RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 PPP1R15AO75807 674 aaPredicted RBP36.01■■■■□ 3.36
THSD4-207ENST00000620694 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.01■■■■□ 3.36
THSD4-207ENST00000620694 MYO5BQ9ULV0 1848 aa36■■■■□ 3.35
THSD4-207ENST00000620694 ZNF326Q5BKZ1 582 aaKnown RBP35.98■■■■□ 3.35
THSD4-207ENST00000620694 LTBP4Q8N2S1 1624 aa35.97■■■■□ 3.35
THSD4-207ENST00000620694 BCANQ96GW7 911 aa35.97■■■■□ 3.35
THSD4-207ENST00000620694 NUTM2DQ5VT03 806 aaPredicted RBP35.94■■■■□ 3.34
THSD4-207ENST00000620694 CCDC144AA2RUR9 1427 aa35.93■■■■□ 3.34
THSD4-207ENST00000620694 PLEKHG1Q9ULL1 1385 aa35.92■■■■□ 3.34
THSD4-207ENST00000620694 TRIM26Q12899 539 aaPredicted RBP35.91■■■■□ 3.34
THSD4-207ENST00000620694 SENP3Q9H4L4 574 aaPredicted RBP35.9■■■■□ 3.34
THSD4-207ENST00000620694 SLC26A8Q96RN1 970 aa35.89■■■■□ 3.34
THSD4-207ENST00000620694 KIF1BO60333 1816 aa35.87■■■■□ 3.33
THSD4-207ENST00000620694 CPS1P31327 1500 aa35.83■■■■□ 3.33
THSD4-207ENST00000620694 FBXO41Q8TF61 875 aa35.8■■■■□ 3.32
THSD4-207ENST00000620694 RPGRIP1LQ68CZ1 1315 aa35.79■■■■□ 3.32
THSD4-207ENST00000620694 NEXMIFQ5QGS0 1516 aa35.78■■■■□ 3.32
THSD4-207ENST00000620694 IQSEC2Q5JU85 1478 aa35.77■■■■□ 3.32
THSD4-207ENST00000620694 TBX22Q9Y458 520 aa35.76■■■■□ 3.32
THSD4-207ENST00000620694 ANKRD30BQ9BXX2 1392 aa35.76■■■■□ 3.31
THSD4-207ENST00000620694 RGL3Q3MIN7 710 aa35.75■■■■□ 3.31
THSD4-207ENST00000620694 ILDR1Q86SU0 546 aaPredicted RBP35.74■■■■□ 3.31
THSD4-207ENST00000620694 SPATA31E1Q6ZUB1 1445 aa35.74■■■■□ 3.31
THSD4-207ENST00000620694 VGFO15240 615 aaPredicted RBP35.73■■■■□ 3.31
THSD4-207ENST00000620694 KCNA6P17658 529 aa35.73■■■■□ 3.31
THSD4-207ENST00000620694 ADAMTS13Q76LX8 1427 aa35.73■■■■□ 3.31
THSD4-207ENST00000620694 DIP2AQ14689 1571 aa35.68■■■■□ 3.3
THSD4-207ENST00000620694 STRCP1A6NGW2 1772 aa35.68■■■■□ 3.3
THSD4-207ENST00000620694 SETBP1Q9Y6X0 1596 aa35.66■■■■□ 3.3
THSD4-207ENST00000620694 LRRC7Q96NW7 1537 aa35.66■■■■□ 3.3
THSD4-207ENST00000620694 PIK3R4Q99570 1358 aa35.63■■■■□ 3.29
THSD4-207ENST00000620694 NRXN3Q9Y4C0 1643 aa35.61■■■■□ 3.29
THSD4-207ENST00000620694 NWD1Q149M9 1564 aa35.59■■■■□ 3.29
THSD4-207ENST00000620694 PPLO60437 1756 aa35.59■■■■□ 3.29
THSD4-207ENST00000620694 PROSER2Q86WR7 435 aaPredicted RBP35.58■■■■□ 3.29
THSD4-207ENST00000620694 NKTRP30414 1462 aaKnown RBP35.58■■■■□ 3.29
THSD4-207ENST00000620694 UBAP1LF5GYI3 381 aa35.57■■■■□ 3.28
THSD4-207ENST00000620694 ADGRF5Q8IZF2 1346 aa35.56■■■■□ 3.28
THSD4-207ENST00000620694 TMEM94Q12767 1356 aa35.53■■■■□ 3.28
THSD4-207ENST00000620694 METP08581 1390 aa35.52■■■■□ 3.28
THSD4-207ENST00000620694 AMOTL2Q9Y2J4 779 aa35.52■■■■□ 3.28
THSD4-207ENST00000620694 CHD2O14647 1828 aaKnown RBP35.52■■■■□ 3.28
THSD4-207ENST00000620694 PTPRUQ92729 1446 aa35.5■■■■□ 3.27
THSD4-207ENST00000620694 TOM1O60784 492 aa35.5■■■■□ 3.27
THSD4-207ENST00000620694 RBM33Q96EV2 1170 aaKnown RBP35.49■■■■□ 3.27
THSD4-207ENST00000620694 IFT172Q9UG01 1749 aa35.49■■■■□ 3.27
THSD4-207ENST00000620694 ALKQ9UM73 1620 aa35.46■■■■□ 3.27
THSD4-207ENST00000620694 DHX57Q6P158 1386 aaKnown RBP35.45■■■■□ 3.27
THSD4-207ENST00000620694 MYOM2P54296 1465 aa35.43■■■■□ 3.26
THSD4-207ENST00000620694 PIK3C2GO75747 1445 aa35.42■■■■□ 3.26
THSD4-207ENST00000620694 DCAF11Q8TEB1 546 aa35.41■■■■□ 3.26
THSD4-207ENST00000620694 KDM2AQ9Y2K7 1162 aa35.39■■■■□ 3.26
THSD4-207ENST00000620694 C14orf37Q86TY3 774 aa35.38■■■■□ 3.25
THSD4-207ENST00000620694 XIRP1Q702N8 1843 aaKnown RBP35.38■■■■□ 3.25
THSD4-207ENST00000620694 XRN1Q8IZH2 1706 aaKnown RBP35.37■■■■□ 3.25
THSD4-207ENST00000620694 SCAF1Q9H7N4 1312 aaKnown RBP35.37■■■■□ 3.25
THSD4-207ENST00000620694 NRXN1Q9ULB1 1477 aa35.37■■■■□ 3.25
THSD4-207ENST00000620694 PIP4K2BP78356 416 aa35.37■■■■□ 3.25
THSD4-207ENST00000620694 PCGF6Q9BYE7 350 aa35.37■■■■□ 3.25
THSD4-207ENST00000620694 NCOA3Q9Y6Q9 1424 aa35.37■■■■□ 3.25
THSD4-207ENST00000620694 SETD1AO15047 1707 aaKnown RBP35.37■■■■□ 3.25
THSD4-207ENST00000620694 MSH6P52701 1360 aa35.37■■■■□ 3.25
THSD4-207ENST00000620694 STAC3Q96MF2 364 aa35.36■■■■□ 3.25
THSD4-207ENST00000620694 C14orf93Q9H972 538 aaKnown RBP35.33■■■■□ 3.25
THSD4-207ENST00000620694 SIN3AQ96ST3 1273 aa35.31■■■■□ 3.24
THSD4-207ENST00000620694 CFAP70Q5T0N1 1121 aa35.3■■■■□ 3.24
THSD4-207ENST00000620694 TMEM132EQ6IEE7 984 aa35.28■■■■□ 3.24
THSD4-207ENST00000620694 PTCH1Q13635 1447 aa35.27■■■■□ 3.24
THSD4-207ENST00000620694 NEUROD1Q13562 356 aa35.27■■■■□ 3.24
THSD4-207ENST00000620694 C19orf44Q9H6X5 657 aa35.26■■■■□ 3.24
THSD4-207ENST00000620694 STK26Q9P289 416 aa35.26■■■■□ 3.24
THSD4-207ENST00000620694 PRAG1Q86YV5 1406 aa35.25■■■■□ 3.23
THSD4-207ENST00000620694 LRPPRCP42704 1394 aaKnown RBP35.25■■■■□ 3.23
THSD4-207ENST00000620694 ROBO2Q9HCK4 1378 aa35.25■■■■□ 3.23
THSD4-207ENST00000620694 ASXL1Q8IXJ9 1541 aa35.23■■■■□ 3.23
THSD4-207ENST00000620694 LAMC1P11047 1609 aa35.23■■■■□ 3.23
THSD4-207ENST00000620694 ATF3P18847 181 aa35.21■■■■□ 3.23
THSD4-207ENST00000620694 CADPS2Q86UW7 1296 aa35.2■■■■□ 3.23
THSD4-207ENST00000620694 ABCC11Q96J66 1382 aa35.19■■■■□ 3.22
THSD4-207ENST00000620694 YTHDC2Q9H6S0 1430 aaKnown RBP35.19■■■■□ 3.22
THSD4-207ENST00000620694 TECPR2O15040 1411 aa35.17■■■■□ 3.22
THSD4-207ENST00000620694 L3MBTL2Q969R5 705 aa35.16■■■■□ 3.22
THSD4-207ENST00000620694 SLAIN2Q9P270 581 aa35.16■■■■□ 3.22
THSD4-207ENST00000620694 ADGRL3Q9HAR2 1447 aa35.15■■■■□ 3.22
THSD4-207ENST00000620694 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.14■■■■□ 3.22
THSD4-207ENST00000620694 DCCP43146 1447 aa35.14■■■■□ 3.22
THSD4-207ENST00000620694 FAM135BQ49AJ0 1406 aa35.12■■■■□ 3.21
THSD4-207ENST00000620694 HSPA1LP34931 641 aa35.11■■■■□ 3.21
THSD4-207ENST00000620694 WAPLQ7Z5K2 1190 aa35.1■■■■□ 3.21
THSD4-207ENST00000620694 KNDC1Q76NI1 1749 aa35.09■■■■□ 3.21
THSD4-207ENST00000620694 ADGRB1O14514 1584 aa35.08■■■■□ 3.21
THSD4-207ENST00000620694 SIRT1Q96EB6 747 aa35.08■■■■□ 3.21
THSD4-207ENST00000620694 NALCNQ8IZF0 1738 aa35.06■■■■□ 3.2
THSD4-207ENST00000620694 PLEKHH1Q9ULM0 1364 aa35.04■■■■□ 3.2
THSD4-207ENST00000620694 TRAK1Q9UPV9 953 aa35.03■■■■□ 3.2
THSD4-207ENST00000620694 TONSLQ96HA7 1378 aa35.01■■■■□ 3.2
THSD4-207ENST00000620694 PRAM1Q96QH2 718 aa35■■■■□ 3.19
THSD4-207ENST00000620694 ROBO1Q9Y6N7 1651 aa35■■■■□ 3.19
THSD4-207ENST00000620694 MST1RQ04912 1400 aa34.99■■■■□ 3.19
THSD4-207ENST00000620694 POGKQ9P215 609 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms