RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
LINC00963-213ENST00000622120 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
LINC00963-213ENST00000622120 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
LINC00963-213ENST00000622120 ZFYVE9O95405 1425 aa18.76■□□□□ 0.59
LINC00963-213ENST00000622120 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC00963-213ENST00000622120 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
LINC00963-213ENST00000622120 PLEKHG1Q9ULL1 1385 aa18.74■□□□□ 0.59
LINC00963-213ENST00000622120 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
LINC00963-213ENST00000622120 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
LINC00963-213ENST00000622120 KCNA6P17658 529 aa18.72■□□□□ 0.59
LINC00963-213ENST00000622120 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
LINC00963-213ENST00000622120 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
LINC00963-213ENST00000622120 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
LINC00963-213ENST00000622120 TRPM2O94759 1503 aa18.69■□□□□ 0.58
LINC00963-213ENST00000622120 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
LINC00963-213ENST00000622120 KIF1BO60333 1816 aa18.67■□□□□ 0.58
LINC00963-213ENST00000622120 PROSER2Q86WR7 435 aaPredicted RBP18.67■□□□□ 0.58
LINC00963-213ENST00000622120 NWD1Q149M9 1564 aa18.67■□□□□ 0.58
LINC00963-213ENST00000622120 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
LINC00963-213ENST00000622120 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
LINC00963-213ENST00000622120 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
LINC00963-213ENST00000622120 ALKQ9UM73 1620 aa18.66■□□□□ 0.58
LINC00963-213ENST00000622120 NKTRP30414 1462 aaKnown RBP18.65■□□□□ 0.58
LINC00963-213ENST00000622120 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
LINC00963-213ENST00000622120 DIP2AQ14689 1571 aa18.64■□□□□ 0.58
LINC00963-213ENST00000622120 HSPA1LP34931 641 aa18.63■□□□□ 0.57
LINC00963-213ENST00000622120 ADAMTS13Q76LX8 1427 aa18.62■□□□□ 0.57
LINC00963-213ENST00000622120 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
LINC00963-213ENST00000622120 PIK3R4Q99570 1358 aa18.59■□□□□ 0.57
LINC00963-213ENST00000622120 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
LINC00963-213ENST00000622120 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
LINC00963-213ENST00000622120 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.57
LINC00963-213ENST00000622120 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.56
LINC00963-213ENST00000622120 MSH6P52701 1360 aa18.57■□□□□ 0.56
LINC00963-213ENST00000622120 SETBP1Q9Y6X0 1596 aa18.56■□□□□ 0.56
LINC00963-213ENST00000622120 FOXD1Q16676 465 aa18.56■□□□□ 0.56
LINC00963-213ENST00000622120 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
LINC00963-213ENST00000622120 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
LINC00963-213ENST00000622120 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
LINC00963-213ENST00000622120 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
LINC00963-213ENST00000622120 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
LINC00963-213ENST00000622120 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
LINC00963-213ENST00000622120 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
LINC00963-213ENST00000622120 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
LINC00963-213ENST00000622120 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
LINC00963-213ENST00000622120 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
LINC00963-213ENST00000622120 PPLO60437 1756 aa18.5■□□□□ 0.55
LINC00963-213ENST00000622120 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
LINC00963-213ENST00000622120 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
LINC00963-213ENST00000622120 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
LINC00963-213ENST00000622120 METP08581 1390 aa18.48■□□□□ 0.55
LINC00963-213ENST00000622120 SLAIN2Q9P270 581 aa18.48■□□□□ 0.55
LINC00963-213ENST00000622120 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
LINC00963-213ENST00000622120 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
LINC00963-213ENST00000622120 ATF3P18847 181 aa18.46■□□□□ 0.55
LINC00963-213ENST00000622120 MED1Q15648 1581 aaPredicted RBP18.46■□□□□ 0.55
LINC00963-213ENST00000622120 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
LINC00963-213ENST00000622120 CADPS2Q86UW7 1296 aa18.45■□□□□ 0.54
LINC00963-213ENST00000622120 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
LINC00963-213ENST00000622120 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
LINC00963-213ENST00000622120 ILDR2Q71H61 639 aa18.41■□□□□ 0.54
LINC00963-213ENST00000622120 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
LINC00963-213ENST00000622120 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
LINC00963-213ENST00000622120 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
LINC00963-213ENST00000622120 DCCP43146 1447 aa18.4■□□□□ 0.54
LINC00963-213ENST00000622120 HRCP23327 699 aa18.38■□□□□ 0.53
LINC00963-213ENST00000622120 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
LINC00963-213ENST00000622120 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
LINC00963-213ENST00000622120 PTCH1Q13635 1447 aa18.37■□□□□ 0.53
LINC00963-213ENST00000622120 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
LINC00963-213ENST00000622120 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
LINC00963-213ENST00000622120 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.53
LINC00963-213ENST00000622120 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
LINC00963-213ENST00000622120 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
LINC00963-213ENST00000622120 MST1RQ04912 1400 aa18.32■□□□□ 0.52
LINC00963-213ENST00000622120 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
LINC00963-213ENST00000622120 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
LINC00963-213ENST00000622120 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
LINC00963-213ENST00000622120 JCADQ9P266 1359 aa18.3■□□□□ 0.52
LINC00963-213ENST00000622120 STK26Q9P289 416 aa18.3■□□□□ 0.52
LINC00963-213ENST00000622120 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
LINC00963-213ENST00000622120 MYOM2P54296 1465 aa18.28■□□□□ 0.52
LINC00963-213ENST00000622120 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
LINC00963-213ENST00000622120 SOCS7O14512 581 aa18.27■□□□□ 0.52
LINC00963-213ENST00000622120 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
LINC00963-213ENST00000622120 LAMC1P11047 1609 aa18.27■□□□□ 0.51
LINC00963-213ENST00000622120 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
LINC00963-213ENST00000622120 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
LINC00963-213ENST00000622120 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
LINC00963-213ENST00000622120 TECPR2O15040 1411 aa18.25■□□□□ 0.51
LINC00963-213ENST00000622120 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
LINC00963-213ENST00000622120 C1orf167Q5SNV9 1468 aa18.25■□□□□ 0.51
LINC00963-213ENST00000622120 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
LINC00963-213ENST00000622120 NHSL1Q5SYE7 1610 aa18.24■□□□□ 0.51
LINC00963-213ENST00000622120 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
LINC00963-213ENST00000622120 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
LINC00963-213ENST00000622120 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
LINC00963-213ENST00000622120 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
LINC00963-213ENST00000622120 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
LINC00963-213ENST00000622120 SPATA31A6Q5VVP1 1343 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms