RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
SOX2-OT-238ENST00000626299 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SOX2-OT-238ENST00000626299 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-238ENST00000626299 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
SOX2-OT-238ENST00000626299 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
SOX2-OT-238ENST00000626299 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-238ENST00000626299 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-238ENST00000626299 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
SOX2-OT-238ENST00000626299 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
SOX2-OT-238ENST00000626299 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
SOX2-OT-238ENST00000626299 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
SOX2-OT-238ENST00000626299 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
SOX2-OT-238ENST00000626299 ANKRD30BQ9BXX2 1392 aa20.02■□□□□ 0.8
SOX2-OT-238ENST00000626299 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
SOX2-OT-238ENST00000626299 KIF1BO60333 1816 aa20■□□□□ 0.79
SOX2-OT-238ENST00000626299 BCANQ96GW7 911 aa19.99■□□□□ 0.79
SOX2-OT-238ENST00000626299 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SOX2-OT-238ENST00000626299 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
SOX2-OT-238ENST00000626299 CPS1P31327 1500 aa19.97■□□□□ 0.79
SOX2-OT-238ENST00000626299 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
SOX2-OT-238ENST00000626299 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
SOX2-OT-238ENST00000626299 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
SOX2-OT-238ENST00000626299 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SOX2-OT-238ENST00000626299 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
SOX2-OT-238ENST00000626299 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
SOX2-OT-238ENST00000626299 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
SOX2-OT-238ENST00000626299 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
SOX2-OT-238ENST00000626299 KCNA6P17658 529 aa19.91■□□□□ 0.78
SOX2-OT-238ENST00000626299 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
SOX2-OT-238ENST00000626299 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
SOX2-OT-238ENST00000626299 PPLO60437 1756 aa19.9■□□□□ 0.78
SOX2-OT-238ENST00000626299 FBXO41Q8TF61 875 aa19.89■□□□□ 0.77
SOX2-OT-238ENST00000626299 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
SOX2-OT-238ENST00000626299 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
SOX2-OT-238ENST00000626299 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
SOX2-OT-238ENST00000626299 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
SOX2-OT-238ENST00000626299 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
SOX2-OT-238ENST00000626299 METP08581 1390 aa19.86■□□□□ 0.77
SOX2-OT-238ENST00000626299 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
SOX2-OT-238ENST00000626299 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
SOX2-OT-238ENST00000626299 MYOM2P54296 1465 aa19.83■□□□□ 0.76
SOX2-OT-238ENST00000626299 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
SOX2-OT-238ENST00000626299 TMEM94Q12767 1356 aa19.83■□□□□ 0.76
SOX2-OT-238ENST00000626299 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
SOX2-OT-238ENST00000626299 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SOX2-OT-238ENST00000626299 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
SOX2-OT-238ENST00000626299 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
SOX2-OT-238ENST00000626299 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
SOX2-OT-238ENST00000626299 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-238ENST00000626299 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
SOX2-OT-238ENST00000626299 SETD1AO15047 1707 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-238ENST00000626299 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
SOX2-OT-238ENST00000626299 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
SOX2-OT-238ENST00000626299 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
SOX2-OT-238ENST00000626299 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
SOX2-OT-238ENST00000626299 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
SOX2-OT-238ENST00000626299 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
SOX2-OT-238ENST00000626299 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
SOX2-OT-238ENST00000626299 C14orf93Q9H972 538 aaKnown RBP19.73■□□□□ 0.75
SOX2-OT-238ENST00000626299 PRAG1Q86YV5 1406 aa19.73■□□□□ 0.75
SOX2-OT-238ENST00000626299 TOM1O60784 492 aa19.72■□□□□ 0.75
SOX2-OT-238ENST00000626299 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
SOX2-OT-238ENST00000626299 NCOA3Q9Y6Q9 1424 aa19.72■□□□□ 0.75
SOX2-OT-238ENST00000626299 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
SOX2-OT-238ENST00000626299 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
SOX2-OT-238ENST00000626299 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
SOX2-OT-238ENST00000626299 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
SOX2-OT-238ENST00000626299 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
SOX2-OT-238ENST00000626299 MSH6P52701 1360 aa19.7■□□□□ 0.74
SOX2-OT-238ENST00000626299 LRPPRCP42704 1394 aaKnown RBP19.69■□□□□ 0.74
SOX2-OT-238ENST00000626299 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
SOX2-OT-238ENST00000626299 LAMC1P11047 1609 aa19.68■□□□□ 0.74
SOX2-OT-238ENST00000626299 TECPR2O15040 1411 aa19.68■□□□□ 0.74
SOX2-OT-238ENST00000626299 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
SOX2-OT-238ENST00000626299 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
SOX2-OT-238ENST00000626299 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
SOX2-OT-238ENST00000626299 STK26Q9P289 416 aa19.66■□□□□ 0.74
SOX2-OT-238ENST00000626299 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
SOX2-OT-238ENST00000626299 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
SOX2-OT-238ENST00000626299 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
SOX2-OT-238ENST00000626299 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
SOX2-OT-238ENST00000626299 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
SOX2-OT-238ENST00000626299 DCCP43146 1447 aa19.61■□□□□ 0.73
SOX2-OT-238ENST00000626299 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
SOX2-OT-238ENST00000626299 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.61■□□□□ 0.73
SOX2-OT-238ENST00000626299 PLEKHH1Q9ULM0 1364 aa19.6■□□□□ 0.73
SOX2-OT-238ENST00000626299 NALCNQ8IZF0 1738 aa19.6■□□□□ 0.73
SOX2-OT-238ENST00000626299 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
SOX2-OT-238ENST00000626299 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
SOX2-OT-238ENST00000626299 ATF3P18847 181 aa19.59■□□□□ 0.73
SOX2-OT-238ENST00000626299 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
SOX2-OT-238ENST00000626299 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
SOX2-OT-238ENST00000626299 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
SOX2-OT-238ENST00000626299 SIRT1Q96EB6 747 aa19.56■□□□□ 0.72
SOX2-OT-238ENST00000626299 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
SOX2-OT-238ENST00000626299 HSPA1LP34931 641 aa19.55■□□□□ 0.72
SOX2-OT-238ENST00000626299 MST1RQ04912 1400 aa19.55■□□□□ 0.72
SOX2-OT-238ENST00000626299 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
SOX2-OT-238ENST00000626299 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
SOX2-OT-238ENST00000626299 PRAM1Q96QH2 718 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms