RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C BIO2P32451 375 aa7.65□□□□□ -1.18
CDC34YDR054C SPC42P36094 363 aa7.65□□□□□ -1.18
CDC34YDR054C KIC1P38692 1080 aa7.65□□□□□ -1.18
CDC34YDR054C DOT5P40553 215 aa7.65□□□□□ -1.18
CDC34YDR054C NUP145P49687 1317 aa7.65□□□□□ -1.18
CDC34YDR054C FRK1Q03002 865 aaPredicted RBP7.65□□□□□ -1.18
CDC34YDR054C VHR2P40041 505 aa7.64□□□□□ -1.19
CDC34YDR054C YNL050CP53952 270 aa7.64□□□□□ -1.19
CDC34YDR054C FOX2Q02207 900 aaKnown RBP7.64□□□□□ -1.19
CDC34YDR054C AOS1Q06624 347 aa7.64□□□□□ -1.19
CDC34YDR054C FKS3Q04952 1785 aa7.64□□□□□ -1.19
CDC34YDR054C ROM2P51862 1356 aaKnown RBP7.63□□□□□ -1.19
CDC34YDR054C OCA5P38738 679 aa7.63□□□□□ -1.19
CDC34YDR054C STM1P39015 273 aaKnown RBP7.63□□□□□ -1.19
CDC34YDR054C YMR1P47147 688 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
CDC34YDR054C FPR4Q06205 392 aaPredicted RBP7.63□□□□□ -1.19
CDC34YDR054C YBR287WP38355 427 aa7.62□□□□□ -1.19
CDC34YDR054C RRT14P40470 206 aa7.62□□□□□ -1.19
CDC34YDR054C CTF4Q01454 927 aa7.62□□□□□ -1.19
CDC34YDR054C MEC3Q02574 474 aa7.62□□□□□ -1.19
CDC34YDR054C YDR090CQ03193 310 aa7.62□□□□□ -1.19
CDC34YDR054C COBP00163 385 aa7.61□□□□□ -1.19
CDC34YDR054C OSM1P21375 501 aaKnown RBP7.61□□□□□ -1.19
CDC34YDR054C SEC20P28791 383 aa7.61□□□□□ -1.19
CDC34YDR054C SIS2P36024 562 aa7.61□□□□□ -1.19
CDC34YDR054C ZDS1P50111 915 aaKnown RBP7.61□□□□□ -1.19
CDC34YDR054C SCY1P53009 804 aa7.61□□□□□ -1.19
CDC34YDR054C YRB30P53107 440 aaPredicted RBP7.61□□□□□ -1.19
CDC34YDR054C FAR11P53917 953 aa7.61□□□□□ -1.19
CDC34YDR054C YML083CQ04526 418 aa7.61□□□□□ -1.19
CDC34YDR054C KCC4P25389 1037 aa7.6□□□□□ -1.19
CDC34YDR054C KTR1P27810 393 aaKnown RBP7.6□□□□□ -1.19
CDC34YDR054C PTC3P34221 468 aaKnown RBP7.6□□□□□ -1.19
CDC34YDR054C TEA1P47988 759 aa7.6□□□□□ -1.19
CDC34YDR054C YNL108CP53929 270 aa7.6□□□□□ -1.19
CDC34YDR054C ALE1Q08548 619 aa7.6□□□□□ -1.19
CDC34YDR054C COQ4O13525 335 aa7.59□□□□□ -1.19
CDC34YDR054C PUP1P25043 261 aa7.59□□□□□ -1.19
CDC34YDR054C YKR075CP36155 307 aa7.59□□□□□ -1.19
CDC34YDR054C GYP7P48365 746 aa7.59□□□□□ -1.19
CDC34YDR054C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
CDC34YDR054C ATG13Q06628 738 aa7.59□□□□□ -1.19
CDC34YDR054C DAL5P15365 543 aa7.58□□□□□ -1.2
CDC34YDR054C STS1P38637 319 aa7.58□□□□□ -1.2
CDC34YDR054C RPN11P43588 306 aaKnown RBP7.58□□□□□ -1.2
CDC34YDR054C NNF1P47149 201 aa7.58□□□□□ -1.2
CDC34YDR054C TYW1Q08960 810 aaKnown RBP7.58□□□□□ -1.2
CDC34YDR054C BMS1Q08965 1183 aaKnown RBP7.58□□□□□ -1.2
CDC34YDR054C UGA3P26370 528 aa7.57□□□□□ -1.2
CDC34YDR054C MAM1P40065 302 aa7.57□□□□□ -1.2
CDC34YDR054C YIL092WP40497 633 aa7.57□□□□□ -1.2
CDC34YDR054C SRT1Q03175 343 aa7.57□□□□□ -1.2
CDC34YDR054C YMR074CQ04773 145 aa7.57□□□□□ -1.2
CDC34YDR054C NUG1P40010 520 aaKnown RBP7.56□□□□□ -1.2
CDC34YDR054C YBP2P53169 641 aa7.56□□□□□ -1.2
CDC34YDR054C NSE3Q05541 303 aa7.56□□□□□ -1.2
CDC34YDR054C YAF9P53930 226 aa7.55□□□□□ -1.2
CDC34YDR054C TUM1Q08686 304 aaKnown RBP7.55□□□□□ -1.2
CDC34YDR054C EDE1P34216 1381 aa7.55□□□□□ -1.2
CDC34YDR054C NMD2P38798 1089 aaKnown RBP7.54□□□□□ -1.2
CDC34YDR054C NPR2P39923 615 aa7.54□□□□□ -1.2
CDC34YDR054C ALD2P47771 506 aa7.54□□□□□ -1.2
CDC34YDR054C RTS3P53289 263 aa7.54□□□□□ -1.2
CDC34YDR054C ZDS2P54786 942 aa7.54□□□□□ -1.2
CDC34YDR054C SVF1Q05515 481 aa7.54□□□□□ -1.2
CDC34YDR054C YLR326WQ06170 240 aaKnown RBP7.54□□□□□ -1.2
CDC34YDR054C LAM6Q08001 693 aa7.54□□□□□ -1.2
CDC34YDR054C YRF1-3P0CX14 1859 aa7.53□□□□□ -1.2
CDC34YDR054C YRF1-7P0CX15 1859 aa7.53□□□□□ -1.2
CDC34YDR054C YRF1-6P53819 1859 aa7.53□□□□□ -1.2
CDC34YDR054C RAD2P07276 1031 aa7.53□□□□□ -1.2
CDC34YDR054C KEX1P09620 729 aa7.53□□□□□ -1.2
CDC34YDR054C RAD4P14736 754 aa7.53□□□□□ -1.2
CDC34YDR054C DBP1P24784 617 aaKnown RBP7.53□□□□□ -1.2
CDC34YDR054C SUB1P54000 292 aaKnown RBP7.53□□□□□ -1.2
CDC34YDR054C RMT2Q03305 412 aa7.53□□□□□ -1.2
CDC34YDR054C LYS2P07702 1392 aa7.53□□□□□ -1.2
CDC34YDR054C BUD31P25337 157 aaPredicted RBP7.52□□□□□ -1.21
CDC34YDR054C YGR122WP53272 402 aa7.52□□□□□ -1.21
CDC34YDR054C YOL057WQ08225 711 aa7.52□□□□□ -1.21
CDC34YDR054C RAD59Q12223 238 aa7.52□□□□□ -1.21
CDC34YDR054C YBL113CQ7M4S9 792 aa7.52□□□□□ -1.21
CDC34YDR054C ENO1P00924 437 aaKnown RBP7.51□□□□□ -1.21
CDC34YDR054C SUP45P12385 437 aaKnown RBP7.51□□□□□ -1.21
CDC34YDR054C RAD54P32863 898 aa7.51□□□□□ -1.21
CDC34YDR054C PRP40P33203 583 aaKnown RBP7.51□□□□□ -1.21
CDC34YDR054C PKH3Q03306 898 aaPredicted RBP7.51□□□□□ -1.21
CDC34YDR054C TRP5P00931 707 aaKnown RBP7.5□□□□□ -1.21
CDC34YDR054C GRX1P25373 110 aaKnown RBP7.5□□□□□ -1.21
CDC34YDR054C CLB5P30283 435 aa7.5□□□□□ -1.21
CDC34YDR054C RAD24P32641 659 aa7.5□□□□□ -1.21
CDC34YDR054C TGL4P36165 910 aa7.5□□□□□ -1.21
CDC34YDR054C NOP2P40991 618 aaKnown RBP7.5□□□□□ -1.21
CDC34YDR054C CSI1Q04368 295 aa7.5□□□□□ -1.21
CDC34YDR054C SLX5P32828 619 aaKnown RBP7.49□□□□□ -1.21
CDC34YDR054C APL2P36000 726 aaPredicted RBP7.49□□□□□ -1.21
CDC34YDR054C ILV3P39522 585 aaKnown RBP7.49□□□□□ -1.21
CDC34YDR054C CST6P40535 587 aa7.49□□□□□ -1.21
CDC34YDR054C BUD27P43573 796 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
CDC34YDR054C YPP1P46951 817 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms