RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
CLN6-225ENST00000638144 STRCP1A6NGW2 1772 aa18.63■□□□□ 0.57
CLN6-225ENST00000638144 KIF1BO60333 1816 aa18.63■□□□□ 0.57
CLN6-225ENST00000638144 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
CLN6-225ENST00000638144 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
CLN6-225ENST00000638144 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.56
CLN6-225ENST00000638144 BCANQ96GW7 911 aa18.58■□□□□ 0.56
CLN6-225ENST00000638144 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
CLN6-225ENST00000638144 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
CLN6-225ENST00000638144 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
CLN6-225ENST00000638144 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
CLN6-225ENST00000638144 CPS1P31327 1500 aa18.54■□□□□ 0.56
CLN6-225ENST00000638144 FBXO41Q8TF61 875 aa18.53■□□□□ 0.56
CLN6-225ENST00000638144 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLN6-225ENST00000638144 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
CLN6-225ENST00000638144 PPLO60437 1756 aa18.5■□□□□ 0.55
CLN6-225ENST00000638144 ADAMTS13Q76LX8 1427 aa18.5■□□□□ 0.55
CLN6-225ENST00000638144 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
CLN6-225ENST00000638144 LRRC7Q96NW7 1537 aa18.49■□□□□ 0.55
CLN6-225ENST00000638144 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
CLN6-225ENST00000638144 XIRP1Q702N8 1843 aaKnown RBP18.48■□□□□ 0.55
CLN6-225ENST00000638144 IQSEC2Q5JU85 1478 aa18.47■□□□□ 0.55
CLN6-225ENST00000638144 RGL3Q3MIN7 710 aa18.47■□□□□ 0.55
CLN6-225ENST00000638144 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
CLN6-225ENST00000638144 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
CLN6-225ENST00000638144 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
CLN6-225ENST00000638144 DIP2AQ14689 1571 aa18.46■□□□□ 0.55
CLN6-225ENST00000638144 SETBP1Q9Y6X0 1596 aa18.46■□□□□ 0.55
CLN6-225ENST00000638144 HRCP23327 699 aa18.45■□□□□ 0.54
CLN6-225ENST00000638144 RBM33Q96EV2 1170 aaKnown RBP18.45■□□□□ 0.54
CLN6-225ENST00000638144 IFT172Q9UG01 1749 aa18.45■□□□□ 0.54
CLN6-225ENST00000638144 ANKRD30BQ9BXX2 1392 aa18.44■□□□□ 0.54
CLN6-225ENST00000638144 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
CLN6-225ENST00000638144 KCNA6P17658 529 aa18.42■□□□□ 0.54
CLN6-225ENST00000638144 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
CLN6-225ENST00000638144 TBX22Q9Y458 520 aa18.41■□□□□ 0.54
CLN6-225ENST00000638144 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
CLN6-225ENST00000638144 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
CLN6-225ENST00000638144 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
CLN6-225ENST00000638144 ALKQ9UM73 1620 aa18.4■□□□□ 0.54
CLN6-225ENST00000638144 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
CLN6-225ENST00000638144 PROSER2Q86WR7 435 aaPredicted RBP18.39■□□□□ 0.53
CLN6-225ENST00000638144 RPGRIP1LQ68CZ1 1315 aa18.39■□□□□ 0.53
CLN6-225ENST00000638144 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
CLN6-225ENST00000638144 METP08581 1390 aa18.39■□□□□ 0.53
CLN6-225ENST00000638144 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
CLN6-225ENST00000638144 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
CLN6-225ENST00000638144 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
CLN6-225ENST00000638144 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
CLN6-225ENST00000638144 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
CLN6-225ENST00000638144 AMOTL2Q9Y2J4 779 aa18.34■□□□□ 0.53
CLN6-225ENST00000638144 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
CLN6-225ENST00000638144 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
CLN6-225ENST00000638144 TOM1O60784 492 aa18.3■□□□□ 0.52
CLN6-225ENST00000638144 MYOM2P54296 1465 aa18.3■□□□□ 0.52
CLN6-225ENST00000638144 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
CLN6-225ENST00000638144 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
CLN6-225ENST00000638144 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
CLN6-225ENST00000638144 NRXN1Q9ULB1 1477 aa18.27■□□□□ 0.52
CLN6-225ENST00000638144 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.27■□□□□ 0.52
CLN6-225ENST00000638144 MSH6P52701 1360 aa18.27■□□□□ 0.51
CLN6-225ENST00000638144 TMEM132EQ6IEE7 984 aa18.26■□□□□ 0.51
CLN6-225ENST00000638144 DCAF11Q8TEB1 546 aa18.26■□□□□ 0.51
CLN6-225ENST00000638144 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
CLN6-225ENST00000638144 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
CLN6-225ENST00000638144 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
CLN6-225ENST00000638144 STK26Q9P289 416 aa18.24■□□□□ 0.51
CLN6-225ENST00000638144 LAMC1P11047 1609 aa18.23■□□□□ 0.51
CLN6-225ENST00000638144 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
CLN6-225ENST00000638144 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
CLN6-225ENST00000638144 HSPA1LP34931 641 aa18.22■□□□□ 0.51
CLN6-225ENST00000638144 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
CLN6-225ENST00000638144 PTCH1Q13635 1447 aa18.22■□□□□ 0.51
CLN6-225ENST00000638144 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
CLN6-225ENST00000638144 KNDC1Q76NI1 1749 aa18.2■□□□□ 0.5
CLN6-225ENST00000638144 YTHDC2Q9H6S0 1430 aaKnown RBP18.19■□□□□ 0.5
CLN6-225ENST00000638144 C14orf93Q9H972 538 aaKnown RBP18.19■□□□□ 0.5
CLN6-225ENST00000638144 ADGRL3Q9HAR2 1447 aa18.19■□□□□ 0.5
CLN6-225ENST00000638144 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
CLN6-225ENST00000638144 LRPPRCP42704 1394 aaKnown RBP18.18■□□□□ 0.5
CLN6-225ENST00000638144 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
CLN6-225ENST00000638144 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
CLN6-225ENST00000638144 C19orf44Q9H6X5 657 aa18.17■□□□□ 0.5
CLN6-225ENST00000638144 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
CLN6-225ENST00000638144 ATF3P18847 181 aa18.16■□□□□ 0.5
CLN6-225ENST00000638144 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
CLN6-225ENST00000638144 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
CLN6-225ENST00000638144 TECPR2O15040 1411 aa18.15■□□□□ 0.5
CLN6-225ENST00000638144 DCCP43146 1447 aa18.14■□□□□ 0.49
CLN6-225ENST00000638144 FAM135BQ49AJ0 1406 aa18.14■□□□□ 0.49
CLN6-225ENST00000638144 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
CLN6-225ENST00000638144 L3MBTL2Q969R5 705 aa18.13■□□□□ 0.49
CLN6-225ENST00000638144 ABCC11Q96J66 1382 aa18.13■□□□□ 0.49
CLN6-225ENST00000638144 MST1RQ04912 1400 aa18.13■□□□□ 0.49
CLN6-225ENST00000638144 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLN6-225ENST00000638144 PHLPP1O60346 1717 aa18.11■□□□□ 0.49
CLN6-225ENST00000638144 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
CLN6-225ENST00000638144 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
CLN6-225ENST00000638144 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
CLN6-225ENST00000638144 PRAM1Q96QH2 718 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms