RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 TOMM70O94826 608 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 HIST2H2BCQ6DN03 193 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 HIST2H2BDQ6DRA6 164 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 COL23A1Q86Y22 540 aaPredicted RBP1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 POTEDQ86YR6 584 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 NKX2-3Q8TAU0 364 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 SPON1Q9HCB6 807 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 STXBP5LQ9Y2K9 1186 aa1.17□□□□□ -2.22
SYNGAP1-213ENST00000636193 MED19A0JLT2 244 aaPredicted RBP1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 ID4P47928 161 aa1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 LSM14BQ9BX40 385 aaKnown RBP1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 MTMR10Q9NXD2 777 aa1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 PDZD2O15018 2839 aa1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 UTP20O75691 2785 aaKnown RBP1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 TENM1Q9UKZ4 2725 aa1.16□□□□□ -2.22
SYNGAP1-213ENST00000636193 RANBP2P49792 3224 aaKnown RBP1.15□□□□□ -2.22
SYNGAP1-213ENST00000636193 ATP10DQ9P241 1426 aa1.15□□□□□ -2.22
SYNGAP1-213ENST00000636193 COL24A1Q17RW2 1714 aa1.15□□□□□ -2.22
SYNGAP1-213ENST00000636193 DNAH12Q6ZR08 3092 aa1.15□□□□□ -2.22
SYNGAP1-213ENST00000636193 BHMG1C9JSJ3 638 aaPredicted RBP1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 ARHGAP6O43182 974 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 WIPF1O43516 503 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 NHLH1Q02575 133 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 LRFN3Q9BTN0 628 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 CD320Q9NPF0 282 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 ANKFY1Q9P2R3 1169 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 ZNF281Q9Y2X9 895 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 DHX57Q6P158 1386 aaKnown RBP1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 PTPRMP28827 1452 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 ADAMTS7Q9UKP4 1686 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 CAMTA1Q9Y6Y1 1673 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 MST1RQ04912 1400 aa1.15□□□□□ -2.23
SYNGAP1-213ENST00000636193 MTORP42345 2549 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 CDK12Q9NYV4 1490 aaPredicted RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 BAZ1BQ9UIG0 1483 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 COL17A1Q9UMD9 1497 aaPredicted RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 NOTCH3Q9UM47 2321 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 EYSQ5T1H1 3165 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 LARP1BQ659C4 914 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 EDAQ92838 391 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 FBXL18Q96ME1 805 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 MCOLN1Q9GZU1 580 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 MYT1LQ9UL68 1186 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 FBN1P35555 2871 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 RYR1P21817 5038 aa1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
SYNGAP1-213ENST00000636193 WDR90Q96KV7 1748 aa1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 KIF3CO14782 793 aa1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 SYNCRIPO60506 623 aaKnown RBP1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 C16orf71Q8IYS4 520 aaPredicted RBP1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 PHF12Q96QT6 1004 aa1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 RTEL1-TNFRSF6BF6WH68 1400 aa1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 SYNJ1O43426 1573 aa1.13□□□□□ -2.23
SYNGAP1-213ENST00000636193 HSPA8P11142 646 aaKnown RBP1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 HOXA10P31260 410 aaPredicted RBP1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 RBM6P78332 1123 aaKnown RBP1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 DGKZQ13574 1117 aa1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 TMEM31Q5JXX7 168 aa1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 DEFB123Q8N688 67 aa1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 CHMP7Q8WUX9 453 aaPredicted RBP1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 NGLY1Q96IV0 654 aa1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 TLN2Q9Y4G6 2542 aa1.12□□□□□ -2.23
SYNGAP1-213ENST00000636193 SPTA1P02549 2419 aa1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 EP300Q09472 2414 aaPredicted RBP1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 PTPRZ1P23471 2315 aaPredicted RBP1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 NEBP20929 6669 aa1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 EIF4E1BA6NMX2 242 aaKnown RBP1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 RGL2O15211 777 aa1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 CRELD1Q96HD1 420 aa1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 ZNF335Q9H4Z2 1342 aaPredicted RBP1.11□□□□□ -2.23
SYNGAP1-213ENST00000636193 KIF13AQ9H1H9 1805 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 SHANK3Q9BYB0 1731 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 FSTL1Q12841 308 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 TJAP1Q5JTD0 557 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 DGLUCYQ7Z3D6 616 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 ANKRD24Q8TF21 1146 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 QTRT2Q9H974 415 aaKnown RBP1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 CRCT1Q9UGL9 99 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 TELO2Q9Y4R8 837 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 BCL9LQ86UU0 1499 aa1.1□□□□□ -2.23
SYNGAP1-213ENST00000636193 UNC80Q8N2C7 3258 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 NSD1Q96L73 2696 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 SMARCA4P51532 1647 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 POU3F2P20265 443 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 BAG6P46379 1132 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 SRSF1Q07955 248 aaKnown RBP eCLIP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 DMWDQ09019 674 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 ASCL5Q7RTU5 278 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 NFATC2IPQ8NCF5 419 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 RBM46Q8TBY0 533 aaKnown RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 ZNF428Q96B54 188 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 ZFP91Q96JP5 570 aaPredicted RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 SYT17Q9BSW7 474 aa1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 MKRN1Q9UHC7 482 aaKnown RBP1.09□□□□□ -2.23
SYNGAP1-213ENST00000636193 SPTBN5Q9NRC6 3674 aaKnown RBP1.09□□□□□ -2.24
SYNGAP1-213ENST00000636193 RPRD2Q5VT52 1461 aaKnown RBP1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms