RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 NACADO15069 1562 aa19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 ANKRD62A6NC57 917 aa19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 ELL2O00472 640 aaPredicted RBP19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 GPS2Q13227 327 aa19.97■□□□□ 0.79
CACNA1A-258ENST00000638029 PKD2Q13563 968 aa19.95■□□□□ 0.78
CACNA1A-258ENST00000638029 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
CACNA1A-258ENST00000638029 ERICH2A1L162 156 aa19.94■□□□□ 0.78
CACNA1A-258ENST00000638029 IPO7O95373 1038 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-258ENST00000638029 ZNF428Q96B54 188 aa19.93■□□□□ 0.78
CACNA1A-258ENST00000638029 TEX35Q5T0J7 233 aa19.93■□□□□ 0.78
CACNA1A-258ENST00000638029 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
CACNA1A-258ENST00000638029 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-258ENST00000638029 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
CACNA1A-258ENST00000638029 TERF2IPQ9NYB0 399 aa19.92■□□□□ 0.78
CACNA1A-258ENST00000638029 CCDC47Q96A33 483 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-258ENST00000638029 NEFHP12036 1026 aa19.91■□□□□ 0.78
CACNA1A-258ENST00000638029 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
CACNA1A-258ENST00000638029 CUX2O14529 1486 aa19.9■□□□□ 0.78
CACNA1A-258ENST00000638029 PSME1Q06323 249 aa19.9■□□□□ 0.78
CACNA1A-258ENST00000638029 ST18O60284 1047 aa19.9■□□□□ 0.78
CACNA1A-258ENST00000638029 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.78
CACNA1A-258ENST00000638029 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-258ENST00000638029 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
CACNA1A-258ENST00000638029 RALBP1Q15311 655 aa19.88■□□□□ 0.77
CACNA1A-258ENST00000638029 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-258ENST00000638029 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-258ENST00000638029 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-258ENST00000638029 PDILTQ8N807 584 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 LMOD3Q0VAK6 560 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 NOM1Q5C9Z4 860 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 CAGE1Q8TC20 777 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 CPLX1O14810 134 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 ANO2Q9NQ90 1003 aa19.86■□□□□ 0.77
CACNA1A-258ENST00000638029 ANKRD20A12PQ8NF67 263 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 TEFQ10587 303 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 TRDNQ13061 729 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 MATR3P43243 847 aaKnown RBP eCLIP19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 PIP4K2BP78356 416 aa19.85■□□□□ 0.77
CACNA1A-258ENST00000638029 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-258ENST00000638029 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
CACNA1A-258ENST00000638029 NUP155O75694 1391 aa19.84■□□□□ 0.77
CACNA1A-258ENST00000638029 NEXNQ0ZGT2 675 aa19.84■□□□□ 0.77
CACNA1A-258ENST00000638029 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
CACNA1A-258ENST00000638029 HSP90AB3PQ58FF7 597 aa19.83■□□□□ 0.77
CACNA1A-258ENST00000638029 ANKRD45Q5TZF3 282 aa19.83■□□□□ 0.77
CACNA1A-258ENST00000638029 OFD1O75665 1012 aa19.82■□□□□ 0.76
CACNA1A-258ENST00000638029 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
CACNA1A-258ENST00000638029 AIMP1Q12904 312 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-258ENST00000638029 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
CACNA1A-258ENST00000638029 CHMP4CQ96CF2 233 aa19.81■□□□□ 0.76
CACNA1A-258ENST00000638029 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-258ENST00000638029 IPO9Q96P70 1041 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-258ENST00000638029 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
CACNA1A-258ENST00000638029 H0YHG0 523 aa19.8■□□□□ 0.76
CACNA1A-258ENST00000638029 NUTM2GQ5VZR2 741 aa19.8■□□□□ 0.76
CACNA1A-258ENST00000638029 KIF3BO15066 747 aa19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 CPLX2Q6PUV4 134 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 PSMD1Q99460 953 aa19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 CCDC191Q8NCU4 936 aa19.79■□□□□ 0.76
CACNA1A-258ENST00000638029 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-258ENST00000638029 CA8P35219 290 aa19.78■□□□□ 0.76
CACNA1A-258ENST00000638029 TRAK1Q9UPV9 953 aa19.78■□□□□ 0.76
CACNA1A-258ENST00000638029 BRPF1P55201 1214 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-258ENST00000638029 MAPK8IP2Q13387 824 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-258ENST00000638029 LRRFIP1Q32MZ4 808 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-258ENST00000638029 NEUROD6Q96NK8 337 aa19.77■□□□□ 0.76
CACNA1A-258ENST00000638029 RDXP35241 583 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-258ENST00000638029 PKNOX2Q96KN3 472 aa19.77■□□□□ 0.76
CACNA1A-258ENST00000638029 MPHOSPH9Q99550 1183 aa19.77■□□□□ 0.76
CACNA1A-258ENST00000638029 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-258ENST00000638029 HOOK1Q9UJC3 728 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-258ENST00000638029 NEBLO76041 1014 aa19.76■□□□□ 0.75
CACNA1A-258ENST00000638029 MPHOSPH10O00566 681 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-258ENST00000638029 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
CACNA1A-258ENST00000638029 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 TTC16Q8NEE8 873 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 SYCP1Q15431 976 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 ZHX3Q9H4I2 956 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 ATF3P18847 181 aa19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 SEPT7Q16181 437 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-258ENST00000638029 GRM1Q13255 1194 aa19.74■□□□□ 0.75
CACNA1A-258ENST00000638029 IFIT2P09913 472 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-258ENST00000638029 STRN4Q9NRL3 753 aa19.73■□□□□ 0.75
CACNA1A-258ENST00000638029 IFT57Q9NWB7 429 aa19.73■□□□□ 0.75
CACNA1A-258ENST00000638029 CDR1P51861 262 aa19.72■□□□□ 0.75
CACNA1A-258ENST00000638029 HNRNPMP52272 730 aaKnown RBP eCLIP19.72■□□□□ 0.75
CACNA1A-258ENST00000638029 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-258ENST00000638029 CCDC173Q0VFZ6 552 aa19.71■□□□□ 0.75
CACNA1A-258ENST00000638029 CDK5RAP3Q96JB5 506 aa19.71■□□□□ 0.75
CACNA1A-258ENST00000638029 KRT18P05783 430 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-258ENST00000638029 ATP2B1P20020 1258 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms