RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
CACNA1A-243ENST00000637616 SLKQ9H2G2 1235 aaPredicted RBP26.14■■□□□ 1.77
CACNA1A-243ENST00000637616 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
CACNA1A-243ENST00000637616 PANK1Q8TE04 598 aa26.12■■□□□ 1.77
CACNA1A-243ENST00000637616 COG6Q9Y2V7 657 aa26.12■■□□□ 1.77
CACNA1A-243ENST00000637616 USP19O94966 1318 aa26.11■■□□□ 1.77
CACNA1A-243ENST00000637616 POGKQ9P215 609 aa26.11■■□□□ 1.77
CACNA1A-243ENST00000637616 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
CACNA1A-243ENST00000637616 TRMT2AQ8IZ69 625 aaKnown RBP26.1■■□□□ 1.77
CACNA1A-243ENST00000637616 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
CACNA1A-243ENST00000637616 CANXP27824 592 aaKnown RBP26.08■■□□□ 1.77
CACNA1A-243ENST00000637616 NEUROD2Q15784 382 aa26.08■■□□□ 1.76
CACNA1A-243ENST00000637616 MYO5CQ9NQX4 1742 aa26.07■■□□□ 1.76
CACNA1A-243ENST00000637616 ARXQ96QS3 562 aa26.07■■□□□ 1.76
CACNA1A-243ENST00000637616 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
CACNA1A-243ENST00000637616 NUP160Q12769 1436 aa26.05■■□□□ 1.76
CACNA1A-243ENST00000637616 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
CACNA1A-243ENST00000637616 EIF3AQ14152 1382 aaKnown RBP26.03■■□□□ 1.76
CACNA1A-243ENST00000637616 ARHGAP5Q13017 1502 aa26.02■■□□□ 1.76
CACNA1A-243ENST00000637616 LAMC1P11047 1609 aa26.02■■□□□ 1.76
CACNA1A-243ENST00000637616 E9PSI1 815 aa26.02■■□□□ 1.76
CACNA1A-243ENST00000637616 RRP7AQ9Y3A4 280 aaKnown RBP26.01■■□□□ 1.75
CACNA1A-243ENST00000637616 CLUAP1Q96AJ1 413 aa26.01■■□□□ 1.75
CACNA1A-243ENST00000637616 TNNQ9UQP3 1299 aa26.01■■□□□ 1.75
CACNA1A-243ENST00000637616 TNNT2P45379 298 aaPredicted RBP26■■□□□ 1.75
CACNA1A-243ENST00000637616 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
CACNA1A-243ENST00000637616 SPRYD3Q8NCJ5 442 aa26■■□□□ 1.75
CACNA1A-243ENST00000637616 CDCA8Q53HL2 280 aa25.99■■□□□ 1.75
CACNA1A-243ENST00000637616 BCL2L13Q9BXK5 485 aa25.99■■□□□ 1.75
CACNA1A-243ENST00000637616 ASXL1Q8IXJ9 1541 aa25.98■■□□□ 1.75
CACNA1A-243ENST00000637616 CENPJQ9HC77 1338 aaPredicted RBP25.98■■□□□ 1.75
CACNA1A-243ENST00000637616 UNC13BO14795 1591 aa25.97■■□□□ 1.75
CACNA1A-243ENST00000637616 CARD14Q9BXL6 1004 aa25.96■■□□□ 1.75
CACNA1A-243ENST00000637616 PIK3C2GO75747 1445 aa25.95■■□□□ 1.75
CACNA1A-243ENST00000637616 PREX2Q70Z35 1606 aa25.94■■□□□ 1.74
CACNA1A-243ENST00000637616 WWC1Q8IX03 1113 aa25.94■■□□□ 1.74
CACNA1A-243ENST00000637616 CGNL1Q0VF96 1302 aa25.94■■□□□ 1.74
CACNA1A-243ENST00000637616 BECN1Q14457 450 aa25.92■■□□□ 1.74
CACNA1A-243ENST00000637616 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
CACNA1A-243ENST00000637616 PCDHB15Q9Y5E8 787 aa25.92■■□□□ 1.74
CACNA1A-243ENST00000637616 PDE3AQ14432 1141 aa25.91■■□□□ 1.74
CACNA1A-243ENST00000637616 RLBP1P12271 317 aa25.91■■□□□ 1.74
CACNA1A-243ENST00000637616 TTC37Q6PGP7 1564 aa25.91■■□□□ 1.74
CACNA1A-243ENST00000637616 CFAP70Q5T0N1 1121 aa25.91■■□□□ 1.74
CACNA1A-243ENST00000637616 FAM43AQ8N2R8 423 aa25.9■■□□□ 1.74
CACNA1A-243ENST00000637616 SCAF11Q99590 1463 aaKnown RBP25.9■■□□□ 1.74
CACNA1A-243ENST00000637616 MAPK8IP3Q9UPT6 1336 aa25.89■■□□□ 1.74
CACNA1A-243ENST00000637616 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-243ENST00000637616 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
CACNA1A-243ENST00000637616 ATP10AO60312 1499 aa25.87■■□□□ 1.73
CACNA1A-243ENST00000637616 GZF1Q9H116 711 aaPredicted RBP25.86■■□□□ 1.73
CACNA1A-243ENST00000637616 SYNMO15061 1565 aa25.86■■□□□ 1.73
CACNA1A-243ENST00000637616 TBC1D2Q9BYX2 928 aa25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 ANTXR1Q9H6X2 564 aa25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 RRAGDQ9NQL2 400 aaPredicted RBP25.85■■□□□ 1.73
CACNA1A-243ENST00000637616 RARSP54136 660 aaKnown RBP25.84■■□□□ 1.73
CACNA1A-243ENST00000637616 ABCC2Q92887 1545 aa25.83■■□□□ 1.73
CACNA1A-243ENST00000637616 AFAP1Q8N556 730 aa25.83■■□□□ 1.73
CACNA1A-243ENST00000637616 MAST1Q9Y2H9 1570 aa25.83■■□□□ 1.72
CACNA1A-243ENST00000637616 DUOX2Q9NRD8 1548 aa25.82■■□□□ 1.72
CACNA1A-243ENST00000637616 IQGAP1P46940 1657 aa25.82■■□□□ 1.72
CACNA1A-243ENST00000637616 NLRP1Q9C000 1473 aa25.82■■□□□ 1.72
CACNA1A-243ENST00000637616 UPF2Q9HAU5 1272 aaKnown RBP25.82■■□□□ 1.72
CACNA1A-243ENST00000637616 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
CACNA1A-243ENST00000637616 NPC1L1Q9UHC9 1359 aa25.79■■□□□ 1.72
CACNA1A-243ENST00000637616 TBC1D32Q96NH3 1257 aa25.79■■□□□ 1.72
CACNA1A-243ENST00000637616 MYOM1P52179 1685 aa25.79■■□□□ 1.72
CACNA1A-243ENST00000637616 ADGRF5Q8IZF2 1346 aa25.78■■□□□ 1.72
CACNA1A-243ENST00000637616 TRAPPC8Q9Y2L5 1435 aa25.78■■□□□ 1.72
CACNA1A-243ENST00000637616 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
CACNA1A-243ENST00000637616 MORC1Q86VD1 984 aa25.77■■□□□ 1.72
CACNA1A-243ENST00000637616 RSPH6AQ9H0K4 717 aa25.77■■□□□ 1.72
CACNA1A-243ENST00000637616 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
CACNA1A-243ENST00000637616 PANK2Q9BZ23 570 aa25.74■■□□□ 1.71
CACNA1A-243ENST00000637616 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
CACNA1A-243ENST00000637616 SLC12A5Q9H2X9 1139 aa25.74■■□□□ 1.71
CACNA1A-243ENST00000637616 UBE2Q2Q8WVN8 375 aa25.73■■□□□ 1.71
CACNA1A-243ENST00000637616 ERVK-7P63135 1459 aa25.73■■□□□ 1.71
CACNA1A-243ENST00000637616 XRCC6P12956 609 aaKnown RBP eCLIP25.73■■□□□ 1.71
CACNA1A-243ENST00000637616 SCAPERQ9BY12 1400 aa25.73■■□□□ 1.71
CACNA1A-243ENST00000637616 SPAG9O60271 1321 aaKnown RBP25.73■■□□□ 1.71
CACNA1A-243ENST00000637616 MFAP1P55081 439 aaKnown RBP25.72■■□□□ 1.71
CACNA1A-243ENST00000637616 RUNDC1Q96C34 613 aa25.72■■□□□ 1.71
CACNA1A-243ENST00000637616 L1TD1Q5T7N2 865 aaKnown RBP25.71■■□□□ 1.71
CACNA1A-243ENST00000637616 VIRMAQ69YN4 1812 aaKnown RBP25.71■■□□□ 1.71
CACNA1A-243ENST00000637616 RWDD1Q9H446 243 aaPredicted RBP25.7■■□□□ 1.7
CACNA1A-243ENST00000637616 TRAK1Q9UPV9 953 aa25.69■■□□□ 1.7
CACNA1A-243ENST00000637616 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
CACNA1A-243ENST00000637616 MTHFSP49914 203 aa25.68■■□□□ 1.7
CACNA1A-243ENST00000637616 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
CACNA1A-243ENST00000637616 POLR3AO14802 1390 aaPredicted RBP25.68■■□□□ 1.7
CACNA1A-243ENST00000637616 KDM5AP29375 1690 aaKnown RBP25.68■■□□□ 1.7
CACNA1A-243ENST00000637616 KIF3BO15066 747 aa25.67■■□□□ 1.7
CACNA1A-243ENST00000637616 MCM4P33991 863 aa25.67■■□□□ 1.7
CACNA1A-243ENST00000637616 NGEFQ8N5V2 710 aa25.67■■□□□ 1.7
CACNA1A-243ENST00000637616 GOLGA6L3A6NEY3 463 aa25.67■■□□□ 1.7
CACNA1A-243ENST00000637616 CHGAP10645 457 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms