RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 HSPA1LP34931 641 aa13.52□□□□□ -0.25
CPSF7-226ENST00000626926 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
CPSF7-226ENST00000626926 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
CPSF7-226ENST00000626926 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
CPSF7-226ENST00000626926 NUP155O75694 1391 aa13.49□□□□□ -0.25
CPSF7-226ENST00000626926 KCNA6P17658 529 aa13.49□□□□□ -0.25
CPSF7-226ENST00000626926 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
CPSF7-226ENST00000626926 TMEM94Q12767 1356 aa13.48□□□□□ -0.25
CPSF7-226ENST00000626926 NAIPQ13075 1403 aa13.47□□□□□ -0.25
CPSF7-226ENST00000626926 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
CPSF7-226ENST00000626926 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
CPSF7-226ENST00000626926 NRXN3Q9Y4C0 1643 aa13.47□□□□□ -0.25
CPSF7-226ENST00000626926 TRPM2O94759 1503 aa13.47□□□□□ -0.25
CPSF7-226ENST00000626926 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
CPSF7-226ENST00000626926 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
CPSF7-226ENST00000626926 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
CPSF7-226ENST00000626926 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.26
CPSF7-226ENST00000626926 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.26
CPSF7-226ENST00000626926 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
CPSF7-226ENST00000626926 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
CPSF7-226ENST00000626926 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
CPSF7-226ENST00000626926 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
CPSF7-226ENST00000626926 SOCS7O14512 581 aa13.44□□□□□ -0.26
CPSF7-226ENST00000626926 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPSF7-226ENST00000626926 TBX22Q9Y458 520 aa13.44□□□□□ -0.26
CPSF7-226ENST00000626926 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
CPSF7-226ENST00000626926 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
CPSF7-226ENST00000626926 KIF1BO60333 1816 aa13.41□□□□□ -0.26
CPSF7-226ENST00000626926 ITGAEP38570 1179 aa13.41□□□□□ -0.26
CPSF7-226ENST00000626926 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-226ENST00000626926 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
CPSF7-226ENST00000626926 MSH6P52701 1360 aa13.4□□□□□ -0.26
CPSF7-226ENST00000626926 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-226ENST00000626926 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-226ENST00000626926 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
CPSF7-226ENST00000626926 COL16A1Q07092 1604 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-226ENST00000626926 DCCP43146 1447 aa13.37□□□□□ -0.27
CPSF7-226ENST00000626926 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
CPSF7-226ENST00000626926 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
CPSF7-226ENST00000626926 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
CPSF7-226ENST00000626926 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-226ENST00000626926 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
CPSF7-226ENST00000626926 PPLO60437 1756 aa13.35□□□□□ -0.27
CPSF7-226ENST00000626926 BCANQ96GW7 911 aa13.34□□□□□ -0.27
CPSF7-226ENST00000626926 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
CPSF7-226ENST00000626926 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
CPSF7-226ENST00000626926 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
CPSF7-226ENST00000626926 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
CPSF7-226ENST00000626926 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-226ENST00000626926 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
CPSF7-226ENST00000626926 METP08581 1390 aa13.31□□□□□ -0.28
CPSF7-226ENST00000626926 IFT172Q9UG01 1749 aa13.3□□□□□ -0.28
CPSF7-226ENST00000626926 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
CPSF7-226ENST00000626926 NHSL1Q5SYE7 1610 aa13.3□□□□□ -0.28
CPSF7-226ENST00000626926 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
CPSF7-226ENST00000626926 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
CPSF7-226ENST00000626926 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
CPSF7-226ENST00000626926 LAMC1P11047 1609 aa13.28□□□□□ -0.28
CPSF7-226ENST00000626926 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-226ENST00000626926 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CPSF7-226ENST00000626926 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-226ENST00000626926 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-226ENST00000626926 RPGRIP1LQ68CZ1 1315 aa13.27□□□□□ -0.29
CPSF7-226ENST00000626926 MST1RQ04912 1400 aa13.27□□□□□ -0.29
CPSF7-226ENST00000626926 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
CPSF7-226ENST00000626926 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
CPSF7-226ENST00000626926 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
CPSF7-226ENST00000626926 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
CPSF7-226ENST00000626926 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
CPSF7-226ENST00000626926 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-226ENST00000626926 ATF3P18847 181 aa13.24□□□□□ -0.29
CPSF7-226ENST00000626926 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
CPSF7-226ENST00000626926 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
CPSF7-226ENST00000626926 LRP6O75581 1613 aa13.23□□□□□ -0.29
CPSF7-226ENST00000626926 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 BRINP3Q76B58 766 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 TECPR2O15040 1411 aa13.22□□□□□ -0.29
CPSF7-226ENST00000626926 CDC42BPGQ6DT37 1551 aa13.21□□□□□ -0.29
CPSF7-226ENST00000626926 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CPSF7-226ENST00000626926 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
CPSF7-226ENST00000626926 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
CPSF7-226ENST00000626926 NRXN1Q9ULB1 1477 aa13.18□□□□□ -0.3
CPSF7-226ENST00000626926 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
CPSF7-226ENST00000626926 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
CPSF7-226ENST00000626926 MYOM2P54296 1465 aa13.16□□□□□ -0.3
CPSF7-226ENST00000626926 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
CPSF7-226ENST00000626926 FOXD1Q16676 465 aa13.15□□□□□ -0.3
CPSF7-226ENST00000626926 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
CPSF7-226ENST00000626926 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-226ENST00000626926 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
CPSF7-226ENST00000626926 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
CPSF7-226ENST00000626926 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
CPSF7-226ENST00000626926 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
CPSF7-226ENST00000626926 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
CPSF7-226ENST00000626926 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-226ENST00000626926 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-226ENST00000626926 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms