RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, human

Gene LINC01006, Length 651 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-208	ENST00000624071	FBXO41	Q8TF61	875 aa		28.29	■■■□□ 2.12
LINC01006-208	ENST00000624071	ZFYVE9	O95405	1425 aa		28.27	■■■□□ 2.12
LINC01006-208	ENST00000624071	HDGF	P51858	240 aa	Known RBP	28.26	■■■□□ 2.11
LINC01006-208	ENST00000624071	SLC26A8	Q96RN1	970 aa		28.26	■■■□□ 2.11
LINC01006-208	ENST00000624071	TRPM2	O94759	1503 aa		28.26	■■■□□ 2.11
LINC01006-208	ENST00000624071	ZNF326	Q5BKZ1	582 aa	Known RBP	28.25	■■■□□ 2.11
LINC01006-208	ENST00000624071	ACIN1	Q9UKV3	1341 aa	Known RBP	28.23	■■■□□ 2.11
LINC01006-208	ENST00000624071	CLTCL1	P53675	1640 aa		28.23	■■■□□ 2.11
LINC01006-208	ENST00000624071	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.23	■■■□□ 2.11
LINC01006-208	ENST00000624071	MYO5B	Q9ULV0	1848 aa		28.22	■■■□□ 2.11
LINC01006-208	ENST00000624071	PLEKHG1	Q9ULL1	1385 aa		28.19	■■■□□ 2.1
LINC01006-208	ENST00000624071	CPS1	P31327	1500 aa		28.15	■■■□□ 2.1
LINC01006-208	ENST00000624071	HRC	P23327	699 aa		28.13	■■■□□ 2.09
LINC01006-208	ENST00000624071	CCDC144A	A2RUR9	1427 aa		28.12	■■■□□ 2.09
LINC01006-208	ENST00000624071	IQSEC2	Q5JU85	1478 aa		28.1	■■■□□ 2.09
LINC01006-208	ENST00000624071	UBAP1L	F5GYI3	381 aa		28.08	■■■□□ 2.09
LINC01006-208	ENST00000624071	KCNA6	P17658	529 aa		28.08	■■■□□ 2.09
LINC01006-208	ENST00000624071	STRCP1	A6NGW2	1772 aa		28.07	■■■□□ 2.08
LINC01006-208	ENST00000624071	RGL3	Q3MIN7	710 aa		28.07	■■■□□ 2.08
LINC01006-208	ENST00000624071	TBX22	Q9Y458	520 aa		28.07	■■■□□ 2.08
LINC01006-208	ENST00000624071	ADAMTS13	Q76LX8	1427 aa		28.07	■■■□□ 2.08
LINC01006-208	ENST00000624071	LRRC7	Q96NW7	1537 aa		28.06	■■■□□ 2.08
LINC01006-208	ENST00000624071	KIF1B	O60333	1816 aa		28.04	■■■□□ 2.08
LINC01006-208	ENST00000624071	NEXMIF	Q5QGS0	1516 aa		28.04	■■■□□ 2.08
LINC01006-208	ENST00000624071	RBM33	Q96EV2	1170 aa	Known RBP	28.03	■■■□□ 2.08
LINC01006-208	ENST00000624071	RPGRIP1L	Q68CZ1	1315 aa		28.01	■■■□□ 2.07
LINC01006-208	ENST00000624071	PROSER2	Q86WR7	435 aa	Predicted RBP	28.01	■■■□□ 2.07
LINC01006-208	ENST00000624071	VGF	O15240	615 aa	Predicted RBP	28	■■■□□ 2.07
LINC01006-208	ENST00000624071	SPATA31E1	Q6ZUB1	1445 aa		27.99	■■■□□ 2.07
LINC01006-208	ENST00000624071	ANKRD30B	Q9BXX2	1392 aa		27.98	■■■□□ 2.07
LINC01006-208	ENST00000624071	TMEM94	Q12767	1356 aa		27.97	■■■□□ 2.07
LINC01006-208	ENST00000624071	TOM1	O60784	492 aa		27.95	■■■□□ 2.06
LINC01006-208	ENST00000624071	TRIM26	Q12899	539 aa	Predicted RBP	27.95	■■■□□ 2.06
LINC01006-208	ENST00000624071	SCAF1	Q9H7N4	1312 aa	Known RBP	27.94	■■■□□ 2.06
LINC01006-208	ENST00000624071	PIP4K2B	P78356	416 aa		27.94	■■■□□ 2.06
LINC01006-208	ENST00000624071	DIP2A	Q14689	1571 aa		27.94	■■■□□ 2.06
LINC01006-208	ENST00000624071	SETBP1	Q9Y6X0	1596 aa		27.94	■■■□□ 2.06
LINC01006-208	ENST00000624071	AMOTL2	Q9Y2J4	779 aa		27.93	■■■□□ 2.06
LINC01006-208	ENST00000624071	NWD1	Q149M9	1564 aa		27.93	■■■□□ 2.06
LINC01006-208	ENST00000624071	NRXN3	Q9Y4C0	1643 aa		27.92	■■■□□ 2.06
LINC01006-208	ENST00000624071	MET	P08581	1390 aa		27.92	■■■□□ 2.06
LINC01006-208	ENST00000624071	PIK3R4	Q99570	1358 aa		27.92	■■■□□ 2.06
LINC01006-208	ENST00000624071	PTPRU	Q92729	1446 aa		27.92	■■■□□ 2.06
LINC01006-208	ENST00000624071	ADGRF5	Q8IZF2	1346 aa		27.92	■■■□□ 2.06
LINC01006-208	ENST00000624071	NKTR	P30414	1462 aa	Known RBP	27.91	■■■□□ 2.06
LINC01006-208	ENST00000624071	CHD2	O14647	1828 aa	Known RBP	27.85	■■■□□ 2.05
LINC01006-208	ENST00000624071	PPL	O60437	1756 aa		27.85	■■■□□ 2.05
LINC01006-208	ENST00000624071	C14orf37	Q86TY3	774 aa		27.84	■■■□□ 2.05
LINC01006-208	ENST00000624071	ALK	Q9UM73	1620 aa		27.82	■■■□□ 2.04
LINC01006-208	ENST00000624071	XIRP1	Q702N8	1843 aa	Known RBP	27.81	■■■□□ 2.04
LINC01006-208	ENST00000624071	MSH6	P52701	1360 aa		27.79	■■■□□ 2.04
LINC01006-208	ENST00000624071	KDM2A	Q9Y2K7	1162 aa		27.77	■■■□□ 2.04
LINC01006-208	ENST00000624071	DCAF11	Q8TEB1	546 aa		27.75	■■■□□ 2.03
LINC01006-208	ENST00000624071	IFT172	Q9UG01	1749 aa		27.75	■■■□□ 2.03
LINC01006-208	ENST00000624071	HSPA1L	P34931	641 aa		27.74	■■■□□ 2.03
LINC01006-208	ENST00000624071	TMEM132E	Q6IEE7	984 aa		27.74	■■■□□ 2.03
LINC01006-208	ENST00000624071	XRN1	Q8IZH2	1706 aa	Known RBP	27.74	■■■□□ 2.03
LINC01006-208	ENST00000624071	PIK3C2G	O75747	1445 aa		27.74	■■■□□ 2.03
LINC01006-208	ENST00000624071	STK26	Q9P289	416 aa		27.73	■■■□□ 2.03
LINC01006-208	ENST00000624071	NCOA3	Q9Y6Q9	1424 aa		27.72	■■■□□ 2.03
LINC01006-208	ENST00000624071	MYOM2	P54296	1465 aa		27.71	■■■□□ 2.03
LINC01006-208	ENST00000624071	SETD1A	O15047	1707 aa	Known RBP	27.71	■■■□□ 2.03
LINC01006-208	ENST00000624071	CFAP70	Q5T0N1	1121 aa		27.71	■■■□□ 2.03
LINC01006-208	ENST00000624071	C19orf44	Q9H6X5	657 aa		27.71	■■■□□ 2.03
LINC01006-208	ENST00000624071	ROBO2	Q9HCK4	1378 aa		27.7	■■■□□ 2.02
LINC01006-208	ENST00000624071	C14orf93	Q9H972	538 aa	Known RBP	27.69	■■■□□ 2.02
LINC01006-208	ENST00000624071	DHX57	Q6P158	1386 aa	Known RBP	27.69	■■■□□ 2.02
LINC01006-208	ENST00000624071	ATF3	P18847	181 aa		27.68	■■■□□ 2.02
LINC01006-208	ENST00000624071	SIN3A	Q96ST3	1273 aa		27.68	■■■□□ 2.02
LINC01006-208	ENST00000624071	SLAIN2	Q9P270	581 aa		27.68	■■■□□ 2.02
LINC01006-208	ENST00000624071	NRXN1	Q9ULB1	1477 aa		27.68	■■■□□ 2.02
LINC01006-208	ENST00000624071	ASXL1	Q8IXJ9	1541 aa		27.64	■■■□□ 2.02
LINC01006-208	ENST00000624071	NEUROD1	Q13562	356 aa		27.64	■■■□□ 2.02
LINC01006-208	ENST00000624071	CADPS2	Q86UW7	1296 aa		27.64	■■■□□ 2.02
LINC01006-208	ENST00000624071	PTCH1	Q13635	1447 aa		27.64	■■■□□ 2.02
LINC01006-208	ENST00000624071	LRPPRC	P42704	1394 aa	Known RBP	27.63	■■■□□ 2.01
LINC01006-208	ENST00000624071	FAM135B	Q49AJ0	1406 aa		27.62	■■■□□ 2.01
LINC01006-208	ENST00000624071	WAPL	Q7Z5K2	1190 aa		27.6	■■■□□ 2.01
LINC01006-208	ENST00000624071	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.59	■■■□□ 2.01
LINC01006-208	ENST00000624071	ADGRL3	Q9HAR2	1447 aa		27.59	■■■□□ 2.01
LINC01006-208	ENST00000624071	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.59	■■■□□ 2.01
LINC01006-208	ENST00000624071	STAC3	Q96MF2	364 aa		27.59	■■■□□ 2.01
LINC01006-208	ENST00000624071	ABCC11	Q96J66	1382 aa		27.59	■■■□□ 2.01
LINC01006-208	ENST00000624071	PRAG1	Q86YV5	1406 aa		27.58	■■■□□ 2.01
LINC01006-208	ENST00000624071	PCGF6	Q9BYE7	350 aa		27.58	■■■□□ 2.01
LINC01006-208	ENST00000624071	PLEKHH1	Q9ULM0	1364 aa		27.55	■■■□□ 2
LINC01006-208	ENST00000624071	TECPR2	O15040	1411 aa		27.54	■■■□□ 2
LINC01006-208	ENST00000624071	DCC	P43146	1447 aa		27.54	■■■□□ 2
LINC01006-208	ENST00000624071	L3MBTL2	Q969R5	705 aa		27.54	■■■□□ 2
LINC01006-208	ENST00000624071	ROBO1	Q9Y6N7	1651 aa		27.52	■■■□□ 2
LINC01006-208	ENST00000624071	NALCN	Q8IZF0	1738 aa		27.51	■■□□□ 1.99
LINC01006-208	ENST00000624071	LAMC1	P11047	1609 aa		27.51	■■□□□ 1.99
LINC01006-208	ENST00000624071	MST1R	Q04912	1400 aa		27.5	■■□□□ 1.99
LINC01006-208	ENST00000624071	TRAK1	Q9UPV9	953 aa		27.5	■■□□□ 1.99
LINC01006-208	ENST00000624071	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.49	■■□□□ 1.99
LINC01006-208	ENST00000624071	BRINP3	Q76B58	766 aa		27.49	■■□□□ 1.99
LINC01006-208	ENST00000624071	PRAM1	Q96QH2	718 aa		27.48	■■□□□ 1.99
LINC01006-208	ENST00000624071	ADGRB1	O14514	1584 aa		27.48	■■□□□ 1.99
LINC01006-208	ENST00000624071	SIRT1	Q96EB6	747 aa		27.47	■■□□□ 1.99
LINC01006-208	ENST00000624071	POGK	Q9P215	609 aa		27.46	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms