RNA–Protein interactions for RNA: ENST00000641547.1

CASC19-239, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 915 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-239ENST00000641547 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CASC19-239ENST00000641547 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
CASC19-239ENST00000641547 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-239ENST00000641547 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CASC19-239ENST00000641547 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CASC19-239ENST00000641547 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CASC19-239ENST00000641547 EYA1Q99502 592 aa12.26□□□□□ -0.45
CASC19-239ENST00000641547 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
CASC19-239ENST00000641547 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
CASC19-239ENST00000641547 Q6ZNB5 142 aa12.25□□□□□ -0.45
CASC19-239ENST00000641547 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
CASC19-239ENST00000641547 CFTRP13569 1480 aa12.24□□□□□ -0.45
CASC19-239ENST00000641547 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
CASC19-239ENST00000641547 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CASC19-239ENST00000641547 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
CASC19-239ENST00000641547 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
CASC19-239ENST00000641547 LCE2BO14633 110 aa12.22□□□□□ -0.45
CASC19-239ENST00000641547 RNF40O75150 1001 aa12.22□□□□□ -0.45
CASC19-239ENST00000641547 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
CASC19-239ENST00000641547 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CASC19-239ENST00000641547 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CASC19-239ENST00000641547 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
CASC19-239ENST00000641547 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
CASC19-239ENST00000641547 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
CASC19-239ENST00000641547 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CASC19-239ENST00000641547 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CASC19-239ENST00000641547 GFRA3O60609 400 aa12.16□□□□□ -0.46
CASC19-239ENST00000641547 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
CASC19-239ENST00000641547 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CASC19-239ENST00000641547 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
CASC19-239ENST00000641547 KIF21BO75037 1637 aa12.13□□□□□ -0.47
CASC19-239ENST00000641547 ZPR1O75312 459 aa12.13□□□□□ -0.47
CASC19-239ENST00000641547 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CASC19-239ENST00000641547 SOGA1O94964 1423 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 COPS2P61201 443 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
CASC19-239ENST00000641547 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CASC19-239ENST00000641547 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CASC19-239ENST00000641547 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CASC19-239ENST00000641547 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-239ENST00000641547 GGCXP38435 758 aa12.09□□□□□ -0.47
CASC19-239ENST00000641547 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
CASC19-239ENST00000641547 CUX1P39880 1505 aa12.08□□□□□ -0.48
CASC19-239ENST00000641547 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-239ENST00000641547 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
CASC19-239ENST00000641547 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CASC19-239ENST00000641547 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
CASC19-239ENST00000641547 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
CASC19-239ENST00000641547 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CASC19-239ENST00000641547 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CASC19-239ENST00000641547 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
CASC19-239ENST00000641547 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-239ENST00000641547 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
CASC19-239ENST00000641547 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-239ENST00000641547 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-239ENST00000641547 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
CASC19-239ENST00000641547 NUTM2FA1L443 756 aa12□□□□□ -0.49
CASC19-239ENST00000641547 FCHSD2O94868 740 aa12□□□□□ -0.49
CASC19-239ENST00000641547 FAM161AQ3B820 660 aa12□□□□□ -0.49
CASC19-239ENST00000641547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CASC19-239ENST00000641547 TLL1O43897 1013 aa11.99□□□□□ -0.49
CASC19-239ENST00000641547 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CASC19-239ENST00000641547 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CASC19-239ENST00000641547 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-239ENST00000641547 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CASC19-239ENST00000641547 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CASC19-239ENST00000641547 CFHP08603 1231 aa11.98□□□□□ -0.49
CASC19-239ENST00000641547 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CASC19-239ENST00000641547 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
CASC19-239ENST00000641547 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
CASC19-239ENST00000641547 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
CASC19-239ENST00000641547 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
CASC19-239ENST00000641547 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
CASC19-239ENST00000641547 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
CASC19-239ENST00000641547 OATP04181 439 aa11.94□□□□□ -0.5
CASC19-239ENST00000641547 SLC19A1P41440 591 aa11.94□□□□□ -0.5
CASC19-239ENST00000641547 HIC1Q14526 733 aa11.92□□□□□ -0.5
CASC19-239ENST00000641547 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CASC19-239ENST00000641547 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CASC19-239ENST00000641547 S1PR4O95977 384 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 ADH1BP00325 375 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 PRR20EP86478 221 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 PRR20CP86479 221 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 PRR20DP86480 221 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 PRR20BP86481 221 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 PRR20AP86496 221 aa11.91□□□□□ -0.5
CASC19-239ENST00000641547 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CASC19-239ENST00000641547 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CASC19-239ENST00000641547 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
CASC19-239ENST00000641547 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
CASC19-239ENST00000641547 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
CASC19-239ENST00000641547 NR1I2O75469 434 aa11.89□□□□□ -0.51
CASC19-239ENST00000641547 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
CASC19-239ENST00000641547 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CASC19-239ENST00000641547 GPR37O15354 613 aa11.88□□□□□ -0.51
CASC19-239ENST00000641547 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CASC19-239ENST00000641547 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms