RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
COL8A1-208ENST00000621757 RIMS2Q9UQ26 1411 aa17.94■□□□□ 0.46
COL8A1-208ENST00000621757 KIF1BO60333 1816 aa17.93■□□□□ 0.46
COL8A1-208ENST00000621757 FOXD1Q16676 465 aa17.91■□□□□ 0.46
COL8A1-208ENST00000621757 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
COL8A1-208ENST00000621757 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
COL8A1-208ENST00000621757 UBAP1LF5GYI3 381 aa17.9■□□□□ 0.46
COL8A1-208ENST00000621757 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
COL8A1-208ENST00000621757 CPS1P31327 1500 aa17.88■□□□□ 0.45
COL8A1-208ENST00000621757 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
COL8A1-208ENST00000621757 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
COL8A1-208ENST00000621757 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
COL8A1-208ENST00000621757 SOCS7O14512 581 aa17.86■□□□□ 0.45
COL8A1-208ENST00000621757 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
COL8A1-208ENST00000621757 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
COL8A1-208ENST00000621757 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL8A1-208ENST00000621757 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
COL8A1-208ENST00000621757 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
COL8A1-208ENST00000621757 ZNF326Q5BKZ1 582 aaKnown RBP17.83■□□□□ 0.44
COL8A1-208ENST00000621757 DIP2AQ14689 1571 aa17.83■□□□□ 0.44
COL8A1-208ENST00000621757 HRCP23327 699 aa17.82■□□□□ 0.44
COL8A1-208ENST00000621757 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
COL8A1-208ENST00000621757 NRXN3Q9Y4C0 1643 aa17.82■□□□□ 0.44
COL8A1-208ENST00000621757 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
COL8A1-208ENST00000621757 BCANQ96GW7 911 aa17.81■□□□□ 0.44
COL8A1-208ENST00000621757 PPLO60437 1756 aa17.81■□□□□ 0.44
COL8A1-208ENST00000621757 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
COL8A1-208ENST00000621757 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
COL8A1-208ENST00000621757 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
COL8A1-208ENST00000621757 SPATA31E1Q6ZUB1 1445 aa17.78■□□□□ 0.44
COL8A1-208ENST00000621757 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
COL8A1-208ENST00000621757 IFT172Q9UG01 1749 aa17.77■□□□□ 0.44
COL8A1-208ENST00000621757 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
COL8A1-208ENST00000621757 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
COL8A1-208ENST00000621757 HSPA1LP34931 641 aa17.76■□□□□ 0.43
COL8A1-208ENST00000621757 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
COL8A1-208ENST00000621757 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
COL8A1-208ENST00000621757 ANKRD30BQ9BXX2 1392 aa17.74■□□□□ 0.43
COL8A1-208ENST00000621757 KCNA6P17658 529 aa17.73■□□□□ 0.43
COL8A1-208ENST00000621757 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
COL8A1-208ENST00000621757 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
COL8A1-208ENST00000621757 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
COL8A1-208ENST00000621757 TOM1O60784 492 aa17.72■□□□□ 0.43
COL8A1-208ENST00000621757 PIK3R4Q99570 1358 aa17.71■□□□□ 0.43
COL8A1-208ENST00000621757 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
COL8A1-208ENST00000621757 ALKQ9UM73 1620 aa17.7■□□□□ 0.42
COL8A1-208ENST00000621757 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
COL8A1-208ENST00000621757 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
COL8A1-208ENST00000621757 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
COL8A1-208ENST00000621757 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
COL8A1-208ENST00000621757 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
COL8A1-208ENST00000621757 METP08581 1390 aa17.67■□□□□ 0.42
COL8A1-208ENST00000621757 MYOM2P54296 1465 aa17.65■□□□□ 0.42
COL8A1-208ENST00000621757 PROSER2Q86WR7 435 aaPredicted RBP17.65■□□□□ 0.42
COL8A1-208ENST00000621757 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
COL8A1-208ENST00000621757 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
COL8A1-208ENST00000621757 MED1Q15648 1581 aaPredicted RBP17.65■□□□□ 0.42
COL8A1-208ENST00000621757 PIK3C2GO75747 1445 aa17.64■□□□□ 0.42
COL8A1-208ENST00000621757 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
COL8A1-208ENST00000621757 AMOTL2Q9Y2J4 779 aa17.62■□□□□ 0.41
COL8A1-208ENST00000621757 ASXL1Q8IXJ9 1541 aa17.61■□□□□ 0.41
COL8A1-208ENST00000621757 LAMC1P11047 1609 aa17.6■□□□□ 0.41
COL8A1-208ENST00000621757 MSH6P52701 1360 aa17.59■□□□□ 0.41
COL8A1-208ENST00000621757 PTCH1Q13635 1447 aa17.58■□□□□ 0.41
COL8A1-208ENST00000621757 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
COL8A1-208ENST00000621757 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.41
COL8A1-208ENST00000621757 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.4
COL8A1-208ENST00000621757 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
COL8A1-208ENST00000621757 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
COL8A1-208ENST00000621757 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
COL8A1-208ENST00000621757 ROBO2Q9HCK4 1378 aa17.54■□□□□ 0.4
COL8A1-208ENST00000621757 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
COL8A1-208ENST00000621757 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
COL8A1-208ENST00000621757 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
COL8A1-208ENST00000621757 TECPR2O15040 1411 aa17.52■□□□□ 0.4
COL8A1-208ENST00000621757 ADGRL3Q9HAR2 1447 aa17.52■□□□□ 0.4
COL8A1-208ENST00000621757 DCCP43146 1447 aa17.51■□□□□ 0.39
COL8A1-208ENST00000621757 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
COL8A1-208ENST00000621757 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
COL8A1-208ENST00000621757 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
COL8A1-208ENST00000621757 ADGRB1O14514 1584 aa17.5■□□□□ 0.39
COL8A1-208ENST00000621757 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
COL8A1-208ENST00000621757 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
COL8A1-208ENST00000621757 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
COL8A1-208ENST00000621757 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
COL8A1-208ENST00000621757 C19orf44Q9H6X5 657 aa17.49■□□□□ 0.39
COL8A1-208ENST00000621757 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
COL8A1-208ENST00000621757 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
COL8A1-208ENST00000621757 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
COL8A1-208ENST00000621757 STK26Q9P289 416 aa17.47■□□□□ 0.39
COL8A1-208ENST00000621757 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
COL8A1-208ENST00000621757 ATF3P18847 181 aa17.46■□□□□ 0.39
COL8A1-208ENST00000621757 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
COL8A1-208ENST00000621757 SLAIN2Q9P270 581 aa17.45■□□□□ 0.38
COL8A1-208ENST00000621757 MST1RQ04912 1400 aa17.45■□□□□ 0.38
COL8A1-208ENST00000621757 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
COL8A1-208ENST00000621757 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
COL8A1-208ENST00000621757 PLEKHH1Q9ULM0 1364 aa17.44■□□□□ 0.38
COL8A1-208ENST00000621757 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
COL8A1-208ENST00000621757 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms