RNA–Protein interactions for RNA: ENST00000633494.1

SEMA4A-216, Transcript of semaphorin 4A, humanhuman

TSL 4

Gene SEMA4A, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-216ENST00000633494 TRIM52Q96A61 297 aa30.39■■■□□ 2.46
SEMA4A-216ENST00000633494 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.38■■■□□ 2.45
SEMA4A-216ENST00000633494 BCANQ96GW7 911 aa30.38■■■□□ 2.45
SEMA4A-216ENST00000633494 TOM1O60784 492 aa30.37■■■□□ 2.45
SEMA4A-216ENST00000633494 PLEKHG1Q9ULL1 1385 aa30.36■■■□□ 2.45
SEMA4A-216ENST00000633494 SLC26A8Q96RN1 970 aa30.35■■■□□ 2.45
SEMA4A-216ENST00000633494 TRPM2O94759 1503 aa30.31■■■□□ 2.44
SEMA4A-216ENST00000633494 KCNA6P17658 529 aa30.3■■■□□ 2.44
SEMA4A-216ENST00000633494 SCAF1Q9H7N4 1312 aaKnown RBP30.28■■■□□ 2.44
SEMA4A-216ENST00000633494 SLC4A1APQ9BWU0 796 aaKnown RBP30.28■■■□□ 2.44
SEMA4A-216ENST00000633494 CLTCL1P53675 1640 aa30.26■■■□□ 2.44
SEMA4A-216ENST00000633494 NWD1Q149M9 1564 aa30.25■■■□□ 2.43
SEMA4A-216ENST00000633494 PIP4K2BP78356 416 aa30.25■■■□□ 2.43
SEMA4A-216ENST00000633494 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
SEMA4A-216ENST00000633494 NKTRP30414 1462 aaKnown RBP30.24■■■□□ 2.43
SEMA4A-216ENST00000633494 NUTM2DQ5VT03 806 aaPredicted RBP30.23■■■□□ 2.43
SEMA4A-216ENST00000633494 KIF1BO60333 1816 aa30.23■■■□□ 2.43
SEMA4A-216ENST00000633494 XIRP1Q702N8 1843 aaKnown RBP30.23■■■□□ 2.43
SEMA4A-216ENST00000633494 DIP2AQ14689 1571 aa30.23■■■□□ 2.43
SEMA4A-216ENST00000633494 ZNF326Q5BKZ1 582 aaKnown RBP30.22■■■□□ 2.43
SEMA4A-216ENST00000633494 TBX22Q9Y458 520 aa30.22■■■□□ 2.43
SEMA4A-216ENST00000633494 ALKQ9UM73 1620 aa30.21■■■□□ 2.43
SEMA4A-216ENST00000633494 CHD2O14647 1828 aaKnown RBP30.2■■■□□ 2.43
SEMA4A-216ENST00000633494 PROSER2Q86WR7 435 aaPredicted RBP30.2■■■□□ 2.43
SEMA4A-216ENST00000633494 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.42
SEMA4A-216ENST00000633494 TMEM94Q12767 1356 aa30.18■■■□□ 2.42
SEMA4A-216ENST00000633494 ADAMTS13Q76LX8 1427 aa30.18■■■□□ 2.42
SEMA4A-216ENST00000633494 PIK3R4Q99570 1358 aa30.15■■■□□ 2.42
SEMA4A-216ENST00000633494 SETD5Q9C0A6 1442 aa30.14■■■□□ 2.42
SEMA4A-216ENST00000633494 NEXMIFQ5QGS0 1516 aa30.12■■■□□ 2.41
SEMA4A-216ENST00000633494 SETBP1Q9Y6X0 1596 aa30.11■■■□□ 2.41
SEMA4A-216ENST00000633494 HSPA1LP34931 641 aa30.1■■■□□ 2.41
SEMA4A-216ENST00000633494 MPHOSPH9Q99550 1183 aa30.1■■■□□ 2.41
SEMA4A-216ENST00000633494 NRXN3Q9Y4C0 1643 aa30.07■■■□□ 2.4
SEMA4A-216ENST00000633494 MSH6P52701 1360 aa30.06■■■□□ 2.4
SEMA4A-216ENST00000633494 FOXD1Q16676 465 aa30.06■■■□□ 2.4
SEMA4A-216ENST00000633494 RBM33Q96EV2 1170 aaKnown RBP30.06■■■□□ 2.4
SEMA4A-216ENST00000633494 RPGRIP1LQ68CZ1 1315 aa30.03■■■□□ 2.4
SEMA4A-216ENST00000633494 CCDC144AA2RUR9 1427 aa30.03■■■□□ 2.4
SEMA4A-216ENST00000633494 NCOA3Q9Y6Q9 1424 aa30.03■■■□□ 2.4
SEMA4A-216ENST00000633494 DISP3Q9P2K9 1392 aa30.03■■■□□ 2.4
SEMA4A-216ENST00000633494 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
SEMA4A-216ENST00000633494 VGFO15240 615 aaPredicted RBP30.01■■■□□ 2.39
SEMA4A-216ENST00000633494 AMOTL2Q9Y2J4 779 aa30■■■□□ 2.39
SEMA4A-216ENST00000633494 PTPRUQ92729 1446 aa29.99■■■□□ 2.39
SEMA4A-216ENST00000633494 PPLO60437 1756 aa29.98■■■□□ 2.39
SEMA4A-216ENST00000633494 FAM135BQ49AJ0 1406 aa29.97■■■□□ 2.39
SEMA4A-216ENST00000633494 XRN1Q8IZH2 1706 aaKnown RBP29.96■■■□□ 2.39
SEMA4A-216ENST00000633494 C14orf37Q86TY3 774 aa29.96■■■□□ 2.39
SEMA4A-216ENST00000633494 METP08581 1390 aa29.93■■■□□ 2.38
SEMA4A-216ENST00000633494 ROBO1Q9Y6N7 1651 aa29.91■■■□□ 2.38
SEMA4A-216ENST00000633494 SPATA31E1Q6ZUB1 1445 aa29.89■■■□□ 2.38
SEMA4A-216ENST00000633494 C19orf44Q9H6X5 657 aa29.89■■■□□ 2.38
SEMA4A-216ENST00000633494 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.88■■■□□ 2.37
SEMA4A-216ENST00000633494 SLAIN2Q9P270 581 aa29.88■■■□□ 2.37
SEMA4A-216ENST00000633494 RGL3Q3MIN7 710 aa29.87■■■□□ 2.37
SEMA4A-216ENST00000633494 SETD1AO15047 1707 aaKnown RBP29.87■■■□□ 2.37
SEMA4A-216ENST00000633494 HRCP23327 699 aa29.86■■■□□ 2.37
SEMA4A-216ENST00000633494 CADPS2Q86UW7 1296 aa29.86■■■□□ 2.37
SEMA4A-216ENST00000633494 ATF3P18847 181 aa29.85■■■□□ 2.37
SEMA4A-216ENST00000633494 ANKRD30BQ9BXX2 1392 aa29.85■■■□□ 2.37
SEMA4A-216ENST00000633494 IFT172Q9UG01 1749 aa29.85■■■□□ 2.37
SEMA4A-216ENST00000633494 MED1Q15648 1581 aaPredicted RBP29.84■■■□□ 2.37
SEMA4A-216ENST00000633494 DCCP43146 1447 aa29.82■■■□□ 2.36
SEMA4A-216ENST00000633494 ADGRF5Q8IZF2 1346 aa29.78■■■□□ 2.36
SEMA4A-216ENST00000633494 PTCH1Q13635 1447 aa29.78■■■□□ 2.36
SEMA4A-216ENST00000633494 ADGRL3Q9HAR2 1447 aa29.76■■■□□ 2.35
SEMA4A-216ENST00000633494 PHLPP1O60346 1717 aa29.75■■■□□ 2.35
SEMA4A-216ENST00000633494 PRAG1Q86YV5 1406 aa29.75■■■□□ 2.35
SEMA4A-216ENST00000633494 NALCNQ8IZF0 1738 aa29.72■■■□□ 2.35
SEMA4A-216ENST00000633494 PIK3C2GO75747 1445 aa29.71■■■□□ 2.35
SEMA4A-216ENST00000633494 ROBO2Q9HCK4 1378 aa29.7■■■□□ 2.35
SEMA4A-216ENST00000633494 ILDR2Q71H61 639 aa29.69■■■□□ 2.34
SEMA4A-216ENST00000633494 MYOM2P54296 1465 aa29.68■■■□□ 2.34
SEMA4A-216ENST00000633494 PHF23Q9BUL5 403 aaPredicted RBP29.67■■■□□ 2.34
SEMA4A-216ENST00000633494 MST1RQ04912 1400 aa29.67■■■□□ 2.34
SEMA4A-216ENST00000633494 AHDC1Q5TGY3 1603 aaPredicted RBP29.67■■■□□ 2.34
SEMA4A-216ENST00000633494 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
SEMA4A-216ENST00000633494 BRINP3Q76B58 766 aa29.64■■■□□ 2.34
SEMA4A-216ENST00000633494 LAMC1P11047 1609 aa29.63■■■□□ 2.33
SEMA4A-216ENST00000633494 LRPPRCP42704 1394 aaKnown RBP29.63■■■□□ 2.33
SEMA4A-216ENST00000633494 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
SEMA4A-216ENST00000633494 JCADQ9P266 1359 aa29.62■■■□□ 2.33
SEMA4A-216ENST00000633494 TECPR2O15040 1411 aa29.62■■■□□ 2.33
SEMA4A-216ENST00000633494 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
SEMA4A-216ENST00000633494 KNDC1Q76NI1 1749 aa29.61■■■□□ 2.33
SEMA4A-216ENST00000633494 STK26Q9P289 416 aa29.6■■■□□ 2.33
SEMA4A-216ENST00000633494 ABCC11Q96J66 1382 aa29.59■■■□□ 2.33
SEMA4A-216ENST00000633494 TMEM132EQ6IEE7 984 aa29.58■■■□□ 2.33
SEMA4A-216ENST00000633494 C14orf93Q9H972 538 aaKnown RBP29.58■■■□□ 2.33
SEMA4A-216ENST00000633494 YTHDC2Q9H6S0 1430 aaKnown RBP29.56■■■□□ 2.32
SEMA4A-216ENST00000633494 NHSL1Q5SYE7 1610 aa29.55■■■□□ 2.32
SEMA4A-216ENST00000633494 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
SEMA4A-216ENST00000633494 STAC3Q96MF2 364 aa29.54■■■□□ 2.32
SEMA4A-216ENST00000633494 DHX57Q6P158 1386 aaKnown RBP29.53■■■□□ 2.32
SEMA4A-216ENST00000633494 CDC42BPGQ6DT37 1551 aa29.53■■■□□ 2.32
SEMA4A-216ENST00000633494 CFAP70Q5T0N1 1121 aa29.53■■■□□ 2.32
SEMA4A-216ENST00000633494 SHPRHQ149N8 1683 aa29.51■■■□□ 2.31
SEMA4A-216ENST00000633494 DCAF11Q8TEB1 546 aa29.5■■■□□ 2.31
SEMA4A-216ENST00000633494 WAPLQ7Z5K2 1190 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms