RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 FOXD1Q16676 465 aa30.76■■■□□ 2.51
CIRBP-246ENST00000628979 SLC26A8Q96RN1 970 aa30.74■■■□□ 2.51
CIRBP-246ENST00000628979 ZFYVE9O95405 1425 aa30.73■■■□□ 2.51
CIRBP-246ENST00000628979 ZNF326Q5BKZ1 582 aaKnown RBP30.73■■■□□ 2.51
CIRBP-246ENST00000628979 MPHOSPH9Q99550 1183 aa30.73■■■□□ 2.51
CIRBP-246ENST00000628979 TRPM2O94759 1503 aa30.73■■■□□ 2.51
CIRBP-246ENST00000628979 RAB3GAP2Q9H2M9 1393 aa30.72■■■□□ 2.51
CIRBP-246ENST00000628979 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.72■■■□□ 2.51
CIRBP-246ENST00000628979 CLTCL1P53675 1640 aa30.72■■■□□ 2.51
CIRBP-246ENST00000628979 CPS1P31327 1500 aa30.71■■■□□ 2.51
CIRBP-246ENST00000628979 IQSEC2Q5JU85 1478 aa30.69■■■□□ 2.5
CIRBP-246ENST00000628979 STRCP1A6NGW2 1772 aa30.68■■■□□ 2.5
CIRBP-246ENST00000628979 ACIN1Q9UKV3 1341 aaKnown RBP30.66■■■□□ 2.5
CIRBP-246ENST00000628979 KIF1BO60333 1816 aa30.66■■■□□ 2.5
CIRBP-246ENST00000628979 PLEKHG1Q9ULL1 1385 aa30.66■■■□□ 2.5
CIRBP-246ENST00000628979 UBAP1LF5GYI3 381 aa30.63■■■□□ 2.49
CIRBP-246ENST00000628979 LRRC7Q96NW7 1537 aa30.57■■■□□ 2.49
CIRBP-246ENST00000628979 KCNA6P17658 529 aa30.57■■■□□ 2.48
CIRBP-246ENST00000628979 TBX22Q9Y458 520 aa30.54■■■□□ 2.48
CIRBP-246ENST00000628979 CCDC144AA2RUR9 1427 aa30.54■■■□□ 2.48
CIRBP-246ENST00000628979 NEXMIFQ5QGS0 1516 aa30.51■■■□□ 2.47
CIRBP-246ENST00000628979 SCAF1Q9H7N4 1312 aaKnown RBP30.5■■■□□ 2.47
CIRBP-246ENST00000628979 ADAMTS13Q76LX8 1427 aa30.5■■■□□ 2.47
CIRBP-246ENST00000628979 PROSER2Q86WR7 435 aaPredicted RBP30.5■■■□□ 2.47
CIRBP-246ENST00000628979 TOM1O60784 492 aa30.49■■■□□ 2.47
CIRBP-246ENST00000628979 HRCP23327 699 aa30.48■■■□□ 2.47
CIRBP-246ENST00000628979 PIP4K2BP78356 416 aa30.48■■■□□ 2.47
CIRBP-246ENST00000628979 RGL3Q3MIN7 710 aa30.48■■■□□ 2.47
CIRBP-246ENST00000628979 RBM33Q96EV2 1170 aaKnown RBP30.48■■■□□ 2.47
CIRBP-246ENST00000628979 CHD2O14647 1828 aaKnown RBP30.46■■■□□ 2.47
CIRBP-246ENST00000628979 DIP2AQ14689 1571 aa30.45■■■□□ 2.46
CIRBP-246ENST00000628979 RPGRIP1LQ68CZ1 1315 aa30.45■■■□□ 2.46
CIRBP-246ENST00000628979 NWD1Q149M9 1564 aa30.44■■■□□ 2.46
CIRBP-246ENST00000628979 TMEM94Q12767 1356 aa30.43■■■□□ 2.46
CIRBP-246ENST00000628979 XIRP1Q702N8 1843 aaKnown RBP30.43■■■□□ 2.46
CIRBP-246ENST00000628979 VGFO15240 615 aaPredicted RBP30.43■■■□□ 2.46
CIRBP-246ENST00000628979 NRXN3Q9Y4C0 1643 aa30.42■■■□□ 2.46
CIRBP-246ENST00000628979 SETBP1Q9Y6X0 1596 aa30.41■■■□□ 2.46
CIRBP-246ENST00000628979 NKTRP30414 1462 aaKnown RBP30.39■■■□□ 2.46
CIRBP-246ENST00000628979 PPLO60437 1756 aa30.38■■■□□ 2.45
CIRBP-246ENST00000628979 AMOTL2Q9Y2J4 779 aa30.38■■■□□ 2.45
CIRBP-246ENST00000628979 PIK3R4Q99570 1358 aa30.37■■■□□ 2.45
CIRBP-246ENST00000628979 SPATA31E1Q6ZUB1 1445 aa30.37■■■□□ 2.45
CIRBP-246ENST00000628979 PTPRUQ92729 1446 aa30.35■■■□□ 2.45
CIRBP-246ENST00000628979 METP08581 1390 aa30.34■■■□□ 2.45
CIRBP-246ENST00000628979 ALKQ9UM73 1620 aa30.33■■■□□ 2.45
CIRBP-246ENST00000628979 ANKRD30BQ9BXX2 1392 aa30.32■■■□□ 2.44
CIRBP-246ENST00000628979 C14orf37Q86TY3 774 aa30.32■■■□□ 2.44
CIRBP-246ENST00000628979 ADGRF5Q8IZF2 1346 aa30.3■■■□□ 2.44
CIRBP-246ENST00000628979 MSH6P52701 1360 aa30.28■■■□□ 2.44
CIRBP-246ENST00000628979 IFT172Q9UG01 1749 aa30.26■■■□□ 2.43
CIRBP-246ENST00000628979 HSPA1LP34931 641 aa30.24■■■□□ 2.43
CIRBP-246ENST00000628979 XRN1Q8IZH2 1706 aaKnown RBP30.22■■■□□ 2.43
CIRBP-246ENST00000628979 SETD1AO15047 1707 aaKnown RBP30.22■■■□□ 2.43
CIRBP-246ENST00000628979 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
CIRBP-246ENST00000628979 NCOA3Q9Y6Q9 1424 aa30.19■■■□□ 2.42
CIRBP-246ENST00000628979 C19orf44Q9H6X5 657 aa30.16■■■□□ 2.42
CIRBP-246ENST00000628979 KDM2AQ9Y2K7 1162 aa30.16■■■□□ 2.42
CIRBP-246ENST00000628979 ATF3P18847 181 aa30.15■■■□□ 2.42
CIRBP-246ENST00000628979 SLAIN2Q9P270 581 aa30.14■■■□□ 2.42
CIRBP-246ENST00000628979 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.13■■■□□ 2.41
CIRBP-246ENST00000628979 STK26Q9P289 416 aa30.13■■■□□ 2.41
CIRBP-246ENST00000628979 PIK3C2GO75747 1445 aa30.13■■■□□ 2.41
CIRBP-246ENST00000628979 TMEM132EQ6IEE7 984 aa30.12■■■□□ 2.41
CIRBP-246ENST00000628979 DCAF11Q8TEB1 546 aa30.12■■■□□ 2.41
CIRBP-246ENST00000628979 CADPS2Q86UW7 1296 aa30.1■■■□□ 2.41
CIRBP-246ENST00000628979 MYOM2P54296 1465 aa30.1■■■□□ 2.41
CIRBP-246ENST00000628979 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
CIRBP-246ENST00000628979 ROBO2Q9HCK4 1378 aa30.09■■■□□ 2.41
CIRBP-246ENST00000628979 ROBO1Q9Y6N7 1651 aa30.08■■■□□ 2.41
CIRBP-246ENST00000628979 CFAP70Q5T0N1 1121 aa30.08■■■□□ 2.41
CIRBP-246ENST00000628979 C14orf93Q9H972 538 aaKnown RBP30.06■■■□□ 2.4
CIRBP-246ENST00000628979 NRXN1Q9ULB1 1477 aa30.06■■■□□ 2.4
CIRBP-246ENST00000628979 PTCH1Q13635 1447 aa30.05■■■□□ 2.4
CIRBP-246ENST00000628979 ASXL1Q8IXJ9 1541 aa30.02■■■□□ 2.4
CIRBP-246ENST00000628979 ADGRL3Q9HAR2 1447 aa30.02■■■□□ 2.4
CIRBP-246ENST00000628979 NALCNQ8IZF0 1738 aa30.02■■■□□ 2.4
CIRBP-246ENST00000628979 LRPPRCP42704 1394 aaKnown RBP30.02■■■□□ 2.4
CIRBP-246ENST00000628979 DHX57Q6P158 1386 aaKnown RBP30.02■■■□□ 2.4
CIRBP-246ENST00000628979 WAPLQ7Z5K2 1190 aa29.99■■■□□ 2.39
CIRBP-246ENST00000628979 DCCP43146 1447 aa29.98■■■□□ 2.39
CIRBP-246ENST00000628979 YTHDC2Q9H6S0 1430 aaKnown RBP29.98■■■□□ 2.39
CIRBP-246ENST00000628979 LAMC1P11047 1609 aa29.98■■■□□ 2.39
CIRBP-246ENST00000628979 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
CIRBP-246ENST00000628979 PRAG1Q86YV5 1406 aa29.97■■■□□ 2.39
CIRBP-246ENST00000628979 ABCC11Q96J66 1382 aa29.96■■■□□ 2.39
CIRBP-246ENST00000628979 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
CIRBP-246ENST00000628979 STAC3Q96MF2 364 aa29.96■■■□□ 2.39
CIRBP-246ENST00000628979 DISP3Q9P2K9 1392 aa29.95■■■□□ 2.39
CIRBP-246ENST00000628979 TECPR2O15040 1411 aa29.93■■■□□ 2.38
CIRBP-246ENST00000628979 MST1RQ04912 1400 aa29.93■■■□□ 2.38
CIRBP-246ENST00000628979 KNDC1Q76NI1 1749 aa29.93■■■□□ 2.38
CIRBP-246ENST00000628979 PHLPP1O60346 1717 aa29.92■■■□□ 2.38
CIRBP-246ENST00000628979 PLEKHH1Q9ULM0 1364 aa29.91■■■□□ 2.38
CIRBP-246ENST00000628979 BRINP3Q76B58 766 aa29.91■■■□□ 2.38
CIRBP-246ENST00000628979 SAFB2Q14151 953 aaKnown RBP eCLIP29.87■■■□□ 2.37
CIRBP-246ENST00000628979 TRAK1Q9UPV9 953 aa29.87■■■□□ 2.37
CIRBP-246ENST00000628979 SIRT1Q96EB6 747 aa29.85■■■□□ 2.37
CIRBP-246ENST00000628979 PRAM1Q96QH2 718 aa29.85■■■□□ 2.37
CIRBP-246ENST00000628979 L3MBTL2Q969R5 705 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms