RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 SLC26A8Q96RN1 970 aa20.71■□□□□ 0.91
TREX1-206ENST00000629913 NWD1Q149M9 1564 aa20.71■□□□□ 0.91
TREX1-206ENST00000629913 CHGAP10645 457 aaKnown RBP20.7■□□□□ 0.9
TREX1-206ENST00000629913 PIP4K2BP78356 416 aa20.7■□□□□ 0.9
TREX1-206ENST00000629913 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
TREX1-206ENST00000629913 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
TREX1-206ENST00000629913 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
TREX1-206ENST00000629913 KCNA6P17658 529 aa20.68■□□□□ 0.9
TREX1-206ENST00000629913 HDGFP51858 240 aaKnown RBP20.68■□□□□ 0.9
TREX1-206ENST00000629913 NKTRP30414 1462 aaKnown RBP20.68■□□□□ 0.9
TREX1-206ENST00000629913 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
TREX1-206ENST00000629913 BCANQ96GW7 911 aa20.66■□□□□ 0.9
TREX1-206ENST00000629913 TRPM2O94759 1503 aa20.66■□□□□ 0.9
TREX1-206ENST00000629913 TMEM94Q12767 1356 aa20.64■□□□□ 0.89
TREX1-206ENST00000629913 HSPA1LP34931 641 aa20.64■□□□□ 0.89
TREX1-206ENST00000629913 CLTCL1P53675 1640 aa20.64■□□□□ 0.89
TREX1-206ENST00000629913 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
TREX1-206ENST00000629913 ADAMTS13Q76LX8 1427 aa20.63■□□□□ 0.89
TREX1-206ENST00000629913 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
TREX1-206ENST00000629913 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
TREX1-206ENST00000629913 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
TREX1-206ENST00000629913 TBX22Q9Y458 520 aa20.61■□□□□ 0.89
TREX1-206ENST00000629913 CHD2O14647 1828 aaKnown RBP20.61■□□□□ 0.89
TREX1-206ENST00000629913 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
TREX1-206ENST00000629913 PROSER2Q86WR7 435 aaPredicted RBP20.59■□□□□ 0.89
TREX1-206ENST00000629913 PIK3R4Q99570 1358 aa20.57■□□□□ 0.88
TREX1-206ENST00000629913 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
TREX1-206ENST00000629913 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
TREX1-206ENST00000629913 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
TREX1-206ENST00000629913 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
TREX1-206ENST00000629913 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
TREX1-206ENST00000629913 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
TREX1-206ENST00000629913 KIF1BO60333 1816 aa20.54■□□□□ 0.88
TREX1-206ENST00000629913 MSH6P52701 1360 aa20.52■□□□□ 0.88
TREX1-206ENST00000629913 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.87
TREX1-206ENST00000629913 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
TREX1-206ENST00000629913 PTPRUQ92729 1446 aa20.5■□□□□ 0.87
TREX1-206ENST00000629913 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
TREX1-206ENST00000629913 XRN1Q8IZH2 1706 aaKnown RBP20.49■□□□□ 0.87
TREX1-206ENST00000629913 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
TREX1-206ENST00000629913 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
TREX1-206ENST00000629913 AMOTL2Q9Y2J4 779 aa20.46■□□□□ 0.87
TREX1-206ENST00000629913 FOXD1Q16676 465 aa20.45■□□□□ 0.86
TREX1-206ENST00000629913 METP08581 1390 aa20.45■□□□□ 0.86
TREX1-206ENST00000629913 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
TREX1-206ENST00000629913 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
TREX1-206ENST00000629913 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
TREX1-206ENST00000629913 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
TREX1-206ENST00000629913 CCDC144AA2RUR9 1427 aa20.42■□□□□ 0.86
TREX1-206ENST00000629913 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
TREX1-206ENST00000629913 PPLO60437 1756 aa20.41■□□□□ 0.86
TREX1-206ENST00000629913 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
TREX1-206ENST00000629913 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
TREX1-206ENST00000629913 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
TREX1-206ENST00000629913 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
TREX1-206ENST00000629913 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
TREX1-206ENST00000629913 DCCP43146 1447 aa20.38■□□□□ 0.85
TREX1-206ENST00000629913 SPATA31E1Q6ZUB1 1445 aa20.38■□□□□ 0.85
TREX1-206ENST00000629913 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
TREX1-206ENST00000629913 CADPS2Q86UW7 1296 aa20.37■□□□□ 0.85
TREX1-206ENST00000629913 ATF3P18847 181 aa20.35■□□□□ 0.85
TREX1-206ENST00000629913 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
TREX1-206ENST00000629913 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
TREX1-206ENST00000629913 PHLPP1O60346 1717 aa20.33■□□□□ 0.85
TREX1-206ENST00000629913 IFT172Q9UG01 1749 aa20.33■□□□□ 0.85
TREX1-206ENST00000629913 ADGRL3Q9HAR2 1447 aa20.33■□□□□ 0.84
TREX1-206ENST00000629913 COL16A1Q07092 1604 aaPredicted RBP20.31■□□□□ 0.84
TREX1-206ENST00000629913 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
TREX1-206ENST00000629913 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
TREX1-206ENST00000629913 AHDC1Q5TGY3 1603 aaPredicted RBP20.31■□□□□ 0.84
TREX1-206ENST00000629913 SOCS7O14512 581 aa20.3■□□□□ 0.84
TREX1-206ENST00000629913 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
TREX1-206ENST00000629913 ADGRF5Q8IZF2 1346 aa20.29■□□□□ 0.84
TREX1-206ENST00000629913 MST1RQ04912 1400 aa20.29■□□□□ 0.84
TREX1-206ENST00000629913 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
TREX1-206ENST00000629913 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
TREX1-206ENST00000629913 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.83
TREX1-206ENST00000629913 JCADQ9P266 1359 aa20.26■□□□□ 0.83
TREX1-206ENST00000629913 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
TREX1-206ENST00000629913 PIK3C2GO75747 1445 aa20.26■□□□□ 0.83
TREX1-206ENST00000629913 TECPR2O15040 1411 aa20.22■□□□□ 0.83
TREX1-206ENST00000629913 HRCP23327 699 aa20.22■□□□□ 0.83
TREX1-206ENST00000629913 MYOM2P54296 1465 aa20.22■□□□□ 0.83
TREX1-206ENST00000629913 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
TREX1-206ENST00000629913 NRXN1Q9ULB1 1477 aa20.21■□□□□ 0.83
TREX1-206ENST00000629913 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
TREX1-206ENST00000629913 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
TREX1-206ENST00000629913 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
TREX1-206ENST00000629913 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
TREX1-206ENST00000629913 C1orf167Q5SNV9 1468 aa20.18■□□□□ 0.82
TREX1-206ENST00000629913 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
TREX1-206ENST00000629913 LAMC1P11047 1609 aa20.16■□□□□ 0.82
TREX1-206ENST00000629913 SPATA31A6Q5VVP1 1343 aa20.16■□□□□ 0.82
TREX1-206ENST00000629913 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
TREX1-206ENST00000629913 LRP6O75581 1613 aa20.16■□□□□ 0.82
TREX1-206ENST00000629913 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
TREX1-206ENST00000629913 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
TREX1-206ENST00000629913 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
TREX1-206ENST00000629913 STK26Q9P289 416 aa20.14■□□□□ 0.81
TREX1-206ENST00000629913 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms