RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 FANCAO15360 1455 aa12.24□□□□□ -0.45
TNFRSF9-204ENST00000615230 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
TNFRSF9-204ENST00000615230 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
TNFRSF9-204ENST00000615230 ADAMTS12P58397 1594 aa12.23□□□□□ -0.45
TNFRSF9-204ENST00000615230 PPP4R2Q9NY27 417 aa12.23□□□□□ -0.45
TNFRSF9-204ENST00000615230 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
TNFRSF9-204ENST00000615230 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 SMC4Q9NTJ3 1288 aa12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
TNFRSF9-204ENST00000615230 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 PANK3Q9H999 370 aa12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 ITPRIPQ8IWB1 547 aa12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 ZNF644Q9H582 1327 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF9-204ENST00000615230 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.46
TNFRSF9-204ENST00000615230 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 FAM135AQ9P2D6 1515 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 ST20-MTHFSA0A0A6YYL1 179 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 GNL2Q13823 731 aaKnown RBP12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 CTTNBP2Q8WZ74 1663 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 RTEL1-TNFRSF6BF6WH68 1400 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 RAPGEF3O95398 923 aa12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF9-204ENST00000615230 CCDC34Q96HJ3 373 aa12.19□□□□□ -0.46
TNFRSF9-204ENST00000615230 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
TNFRSF9-204ENST00000615230 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
TNFRSF9-204ENST00000615230 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
TNFRSF9-204ENST00000615230 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
TNFRSF9-204ENST00000615230 PTMSP20962 102 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 NLRP6P59044 892 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
TNFRSF9-204ENST00000615230 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF9-204ENST00000615230 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
TNFRSF9-204ENST00000615230 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
TNFRSF9-204ENST00000615230 E9PSI1 815 aa12.17□□□□□ -0.46
TNFRSF9-204ENST00000615230 NRDCO43847 1150 aa12.16□□□□□ -0.46
TNFRSF9-204ENST00000615230 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
TNFRSF9-204ENST00000615230 HSCBQ8IWL3 235 aa12.16□□□□□ -0.46
TNFRSF9-204ENST00000615230 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
TNFRSF9-204ENST00000615230 GNAI1P63096 354 aa12.15□□□□□ -0.46
TNFRSF9-204ENST00000615230 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
TNFRSF9-204ENST00000615230 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF9-204ENST00000615230 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
TNFRSF9-204ENST00000615230 GOLGA6L4A6NEF3 574 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 KIF3AQ9Y496 699 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 TNRQ92752 1358 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 PLCH2O75038 1416 aa12.14□□□□□ -0.47
TNFRSF9-204ENST00000615230 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
TNFRSF9-204ENST00000615230 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 PRAM1Q96QH2 718 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 KIAA0556O60303 1618 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 TOM1O60784 492 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 PIP4K2BP78356 416 aa12.12□□□□□ -0.47
TNFRSF9-204ENST00000615230 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
TNFRSF9-204ENST00000615230 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
TNFRSF9-204ENST00000615230 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
TNFRSF9-204ENST00000615230 MSH6P52701 1360 aa12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 AAMPQ13685 434 aa12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 TOM1L2Q6ZVM7 507 aa12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
TNFRSF9-204ENST00000615230 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
TNFRSF9-204ENST00000615230 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
TNFRSF9-204ENST00000615230 ABCC2Q92887 1545 aa12.09□□□□□ -0.47
TNFRSF9-204ENST00000615230 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
TNFRSF9-204ENST00000615230 CWC22Q9HCG8 908 aaKnown RBP12.08□□□□□ -0.47
TNFRSF9-204ENST00000615230 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
TNFRSF9-204ENST00000615230 NINLQ9Y2I6 1382 aa12.08□□□□□ -0.48
TNFRSF9-204ENST00000615230 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
TNFRSF9-204ENST00000615230 RGS3P49796 1198 aa12.08□□□□□ -0.48
TNFRSF9-204ENST00000615230 IRX6P78412 446 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF9-204ENST00000615230 CLSTN1O94985 981 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 RUFY2Q8WXA3 655 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
TNFRSF9-204ENST00000615230 CADPS2Q86UW7 1296 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms