RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.49■■■□□ 2.95
SF1-220ENST00000626028 PLEKHG1Q9ULL1 1385 aa33.47■■■□□ 2.95
SF1-220ENST00000626028 CLTCL1P53675 1640 aa33.44■■■□□ 2.94
SF1-220ENST00000626028 CHGAP10645 457 aaKnown RBP33.43■■■□□ 2.94
SF1-220ENST00000626028 SLC4A1APQ9BWU0 796 aaKnown RBP33.43■■■□□ 2.94
SF1-220ENST00000626028 PPP1R15AO75807 674 aaPredicted RBP33.41■■■□□ 2.94
SF1-220ENST00000626028 LRRC7Q96NW7 1537 aa33.41■■■□□ 2.94
SF1-220ENST00000626028 DIP2AQ14689 1571 aa33.38■■■□□ 2.93
SF1-220ENST00000626028 SETD5Q9C0A6 1442 aa33.38■■■□□ 2.93
SF1-220ENST00000626028 CHD2O14647 1828 aaKnown RBP33.37■■■□□ 2.93
SF1-220ENST00000626028 UBAP1LF5GYI3 381 aa33.37■■■□□ 2.93
SF1-220ENST00000626028 NWD1Q149M9 1564 aa33.36■■■□□ 2.93
SF1-220ENST00000626028 XIRP1Q702N8 1843 aaKnown RBP33.36■■■□□ 2.93
SF1-220ENST00000626028 KCNA6P17658 529 aa33.34■■■□□ 2.93
SF1-220ENST00000626028 SLC26A8Q96RN1 970 aa33.34■■■□□ 2.93
SF1-220ENST00000626028 TOM1O60784 492 aa33.33■■■□□ 2.93
SF1-220ENST00000626028 BCANQ96GW7 911 aa33.32■■■□□ 2.92
SF1-220ENST00000626028 TBX22Q9Y458 520 aa33.32■■■□□ 2.92
SF1-220ENST00000626028 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
SF1-220ENST00000626028 PIK3R4Q99570 1358 aa33.28■■■□□ 2.92
SF1-220ENST00000626028 MPHOSPH9Q99550 1183 aa33.27■■■□□ 2.92
SF1-220ENST00000626028 NEXMIFQ5QGS0 1516 aa33.27■■■□□ 2.92
SF1-220ENST00000626028 SETBP1Q9Y6X0 1596 aa33.26■■■□□ 2.92
SF1-220ENST00000626028 ADAMTS13Q76LX8 1427 aa33.26■■■□□ 2.91
SF1-220ENST00000626028 ZNF326Q5BKZ1 582 aaKnown RBP33.25■■■□□ 2.91
SF1-220ENST00000626028 RAB3GAP2Q9H2M9 1393 aa33.21■■■□□ 2.91
SF1-220ENST00000626028 ALKQ9UM73 1620 aa33.21■■■□□ 2.91
SF1-220ENST00000626028 NRXN3Q9Y4C0 1643 aa33.21■■■□□ 2.91
SF1-220ENST00000626028 HRCP23327 699 aa33.2■■■□□ 2.91
SF1-220ENST00000626028 RPGRIP1LQ68CZ1 1315 aa33.2■■■□□ 2.91
SF1-220ENST00000626028 PPLO60437 1756 aa33.19■■■□□ 2.9
SF1-220ENST00000626028 CCDC144AA2RUR9 1427 aa33.19■■■□□ 2.9
SF1-220ENST00000626028 NUTM2DQ5VT03 806 aaPredicted RBP33.18■■■□□ 2.9
SF1-220ENST00000626028 TMEM94Q12767 1356 aa33.16■■■□□ 2.9
SF1-220ENST00000626028 PROSER2Q86WR7 435 aaPredicted RBP33.15■■■□□ 2.9
SF1-220ENST00000626028 NCOA3Q9Y6Q9 1424 aa33.14■■■□□ 2.9
SF1-220ENST00000626028 VGFO15240 615 aaPredicted RBP33.13■■■□□ 2.89
SF1-220ENST00000626028 FOXD1Q16676 465 aa33.13■■■□□ 2.89
SF1-220ENST00000626028 PIP4K2BP78356 416 aa33.09■■■□□ 2.89
SF1-220ENST00000626028 XRN1Q8IZH2 1706 aaKnown RBP33.08■■■□□ 2.89
SF1-220ENST00000626028 IFT172Q9UG01 1749 aa33.08■■■□□ 2.89
SF1-220ENST00000626028 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
SF1-220ENST00000626028 SCAF1Q9H7N4 1312 aaKnown RBP33.06■■■□□ 2.88
SF1-220ENST00000626028 SPATA31E1Q6ZUB1 1445 aa33.06■■■□□ 2.88
SF1-220ENST00000626028 SETD1AO15047 1707 aaKnown RBP33.04■■■□□ 2.88
SF1-220ENST00000626028 MSH6P52701 1360 aa33.04■■■□□ 2.88
SF1-220ENST00000626028 PTPRUQ92729 1446 aa33.01■■■□□ 2.87
SF1-220ENST00000626028 ANKRD30BQ9BXX2 1392 aa33■■■□□ 2.87
SF1-220ENST00000626028 AMOTL2Q9Y2J4 779 aa33■■■□□ 2.87
SF1-220ENST00000626028 FAM135BQ49AJ0 1406 aa32.98■■■□□ 2.87
SF1-220ENST00000626028 METP08581 1390 aa32.97■■■□□ 2.87
SF1-220ENST00000626028 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.87
SF1-220ENST00000626028 HSPA1LP34931 641 aa32.95■■■□□ 2.87
SF1-220ENST00000626028 RBM33Q96EV2 1170 aaKnown RBP32.93■■■□□ 2.86
SF1-220ENST00000626028 PRAG1Q86YV5 1406 aa32.93■■■□□ 2.86
SF1-220ENST00000626028 C19orf44Q9H6X5 657 aa32.92■■■□□ 2.86
SF1-220ENST00000626028 ROBO1Q9Y6N7 1651 aa32.91■■■□□ 2.86
SF1-220ENST00000626028 DCCP43146 1447 aa32.9■■■□□ 2.86
SF1-220ENST00000626028 RGL3Q3MIN7 710 aa32.89■■■□□ 2.86
SF1-220ENST00000626028 C14orf37Q86TY3 774 aa32.87■■■□□ 2.85
SF1-220ENST00000626028 CADPS2Q86UW7 1296 aa32.87■■■□□ 2.85
SF1-220ENST00000626028 PTCH1Q13635 1447 aa32.86■■■□□ 2.85
SF1-220ENST00000626028 SLAIN2Q9P270 581 aa32.86■■■□□ 2.85
SF1-220ENST00000626028 MYOM2P54296 1465 aa32.84■■■□□ 2.85
SF1-220ENST00000626028 LAMC1P11047 1609 aa32.83■■■□□ 2.85
SF1-220ENST00000626028 PIK3C2GO75747 1445 aa32.83■■■□□ 2.85
SF1-220ENST00000626028 ADGRF5Q8IZF2 1346 aa32.82■■■□□ 2.84
SF1-220ENST00000626028 ATF3P18847 181 aa32.82■■■□□ 2.84
SF1-220ENST00000626028 NRXN1Q9ULB1 1477 aa32.8■■■□□ 2.84
SF1-220ENST00000626028 NALCNQ8IZF0 1738 aa32.79■■■□□ 2.84
SF1-220ENST00000626028 ADGRL3Q9HAR2 1447 aa32.78■■■□□ 2.84
SF1-220ENST00000626028 STAC3Q96MF2 364 aa32.77■■■□□ 2.84
SF1-220ENST00000626028 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
SF1-220ENST00000626028 DISP3Q9P2K9 1392 aa32.73■■■□□ 2.83
SF1-220ENST00000626028 TECPR2O15040 1411 aa32.73■■■□□ 2.83
SF1-220ENST00000626028 PHLPP1O60346 1717 aa32.73■■■□□ 2.83
SF1-220ENST00000626028 ROBO2Q9HCK4 1378 aa32.7■■■□□ 2.83
SF1-220ENST00000626028 MED1Q15648 1581 aaPredicted RBP32.69■■■□□ 2.82
SF1-220ENST00000626028 LRPPRCP42704 1394 aaKnown RBP32.69■■■□□ 2.82
SF1-220ENST00000626028 C14orf93Q9H972 538 aaKnown RBP32.68■■■□□ 2.82
SF1-220ENST00000626028 ABCC11Q96J66 1382 aa32.68■■■□□ 2.82
SF1-220ENST00000626028 ASXL1Q8IXJ9 1541 aa32.67■■■□□ 2.82
SF1-220ENST00000626028 AHDC1Q5TGY3 1603 aaPredicted RBP32.66■■■□□ 2.82
SF1-220ENST00000626028 MST1RQ04912 1400 aa32.66■■■□□ 2.82
SF1-220ENST00000626028 COL16A1Q07092 1604 aaPredicted RBP32.62■■■□□ 2.81
SF1-220ENST00000626028 YTHDC2Q9H6S0 1430 aaKnown RBP32.61■■■□□ 2.81
SF1-220ENST00000626028 SIRT1Q96EB6 747 aa32.6■■■□□ 2.81
SF1-220ENST00000626028 CDC42BPGQ6DT37 1551 aa32.6■■■□□ 2.81
SF1-220ENST00000626028 DHX57Q6P158 1386 aaKnown RBP32.59■■■□□ 2.81
SF1-220ENST00000626028 NHSL1Q5SYE7 1610 aa32.59■■■□□ 2.81
SF1-220ENST00000626028 BRINP3Q76B58 766 aa32.57■■■□□ 2.8
SF1-220ENST00000626028 DCAF11Q8TEB1 546 aa32.57■■■□□ 2.8
SF1-220ENST00000626028 TMEM132EQ6IEE7 984 aa32.56■■■□□ 2.8
SF1-220ENST00000626028 CFAP70Q5T0N1 1121 aa32.55■■■□□ 2.8
SF1-220ENST00000626028 STK26Q9P289 416 aa32.53■■■□□ 2.8
SF1-220ENST00000626028 JCADQ9P266 1359 aa32.53■■■□□ 2.8
SF1-220ENST00000626028 C1orf167Q5SNV9 1468 aa32.53■■■□□ 2.8
SF1-220ENST00000626028 DLC1Q96QB1 1528 aa32.52■■■□□ 2.8
SF1-220ENST00000626028 ADGRB1O14514 1584 aa32.52■■■□□ 2.8
SF1-220ENST00000626028 SHPRHQ149N8 1683 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms