RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 KIF1BO60333 1816 aa26.59■■□□□ 1.85
PTPN11-207ENST00000639857 CLTCL1P53675 1640 aa26.58■■□□□ 1.85
PTPN11-207ENST00000639857 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.85
PTPN11-207ENST00000639857 NWD1Q149M9 1564 aa26.58■■□□□ 1.85
PTPN11-207ENST00000639857 DIP2AQ14689 1571 aa26.57■■□□□ 1.84
PTPN11-207ENST00000639857 UBAP1LF5GYI3 381 aa26.56■■□□□ 1.84
PTPN11-207ENST00000639857 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
PTPN11-207ENST00000639857 XIRP1Q702N8 1843 aaKnown RBP26.55■■□□□ 1.84
PTPN11-207ENST00000639857 CHGAP10645 457 aaKnown RBP26.54■■□□□ 1.84
PTPN11-207ENST00000639857 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
PTPN11-207ENST00000639857 NKTRP30414 1462 aaKnown RBP26.53■■□□□ 1.84
PTPN11-207ENST00000639857 CHD2O14647 1828 aaKnown RBP26.53■■□□□ 1.84
PTPN11-207ENST00000639857 TOM1O60784 492 aa26.51■■□□□ 1.83
PTPN11-207ENST00000639857 SLC4A1APQ9BWU0 796 aaKnown RBP26.51■■□□□ 1.83
PTPN11-207ENST00000639857 KCNA6P17658 529 aa26.49■■□□□ 1.83
PTPN11-207ENST00000639857 SLC26A8Q96RN1 970 aa26.49■■□□□ 1.83
PTPN11-207ENST00000639857 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
PTPN11-207ENST00000639857 BCANQ96GW7 911 aa26.46■■□□□ 1.83
PTPN11-207ENST00000639857 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
PTPN11-207ENST00000639857 SETBP1Q9Y6X0 1596 aa26.46■■□□□ 1.83
PTPN11-207ENST00000639857 NEXMIFQ5QGS0 1516 aa26.45■■□□□ 1.83
PTPN11-207ENST00000639857 TBX22Q9Y458 520 aa26.45■■□□□ 1.82
PTPN11-207ENST00000639857 ADAMTS13Q76LX8 1427 aa26.45■■□□□ 1.82
PTPN11-207ENST00000639857 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
PTPN11-207ENST00000639857 NRXN3Q9Y4C0 1643 aa26.43■■□□□ 1.82
PTPN11-207ENST00000639857 ZNF326Q5BKZ1 582 aaKnown RBP26.39■■□□□ 1.82
PTPN11-207ENST00000639857 TMEM94Q12767 1356 aa26.38■■□□□ 1.81
PTPN11-207ENST00000639857 MPHOSPH9Q99550 1183 aa26.37■■□□□ 1.81
PTPN11-207ENST00000639857 PPLO60437 1756 aa26.37■■□□□ 1.81
PTPN11-207ENST00000639857 NUTM2DQ5VT03 806 aaPredicted RBP26.36■■□□□ 1.81
PTPN11-207ENST00000639857 CCDC144AA2RUR9 1427 aa26.35■■□□□ 1.81
PTPN11-207ENST00000639857 NCOA3Q9Y6Q9 1424 aa26.35■■□□□ 1.81
PTPN11-207ENST00000639857 RAB3GAP2Q9H2M9 1393 aa26.34■■□□□ 1.81
PTPN11-207ENST00000639857 PROSER2Q86WR7 435 aaPredicted RBP26.34■■□□□ 1.81
PTPN11-207ENST00000639857 RPGRIP1LQ68CZ1 1315 aa26.34■■□□□ 1.81
PTPN11-207ENST00000639857 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
PTPN11-207ENST00000639857 PIP4K2BP78356 416 aa26.33■■□□□ 1.81
PTPN11-207ENST00000639857 SCAF1Q9H7N4 1312 aaKnown RBP26.32■■□□□ 1.8
PTPN11-207ENST00000639857 SETD1AO15047 1707 aaKnown RBP26.29■■□□□ 1.8
PTPN11-207ENST00000639857 IFT172Q9UG01 1749 aa26.29■■□□□ 1.8
PTPN11-207ENST00000639857 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
PTPN11-207ENST00000639857 VGFO15240 615 aaPredicted RBP26.28■■□□□ 1.8
PTPN11-207ENST00000639857 MSH6P52701 1360 aa26.28■■□□□ 1.8
PTPN11-207ENST00000639857 FOXD1Q16676 465 aa26.27■■□□□ 1.8
PTPN11-207ENST00000639857 SPATA31E1Q6ZUB1 1445 aa26.26■■□□□ 1.79
PTPN11-207ENST00000639857 HRCP23327 699 aa26.26■■□□□ 1.79
PTPN11-207ENST00000639857 PTPRUQ92729 1446 aa26.25■■□□□ 1.79
PTPN11-207ENST00000639857 HSPA1LP34931 641 aa26.24■■□□□ 1.79
PTPN11-207ENST00000639857 FAM135BQ49AJ0 1406 aa26.23■■□□□ 1.79
PTPN11-207ENST00000639857 AMOTL2Q9Y2J4 779 aa26.21■■□□□ 1.79
PTPN11-207ENST00000639857 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.21■■□□□ 1.79
PTPN11-207ENST00000639857 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
PTPN11-207ENST00000639857 METP08581 1390 aa26.2■■□□□ 1.79
PTPN11-207ENST00000639857 ANKRD30BQ9BXX2 1392 aa26.2■■□□□ 1.78
PTPN11-207ENST00000639857 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
PTPN11-207ENST00000639857 RBM33Q96EV2 1170 aaKnown RBP26.18■■□□□ 1.78
PTPN11-207ENST00000639857 DCCP43146 1447 aa26.17■■□□□ 1.78
PTPN11-207ENST00000639857 PTCH1Q13635 1447 aa26.14■■□□□ 1.78
PTPN11-207ENST00000639857 C19orf44Q9H6X5 657 aa26.14■■□□□ 1.78
PTPN11-207ENST00000639857 C14orf37Q86TY3 774 aa26.12■■□□□ 1.77
PTPN11-207ENST00000639857 CADPS2Q86UW7 1296 aa26.12■■□□□ 1.77
PTPN11-207ENST00000639857 NALCNQ8IZF0 1738 aa26.11■■□□□ 1.77
PTPN11-207ENST00000639857 DISP3Q9P2K9 1392 aa26.1■■□□□ 1.77
PTPN11-207ENST00000639857 SLAIN2Q9P270 581 aa26.1■■□□□ 1.77
PTPN11-207ENST00000639857 MYOM2P54296 1465 aa26.1■■□□□ 1.77
PTPN11-207ENST00000639857 LAMC1P11047 1609 aa26.1■■□□□ 1.77
PTPN11-207ENST00000639857 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
PTPN11-207ENST00000639857 PIK3C2GO75747 1445 aa26.09■■□□□ 1.77
PTPN11-207ENST00000639857 RGL3Q3MIN7 710 aa26.09■■□□□ 1.77
PTPN11-207ENST00000639857 ADGRL3Q9HAR2 1447 aa26.08■■□□□ 1.77
PTPN11-207ENST00000639857 ATF3P18847 181 aa26.07■■□□□ 1.76
PTPN11-207ENST00000639857 ADGRF5Q8IZF2 1346 aa26.07■■□□□ 1.76
PTPN11-207ENST00000639857 NRXN1Q9ULB1 1477 aa26.06■■□□□ 1.76
PTPN11-207ENST00000639857 KNDC1Q76NI1 1749 aa26.06■■□□□ 1.76
PTPN11-207ENST00000639857 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
PTPN11-207ENST00000639857 TECPR2O15040 1411 aa26.02■■□□□ 1.76
PTPN11-207ENST00000639857 AHDC1Q5TGY3 1603 aaPredicted RBP26.02■■□□□ 1.76
PTPN11-207ENST00000639857 ASXL1Q8IXJ9 1541 aa26■■□□□ 1.75
PTPN11-207ENST00000639857 ROBO2Q9HCK4 1378 aa26■■□□□ 1.75
PTPN11-207ENST00000639857 COL16A1Q07092 1604 aaPredicted RBP25.99■■□□□ 1.75
PTPN11-207ENST00000639857 MST1RQ04912 1400 aa25.99■■□□□ 1.75
PTPN11-207ENST00000639857 LRPPRCP42704 1394 aaKnown RBP25.96■■□□□ 1.75
PTPN11-207ENST00000639857 STAC3Q96MF2 364 aa25.95■■□□□ 1.74
PTPN11-207ENST00000639857 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
PTPN11-207ENST00000639857 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.74
PTPN11-207ENST00000639857 ABCC11Q96J66 1382 aa25.95■■□□□ 1.74
PTPN11-207ENST00000639857 C14orf93Q9H972 538 aaKnown RBP25.93■■□□□ 1.74
PTPN11-207ENST00000639857 YTHDC2Q9H6S0 1430 aaKnown RBP25.91■■□□□ 1.74
PTPN11-207ENST00000639857 BRINP3Q76B58 766 aa25.9■■□□□ 1.74
PTPN11-207ENST00000639857 JCADQ9P266 1359 aa25.9■■□□□ 1.74
PTPN11-207ENST00000639857 SHPRHQ149N8 1683 aa25.9■■□□□ 1.74
PTPN11-207ENST00000639857 SIRT1Q96EB6 747 aa25.87■■□□□ 1.73
PTPN11-207ENST00000639857 C1orf167Q5SNV9 1468 aa25.86■■□□□ 1.73
PTPN11-207ENST00000639857 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
PTPN11-207ENST00000639857 DLC1Q96QB1 1528 aa25.85■■□□□ 1.73
PTPN11-207ENST00000639857 ADGRB1O14514 1584 aa25.85■■□□□ 1.73
PTPN11-207ENST00000639857 TMEM132EQ6IEE7 984 aa25.84■■□□□ 1.73
PTPN11-207ENST00000639857 CFAP70Q5T0N1 1121 aa25.83■■□□□ 1.73
PTPN11-207ENST00000639857 STK26Q9P289 416 aa25.83■■□□□ 1.73
PTPN11-207ENST00000639857 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms