RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
SRP54-AS1-205ENST00000636540 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
SRP54-AS1-205ENST00000636540 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
SRP54-AS1-205ENST00000636540 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 TXNDC2Q86VQ3 553 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
SRP54-AS1-205ENST00000636540 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.26
SRP54-AS1-205ENST00000636540 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.25
SRP54-AS1-205ENST00000636540 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
SRP54-AS1-205ENST00000636540 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
SRP54-AS1-205ENST00000636540 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
SRP54-AS1-205ENST00000636540 PPLO60437 1756 aa16.61■□□□□ 0.25
SRP54-AS1-205ENST00000636540 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
SRP54-AS1-205ENST00000636540 IFT172Q9UG01 1749 aa16.6■□□□□ 0.25
SRP54-AS1-205ENST00000636540 CHD2O14647 1828 aaKnown RBP16.6■□□□□ 0.25
SRP54-AS1-205ENST00000636540 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
SRP54-AS1-205ENST00000636540 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
SRP54-AS1-205ENST00000636540 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
SRP54-AS1-205ENST00000636540 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.24
SRP54-AS1-205ENST00000636540 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
SRP54-AS1-205ENST00000636540 ALKQ9UM73 1620 aa16.57■□□□□ 0.24
SRP54-AS1-205ENST00000636540 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
SRP54-AS1-205ENST00000636540 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
SRP54-AS1-205ENST00000636540 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
SRP54-AS1-205ENST00000636540 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
SRP54-AS1-205ENST00000636540 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
SRP54-AS1-205ENST00000636540 XRN1Q8IZH2 1706 aaKnown RBP16.55■□□□□ 0.24
SRP54-AS1-205ENST00000636540 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
SRP54-AS1-205ENST00000636540 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
SRP54-AS1-205ENST00000636540 SLC26A8Q96RN1 970 aa16.52■□□□□ 0.24
SRP54-AS1-205ENST00000636540 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
SRP54-AS1-205ENST00000636540 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
SRP54-AS1-205ENST00000636540 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
SRP54-AS1-205ENST00000636540 HRCP23327 699 aa16.48■□□□□ 0.23
SRP54-AS1-205ENST00000636540 KCNA6P17658 529 aa16.47■□□□□ 0.23
SRP54-AS1-205ENST00000636540 PTPRUQ92729 1446 aa16.46■□□□□ 0.23
SRP54-AS1-205ENST00000636540 BCANQ96GW7 911 aa16.46■□□□□ 0.23
SRP54-AS1-205ENST00000636540 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
SRP54-AS1-205ENST00000636540 TMEM94Q12767 1356 aa16.45■□□□□ 0.22
SRP54-AS1-205ENST00000636540 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
SRP54-AS1-205ENST00000636540 ANKRD30BQ9BXX2 1392 aa16.44■□□□□ 0.22
SRP54-AS1-205ENST00000636540 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
SRP54-AS1-205ENST00000636540 MYOM2P54296 1465 aa16.43■□□□□ 0.22
SRP54-AS1-205ENST00000636540 LAMC1P11047 1609 aa16.43■□□□□ 0.22
SRP54-AS1-205ENST00000636540 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
SRP54-AS1-205ENST00000636540 NALCNQ8IZF0 1738 aa16.42■□□□□ 0.22
SRP54-AS1-205ENST00000636540 METP08581 1390 aa16.41■□□□□ 0.22
SRP54-AS1-205ENST00000636540 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
SRP54-AS1-205ENST00000636540 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
SRP54-AS1-205ENST00000636540 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
SRP54-AS1-205ENST00000636540 NRXN1Q9ULB1 1477 aa16.41■□□□□ 0.22
SRP54-AS1-205ENST00000636540 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
SRP54-AS1-205ENST00000636540 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
SRP54-AS1-205ENST00000636540 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
SRP54-AS1-205ENST00000636540 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
SRP54-AS1-205ENST00000636540 TOM1O60784 492 aa16.38■□□□□ 0.21
SRP54-AS1-205ENST00000636540 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
SRP54-AS1-205ENST00000636540 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
SRP54-AS1-205ENST00000636540 MSH6P52701 1360 aa16.36■□□□□ 0.21
SRP54-AS1-205ENST00000636540 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
SRP54-AS1-205ENST00000636540 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
SRP54-AS1-205ENST00000636540 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
SRP54-AS1-205ENST00000636540 AMOTL2Q9Y2J4 779 aa16.34■□□□□ 0.21
SRP54-AS1-205ENST00000636540 DCCP43146 1447 aa16.34■□□□□ 0.21
SRP54-AS1-205ENST00000636540 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
SRP54-AS1-205ENST00000636540 TECPR2O15040 1411 aa16.32■□□□□ 0.2
SRP54-AS1-205ENST00000636540 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
SRP54-AS1-205ENST00000636540 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
SRP54-AS1-205ENST00000636540 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
SRP54-AS1-205ENST00000636540 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
SRP54-AS1-205ENST00000636540 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
SRP54-AS1-205ENST00000636540 CDC42BPGQ6DT37 1551 aa16.28■□□□□ 0.2
SRP54-AS1-205ENST00000636540 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
SRP54-AS1-205ENST00000636540 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
SRP54-AS1-205ENST00000636540 PHLPP1O60346 1717 aa16.27■□□□□ 0.19
SRP54-AS1-205ENST00000636540 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
SRP54-AS1-205ENST00000636540 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
SRP54-AS1-205ENST00000636540 HSPA1LP34931 641 aa16.26■□□□□ 0.19
SRP54-AS1-205ENST00000636540 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
SRP54-AS1-205ENST00000636540 AHDC1Q5TGY3 1603 aaPredicted RBP16.26■□□□□ 0.19
SRP54-AS1-205ENST00000636540 NHSL1Q5SYE7 1610 aa16.25■□□□□ 0.19
SRP54-AS1-205ENST00000636540 MST1RQ04912 1400 aa16.25■□□□□ 0.19
SRP54-AS1-205ENST00000636540 YTHDC2Q9H6S0 1430 aaKnown RBP16.25■□□□□ 0.19
SRP54-AS1-205ENST00000636540 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
SRP54-AS1-205ENST00000636540 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
SRP54-AS1-205ENST00000636540 DLC1Q96QB1 1528 aa16.24■□□□□ 0.19
SRP54-AS1-205ENST00000636540 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
SRP54-AS1-205ENST00000636540 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
SRP54-AS1-205ENST00000636540 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
SRP54-AS1-205ENST00000636540 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
SRP54-AS1-205ENST00000636540 FMN2Q9NZ56 1722 aa16.22■□□□□ 0.19
SRP54-AS1-205ENST00000636540 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
SRP54-AS1-205ENST00000636540 ADGRB2O60241 1585 aa16.21■□□□□ 0.18
SRP54-AS1-205ENST00000636540 ATF3P18847 181 aa16.2■□□□□ 0.18
SRP54-AS1-205ENST00000636540 SLAIN2Q9P270 581 aa16.2■□□□□ 0.18
SRP54-AS1-205ENST00000636540 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
SRP54-AS1-205ENST00000636540 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms