1.21
VPS61YDR136C REF2P42073 533 aaPredicted RBP7.49□□□□□ -1.21
VPS61YDR136C GCR2Q01722 534 aa7.49□□□□□ -1.21
VPS61YDR136C DLD1P32891 587 aa7.48□□□□□ -1.21
VPS61YDR136C NMD2P38798 1089 aaKnown RBP7.48□□□□□ -1.21
VPS61YDR136C TEA1P47988 759 aa7.48□□□□□ -1.21
VPS61YDR136C KNS1P32350 737 aaPredicted RBP7.47□□□□□ -1.21
VPS61YDR136C YGR273CP53329 174 aa7.47□□□□□ -1.21
VPS61YDR136C HAP5Q02516 242 aa7.47□□□□□ -1.21
VPS61YDR136C SPB4P25808 606 aaPredicted RBP7.46□□□□□ -1.22
VPS61YDR136C BMS1Q08965 1183 aaKnown RBP7.46□□□□□ -1.22
VPS61YDR136C COQ4O13525 335 aa7.45□□□□□ -1.22
VPS61YDR136C PBS2P08018 668 aa7.45□□□□□ -1.22
VPS61YDR136C CDC16P09798 840 aa7.45□□□□□ -1.22
VPS61YDR136C GCD7P32502 381 aaPredicted RBP7.45□□□□□ -1.22
VPS61YDR136C MNN4P36044 1178 aa7.45□□□□□ -1.22
VPS61YDR136C BRN1P38170 754 aa7.45□□□□□ -1.22
VPS61YDR136C YBR287WP38355 427 aa7.45□□□□□ -1.22
VPS61YDR136C YEL023CP39992 682 aa7.45□□□□□ -1.22
VPS61YDR136C CTF4Q01454 927 aa7.45□□□□□ -1.22
VPS61YDR136C JIP4Q03361 876 aa7.45□□□□□ -1.22
VPS61YDR136C AOS1Q06624 347 aa7.45□□□□□ -1.22
VPS61YDR136C RFC1P38630 861 aaKnown RBP7.44□□□□□ -1.22
VPS61YDR136C HGH1P48362 394 aaKnown RBP7.44□□□□□ -1.22
VPS61YDR136C IOC2Q12072 812 aa7.44□□□□□ -1.22
VPS61YDR136C UGA3P26370 528 aa7.43□□□□□ -1.22
VPS61YDR136C HSP104P31539 908 aaKnown RBP7.43□□□□□ -1.22
VPS61YDR136C RAD24P32641 659 aa7.43□□□□□ -1.22
VPS61YDR136C SOL3P38858 249 aa7.43□□□□□ -1.22
VPS61YDR136C COG8Q04632 607 aa7.43□□□□□ -1.22
VPS61YDR136C RNR2P09938 399 aaKnown RBP7.42□□□□□ -1.22
VPS61YDR136C PTC4P38089 393 aa7.42□□□□□ -1.22
VPS61YDR136C BDH2P39713 417 aa7.42□□□□□ -1.22
VPS61YDR136C HXT13P39924 564 aa7.42□□□□□ -1.22
VPS61YDR136C NPA3P47122 385 aa7.42□□□□□ -1.22
VPS61YDR136C NSE3Q05541 303 aa7.42□□□□□ -1.22
VPS61YDR136C LDB19Q12502 818 aa7.42□□□□□ -1.22
VPS61YDR136C AI4P03878 556 aa7.41□□□□□ -1.22
VPS61YDR136C DSF2P38213 736 aa7.41□□□□□ -1.22
VPS61YDR136C VHR2P40041 505 aa7.41□□□□□ -1.22
VPS61YDR136C PIL1P53252 339 aaKnown RBP7.41□□□□□ -1.22
VPS61YDR136C YOL057WQ08225 711 aa7.41□□□□□ -1.22
VPS61YDR136C MPH3P0CE00 602 aa7.4□□□□□ -1.22
VPS61YDR136C MRP7P12687 371 aa7.4□□□□□ -1.22
VPS61YDR136C BOI2P39969 1040 aa7.4□□□□□ -1.22
VPS61YDR136C HXT17P53631 564 aa7.4□□□□□ -1.22
VPS61YDR136C HST1P53685 503 aa7.4□□□□□ -1.22
VPS61YDR136C YNL035CP53962 389 aaKnown RBP7.4□□□□□ -1.22
VPS61YDR136C YDR306CQ06640 478 aa7.4□□□□□ -1.22
VPS61YDR136C NOP8Q08287 484 aaPredicted RBP7.4□□□□□ -1.22
VPS61YDR136C UBP14P38237 781 aaKnown RBP7.39□□□□□ -1.23
VPS61YDR136C YGR122WP53272 402 aa7.39□□□□□ -1.23
VPS61YDR136C VPS20Q04272 221 aa7.39□□□□□ -1.23
VPS61YDR136C YLR326WQ06170 240 aaKnown RBP7.39□□□□□ -1.23
VPS61YDR136C KEX1P09620 729 aa7.38□□□□□ -1.23
VPS61YDR136C KCC4P25389 1037 aa7.38□□□□□ -1.23
VPS61YDR136C RKM3P38222 552 aa7.38□□□□□ -1.23
VPS61YDR136C HYR1P40581 163 aaKnown RBP7.38□□□□□ -1.23
VPS61YDR136C CIR1P42940 261 aa7.38□□□□□ -1.23
VPS61YDR136C CTR9P89105 1077 aa7.38□□□□□ -1.23
VPS61YDR136C YMR196WQ04336 1088 aa7.38□□□□□ -1.23
VPS61YDR136C LCD1Q04377 747 aa7.38□□□□□ -1.23
VPS61YDR136C AIM44Q99299 758 aa7.38□□□□□ -1.23
VPS61YDR136C COX6P00427 148 aa7.37□□□□□ -1.23
VPS61YDR136C VAS1P07806 1104 aaKnown RBP7.37□□□□□ -1.23
VPS61YDR136C TRL1P09880 827 aaKnown RBP7.37□□□□□ -1.23
VPS61YDR136C SEC61P32915 480 aa7.37□□□□□ -1.23
VPS61YDR136C KIC1P38692 1080 aa7.37□□□□□ -1.23
VPS61YDR136C RSC1P53236 928 aa7.37□□□□□ -1.23
VPS61YDR136C HRQ1Q05549 1077 aa7.37□□□□□ -1.23
VPS61YDR136C SLM3Q12093 417 aa7.37□□□□□ -1.23
VPS61YDR136C BIK1P11709 440 aa7.36□□□□□ -1.23
VPS61YDR136C RAD4P14736 754 aa7.36□□□□□ -1.23
VPS61YDR136C RPN12P32496 274 aa7.36□□□□□ -1.23
VPS61YDR136C RTG1P32607 177 aa7.36□□□□□ -1.23
VPS61YDR136C RAD54P32863 898 aa7.36□□□□□ -1.23
VPS61YDR136C RVS167P39743 482 aaKnown RBP7.36□□□□□ -1.23
VPS61YDR136C BDP1P46678 594 aa7.36□□□□□ -1.23
VPS61YDR136C KRE33P53914 1056 aaKnown RBP7.36□□□□□ -1.23
VPS61YDR136C MAM3Q12296 706 aa7.36□□□□□ -1.23
VPS61YDR136C DAN4P47179 1161 aa7.35□□□□□ -1.23
VPS61YDR136C PRP5P21372 849 aaPredicted RBP7.34□□□□□ -1.23
VPS61YDR136C SWC3P31376 625 aa7.34□□□□□ -1.23
VPS61YDR136C TFG1P41895 735 aaPredicted RBP7.34□□□□□ -1.23
VPS61YDR136C YDR090CQ03193 310 aa7.34□□□□□ -1.23
VPS61YDR136C YRF1-3P0CX14 1859 aa7.33□□□□□ -1.24
VPS61YDR136C YRF1-7P0CX15 1859 aa7.33□□□□□ -1.24
VPS61YDR136C YRF1-6P53819 1859 aa7.33□□□□□ -1.24
VPS61YDR136C ECM21P38167 1117 aaKnown RBP7.33□□□□□ -1.24
VPS61YDR136C MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
VPS61YDR136C INP54Q08227 384 aaKnown RBP7.33□□□□□ -1.24
VPS61YDR136C RSF2P46974 1380 aa7.33□□□□□ -1.24
VPS61YDR136C SWI1P09547 1314 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms