RNA–Protein interactions for RNA: ENST00000615713.4

NICN1-208, Transcript of nicolin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NICN1, Length 1,921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-208ENST00000615713 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
NICN1-208ENST00000615713 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
NICN1-208ENST00000615713 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
NICN1-208ENST00000615713 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
NICN1-208ENST00000615713 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.66■□□□□ 0.42
NICN1-208ENST00000615713 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
NICN1-208ENST00000615713 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
NICN1-208ENST00000615713 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
NICN1-208ENST00000615713 PIP4K2BP78356 416 aa17.64■□□□□ 0.42
NICN1-208ENST00000615713 NUTM2DQ5VT03 806 aaPredicted RBP17.63■□□□□ 0.41
NICN1-208ENST00000615713 KCNA6P17658 529 aa17.62■□□□□ 0.41
NICN1-208ENST00000615713 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
NICN1-208ENST00000615713 TRPM2O94759 1503 aa17.62■□□□□ 0.41
NICN1-208ENST00000615713 ZNF326Q5BKZ1 582 aaKnown RBP17.59■□□□□ 0.41
NICN1-208ENST00000615713 TMEM94Q12767 1356 aa17.58■□□□□ 0.41
NICN1-208ENST00000615713 ALKQ9UM73 1620 aa17.58■□□□□ 0.4
NICN1-208ENST00000615713 TBX22Q9Y458 520 aa17.58■□□□□ 0.4
NICN1-208ENST00000615713 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
NICN1-208ENST00000615713 CLTCL1P53675 1640 aa17.58■□□□□ 0.4
NICN1-208ENST00000615713 NWD1Q149M9 1564 aa17.57■□□□□ 0.4
NICN1-208ENST00000615713 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
NICN1-208ENST00000615713 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
NICN1-208ENST00000615713 XIRP1Q702N8 1843 aaKnown RBP17.55■□□□□ 0.4
NICN1-208ENST00000615713 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
NICN1-208ENST00000615713 HSPA1LP34931 641 aa17.55■□□□□ 0.4
NICN1-208ENST00000615713 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
NICN1-208ENST00000615713 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
NICN1-208ENST00000615713 KIF1BO60333 1816 aa17.52■□□□□ 0.4
NICN1-208ENST00000615713 PIK3R4Q99570 1358 aa17.52■□□□□ 0.4
NICN1-208ENST00000615713 FOXD1Q16676 465 aa17.52■□□□□ 0.4
NICN1-208ENST00000615713 MPHOSPH9Q99550 1183 aa17.51■□□□□ 0.39
NICN1-208ENST00000615713 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
NICN1-208ENST00000615713 DISP3Q9P2K9 1392 aa17.51■□□□□ 0.39
NICN1-208ENST00000615713 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
NICN1-208ENST00000615713 NEXMIFQ5QGS0 1516 aa17.5■□□□□ 0.39
NICN1-208ENST00000615713 SETBP1Q9Y6X0 1596 aa17.5■□□□□ 0.39
NICN1-208ENST00000615713 HRCP23327 699 aa17.49■□□□□ 0.39
NICN1-208ENST00000615713 MSH6P52701 1360 aa17.49■□□□□ 0.39
NICN1-208ENST00000615713 NRXN3Q9Y4C0 1643 aa17.48■□□□□ 0.39
NICN1-208ENST00000615713 CCDC144AA2RUR9 1427 aa17.48■□□□□ 0.39
NICN1-208ENST00000615713 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
NICN1-208ENST00000615713 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
NICN1-208ENST00000615713 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.39
NICN1-208ENST00000615713 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
NICN1-208ENST00000615713 NCOA3Q9Y6Q9 1424 aa17.45■□□□□ 0.38
NICN1-208ENST00000615713 PTPRUQ92729 1446 aa17.45■□□□□ 0.38
NICN1-208ENST00000615713 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
NICN1-208ENST00000615713 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
NICN1-208ENST00000615713 METP08581 1390 aa17.44■□□□□ 0.38
NICN1-208ENST00000615713 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
NICN1-208ENST00000615713 C19orf44Q9H6X5 657 aa17.41■□□□□ 0.38
NICN1-208ENST00000615713 RGL3Q3MIN7 710 aa17.4■□□□□ 0.38
NICN1-208ENST00000615713 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
NICN1-208ENST00000615713 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.38
NICN1-208ENST00000615713 CADPS2Q86UW7 1296 aa17.39■□□□□ 0.37
NICN1-208ENST00000615713 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.37
NICN1-208ENST00000615713 PPLO60437 1756 aa17.38■□□□□ 0.37
NICN1-208ENST00000615713 ATF3P18847 181 aa17.38■□□□□ 0.37
NICN1-208ENST00000615713 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.36■□□□□ 0.37
NICN1-208ENST00000615713 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
NICN1-208ENST00000615713 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
NICN1-208ENST00000615713 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
NICN1-208ENST00000615713 SETD1AO15047 1707 aaKnown RBP17.34■□□□□ 0.37
NICN1-208ENST00000615713 DCCP43146 1447 aa17.34■□□□□ 0.37
NICN1-208ENST00000615713 ILDR2Q71H61 639 aa17.33■□□□□ 0.37
NICN1-208ENST00000615713 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
NICN1-208ENST00000615713 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
NICN1-208ENST00000615713 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
NICN1-208ENST00000615713 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
NICN1-208ENST00000615713 PRAG1Q86YV5 1406 aa17.29■□□□□ 0.36
NICN1-208ENST00000615713 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
NICN1-208ENST00000615713 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
NICN1-208ENST00000615713 PHLPP1O60346 1717 aa17.28■□□□□ 0.36
NICN1-208ENST00000615713 NALCNQ8IZF0 1738 aa17.27■□□□□ 0.36
NICN1-208ENST00000615713 BRINP3Q76B58 766 aa17.27■□□□□ 0.35
NICN1-208ENST00000615713 MST1RQ04912 1400 aa17.26■□□□□ 0.35
NICN1-208ENST00000615713 STK26Q9P289 416 aa17.24■□□□□ 0.35
NICN1-208ENST00000615713 JCADQ9P266 1359 aa17.24■□□□□ 0.35
NICN1-208ENST00000615713 MYOM2P54296 1465 aa17.24■□□□□ 0.35
NICN1-208ENST00000615713 COL16A1Q07092 1604 aaPredicted RBP17.24■□□□□ 0.35
NICN1-208ENST00000615713 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
NICN1-208ENST00000615713 AHDC1Q5TGY3 1603 aaPredicted RBP17.23■□□□□ 0.35
NICN1-208ENST00000615713 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
NICN1-208ENST00000615713 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
NICN1-208ENST00000615713 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
NICN1-208ENST00000615713 TECPR2O15040 1411 aa17.22■□□□□ 0.35
NICN1-208ENST00000615713 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
NICN1-208ENST00000615713 ABCC11Q96J66 1382 aa17.21■□□□□ 0.35
NICN1-208ENST00000615713 YTHDC2Q9H6S0 1430 aaKnown RBP17.2■□□□□ 0.34
NICN1-208ENST00000615713 SOCS7O14512 581 aa17.19■□□□□ 0.34
NICN1-208ENST00000615713 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
NICN1-208ENST00000615713 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
NICN1-208ENST00000615713 LAMC1P11047 1609 aa17.19■□□□□ 0.34
NICN1-208ENST00000615713 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
NICN1-208ENST00000615713 DCAF11Q8TEB1 546 aa17.17■□□□□ 0.34
NICN1-208ENST00000615713 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
NICN1-208ENST00000615713 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
NICN1-208ENST00000615713 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
NICN1-208ENST00000615713 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
NICN1-208ENST00000615713 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms