RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 TRPM2O94759 1503 aa16.37■□□□□ 0.21
CHD2-217ENST00000629136 KIF1BO60333 1816 aa16.37■□□□□ 0.21
CHD2-217ENST00000629136 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
CHD2-217ENST00000629136 UBAP1LF5GYI3 381 aa16.33■□□□□ 0.2
CHD2-217ENST00000629136 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
CHD2-217ENST00000629136 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
CHD2-217ENST00000629136 PLEKHG1Q9ULL1 1385 aa16.32■□□□□ 0.2
CHD2-217ENST00000629136 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
CHD2-217ENST00000629136 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
CHD2-217ENST00000629136 SLC26A8Q96RN1 970 aa16.28■□□□□ 0.2
CHD2-217ENST00000629136 ADAMTS13Q76LX8 1427 aa16.28■□□□□ 0.2
CHD2-217ENST00000629136 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
CHD2-217ENST00000629136 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
CHD2-217ENST00000629136 PPLO60437 1756 aa16.26■□□□□ 0.19
CHD2-217ENST00000629136 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
CHD2-217ENST00000629136 TOM1O60784 492 aa16.25■□□□□ 0.19
CHD2-217ENST00000629136 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
CHD2-217ENST00000629136 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
CHD2-217ENST00000629136 IFT172Q9UG01 1749 aa16.23■□□□□ 0.19
CHD2-217ENST00000629136 KCNA6P17658 529 aa16.23■□□□□ 0.19
CHD2-217ENST00000629136 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD2-217ENST00000629136 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
CHD2-217ENST00000629136 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
CHD2-217ENST00000629136 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
CHD2-217ENST00000629136 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
CHD2-217ENST00000629136 TMEM94Q12767 1356 aa16.22■□□□□ 0.19
CHD2-217ENST00000629136 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
CHD2-217ENST00000629136 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
CHD2-217ENST00000629136 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.18
CHD2-217ENST00000629136 BCANQ96GW7 911 aa16.2■□□□□ 0.18
CHD2-217ENST00000629136 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
CHD2-217ENST00000629136 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
CHD2-217ENST00000629136 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
CHD2-217ENST00000629136 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
CHD2-217ENST00000629136 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
CHD2-217ENST00000629136 HSPA1LP34931 641 aa16.17■□□□□ 0.18
CHD2-217ENST00000629136 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
CHD2-217ENST00000629136 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
CHD2-217ENST00000629136 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
CHD2-217ENST00000629136 MED1Q15648 1581 aaPredicted RBP16.16■□□□□ 0.18
CHD2-217ENST00000629136 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
CHD2-217ENST00000629136 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
CHD2-217ENST00000629136 FOXD1Q16676 465 aa16.14■□□□□ 0.17
CHD2-217ENST00000629136 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
CHD2-217ENST00000629136 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
CHD2-217ENST00000629136 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
CHD2-217ENST00000629136 MSH6P52701 1360 aa16.12■□□□□ 0.17
CHD2-217ENST00000629136 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 METP08581 1390 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
CHD2-217ENST00000629136 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
CHD2-217ENST00000629136 KNDC1Q76NI1 1749 aa16.06■□□□□ 0.16
CHD2-217ENST00000629136 COL16A1Q07092 1604 aaPredicted RBP16.06■□□□□ 0.16
CHD2-217ENST00000629136 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
CHD2-217ENST00000629136 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
CHD2-217ENST00000629136 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
CHD2-217ENST00000629136 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
CHD2-217ENST00000629136 DCCP43146 1447 aa16.04■□□□□ 0.16
CHD2-217ENST00000629136 PTCH1Q13635 1447 aa16.04■□□□□ 0.16
CHD2-217ENST00000629136 AHDC1Q5TGY3 1603 aaPredicted RBP16.04■□□□□ 0.16
CHD2-217ENST00000629136 VGFO15240 615 aaPredicted RBP16.03■□□□□ 0.16
CHD2-217ENST00000629136 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
CHD2-217ENST00000629136 LAMC1P11047 1609 aa16.02■□□□□ 0.16
CHD2-217ENST00000629136 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.15
CHD2-217ENST00000629136 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
CHD2-217ENST00000629136 SLAIN2Q9P270 581 aa16.01■□□□□ 0.15
CHD2-217ENST00000629136 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
CHD2-217ENST00000629136 SHPRHQ149N8 1683 aa16■□□□□ 0.15
CHD2-217ENST00000629136 MYOM2P54296 1465 aa16■□□□□ 0.15
CHD2-217ENST00000629136 C14orf37Q86TY3 774 aa16■□□□□ 0.15
CHD2-217ENST00000629136 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
CHD2-217ENST00000629136 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
CHD2-217ENST00000629136 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
CHD2-217ENST00000629136 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
CHD2-217ENST00000629136 MST1RQ04912 1400 aa15.99■□□□□ 0.15
CHD2-217ENST00000629136 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
CHD2-217ENST00000629136 CADPS2Q86UW7 1296 aa15.98■□□□□ 0.15
CHD2-217ENST00000629136 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
CHD2-217ENST00000629136 CDC42BPGQ6DT37 1551 aa15.96■□□□□ 0.15
CHD2-217ENST00000629136 TECPR2O15040 1411 aa15.95■□□□□ 0.14
CHD2-217ENST00000629136 ATF3P18847 181 aa15.95■□□□□ 0.14
CHD2-217ENST00000629136 HRCP23327 699 aa15.94■□□□□ 0.14
CHD2-217ENST00000629136 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
CHD2-217ENST00000629136 BRINP3Q76B58 766 aa15.92■□□□□ 0.14
CHD2-217ENST00000629136 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
CHD2-217ENST00000629136 JCADQ9P266 1359 aa15.9■□□□□ 0.14
CHD2-217ENST00000629136 C1orf167Q5SNV9 1468 aa15.9■□□□□ 0.14
CHD2-217ENST00000629136 ADGRB1O14514 1584 aa15.89■□□□□ 0.13
CHD2-217ENST00000629136 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
CHD2-217ENST00000629136 LRP6O75581 1613 aa15.89■□□□□ 0.13
CHD2-217ENST00000629136 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
CHD2-217ENST00000629136 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
CHD2-217ENST00000629136 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
CHD2-217ENST00000629136 ARHGEF28Q8N1W1 1705 aaKnown RBP15.86■□□□□ 0.13
CHD2-217ENST00000629136 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
CHD2-217ENST00000629136 PLEKHH1Q9ULM0 1364 aa15.86■□□□□ 0.13
CHD2-217ENST00000629136 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms