RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 PLEKHG1Q9ULL1 1385 aa26.02■■□□□ 1.76
CCL3-204ENST00000613922 KCNA6P17658 529 aa26.01■■□□□ 1.75
CCL3-204ENST00000613922 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
CCL3-204ENST00000613922 SLC26A8Q96RN1 970 aa26.01■■□□□ 1.75
CCL3-204ENST00000613922 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
CCL3-204ENST00000613922 HDGFP51858 240 aaKnown RBP26■■□□□ 1.75
CCL3-204ENST00000613922 HFM1A2PYH4 1435 aa25.98■■□□□ 1.75
CCL3-204ENST00000613922 DISP3Q9P2K9 1392 aa25.98■■□□□ 1.75
CCL3-204ENST00000613922 CHD2O14647 1828 aaKnown RBP25.98■■□□□ 1.75
CCL3-204ENST00000613922 CHGAP10645 457 aaKnown RBP25.98■■□□□ 1.75
CCL3-204ENST00000613922 HSPA1LP34931 641 aa25.97■■□□□ 1.75
CCL3-204ENST00000613922 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.96■■□□□ 1.75
CCL3-204ENST00000613922 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
CCL3-204ENST00000613922 NKTRP30414 1462 aaKnown RBP25.95■■□□□ 1.74
CCL3-204ENST00000613922 BCANQ96GW7 911 aa25.93■■□□□ 1.74
CCL3-204ENST00000613922 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
CCL3-204ENST00000613922 DIP2AQ14689 1571 aa25.91■■□□□ 1.74
CCL3-204ENST00000613922 ADAMTS13Q76LX8 1427 aa25.9■■□□□ 1.74
CCL3-204ENST00000613922 TRPM2O94759 1503 aa25.9■■□□□ 1.74
CCL3-204ENST00000613922 TBX22Q9Y458 520 aa25.9■■□□□ 1.74
CCL3-204ENST00000613922 CLTCL1P53675 1640 aa25.89■■□□□ 1.74
CCL3-204ENST00000613922 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
CCL3-204ENST00000613922 NUTM2DQ5VT03 806 aaPredicted RBP25.87■■□□□ 1.73
CCL3-204ENST00000613922 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
CCL3-204ENST00000613922 KIF1BO60333 1816 aa25.86■■□□□ 1.73
CCL3-204ENST00000613922 PIK3R4Q99570 1358 aa25.83■■□□□ 1.73
CCL3-204ENST00000613922 NRXN3Q9Y4C0 1643 aa25.83■■□□□ 1.73
CCL3-204ENST00000613922 ILDR2Q71H61 639 aa25.82■■□□□ 1.72
CCL3-204ENST00000613922 TRIM52Q96A61 297 aa25.82■■□□□ 1.72
CCL3-204ENST00000613922 RBM33Q96EV2 1170 aaKnown RBP25.82■■□□□ 1.72
CCL3-204ENST00000613922 FAM135BQ49AJ0 1406 aa25.81■■□□□ 1.72
CCL3-204ENST00000613922 MED1Q15648 1581 aaPredicted RBP25.81■■□□□ 1.72
CCL3-204ENST00000613922 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
CCL3-204ENST00000613922 NEXMIFQ5QGS0 1516 aa25.79■■□□□ 1.72
CCL3-204ENST00000613922 NCOA3Q9Y6Q9 1424 aa25.79■■□□□ 1.72
CCL3-204ENST00000613922 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
CCL3-204ENST00000613922 MSH6P52701 1360 aa25.77■■□□□ 1.72
CCL3-204ENST00000613922 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
CCL3-204ENST00000613922 SLC4A1APQ9BWU0 796 aaKnown RBP25.76■■□□□ 1.71
CCL3-204ENST00000613922 PTPRUQ92729 1446 aa25.75■■□□□ 1.71
CCL3-204ENST00000613922 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
CCL3-204ENST00000613922 AMOTL2Q9Y2J4 779 aa25.7■■□□□ 1.7
CCL3-204ENST00000613922 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.7■■□□□ 1.7
CCL3-204ENST00000613922 PPLO60437 1756 aa25.67■■□□□ 1.7
CCL3-204ENST00000613922 SLAIN2Q9P270 581 aa25.67■■□□□ 1.7
CCL3-204ENST00000613922 METP08581 1390 aa25.66■■□□□ 1.7
CCL3-204ENST00000613922 SETD1AO15047 1707 aaKnown RBP25.66■■□□□ 1.7
CCL3-204ENST00000613922 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
CCL3-204ENST00000613922 FOXD1Q16676 465 aa25.63■■□□□ 1.69
CCL3-204ENST00000613922 C19orf44Q9H6X5 657 aa25.63■■□□□ 1.69
CCL3-204ENST00000613922 SOCS7O14512 581 aa25.62■■□□□ 1.69
CCL3-204ENST00000613922 C14orf37Q86TY3 774 aa25.62■■□□□ 1.69
CCL3-204ENST00000613922 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
CCL3-204ENST00000613922 PHLPP1O60346 1717 aa25.62■■□□□ 1.69
CCL3-204ENST00000613922 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
CCL3-204ENST00000613922 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
CCL3-204ENST00000613922 CADPS2Q86UW7 1296 aa25.6■■□□□ 1.69
CCL3-204ENST00000613922 SETD5Q9C0A6 1442 aa25.6■■□□□ 1.69
CCL3-204ENST00000613922 DCCP43146 1447 aa25.59■■□□□ 1.69
CCL3-204ENST00000613922 CCDC144AA2RUR9 1427 aa25.58■■□□□ 1.69
CCL3-204ENST00000613922 ATF3P18847 181 aa25.56■■□□□ 1.68
CCL3-204ENST00000613922 IFT172Q9UG01 1749 aa25.56■■□□□ 1.68
CCL3-204ENST00000613922 SPATA31E1Q6ZUB1 1445 aa25.55■■□□□ 1.68
CCL3-204ENST00000613922 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
CCL3-204ENST00000613922 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
CCL3-204ENST00000613922 PHF23Q9BUL5 403 aaPredicted RBP25.53■■□□□ 1.68
CCL3-204ENST00000613922 NALCNQ8IZF0 1738 aa25.53■■□□□ 1.68
CCL3-204ENST00000613922 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
CCL3-204ENST00000613922 PTCH1Q13635 1447 aa25.52■■□□□ 1.68
CCL3-204ENST00000613922 ADGRL3Q9HAR2 1447 aa25.51■■□□□ 1.67
CCL3-204ENST00000613922 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
CCL3-204ENST00000613922 MST1RQ04912 1400 aa25.48■■□□□ 1.67
CCL3-204ENST00000613922 JCADQ9P266 1359 aa25.47■■□□□ 1.67
CCL3-204ENST00000613922 ANKRD30BQ9BXX2 1392 aa25.46■■□□□ 1.67
CCL3-204ENST00000613922 ADGRF5Q8IZF2 1346 aa25.46■■□□□ 1.67
CCL3-204ENST00000613922 BRINP3Q76B58 766 aa25.46■■□□□ 1.67
CCL3-204ENST00000613922 RGL3Q3MIN7 710 aa25.45■■□□□ 1.66
CCL3-204ENST00000613922 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
CCL3-204ENST00000613922 ASXL1Q8IXJ9 1541 aa25.44■■□□□ 1.66
CCL3-204ENST00000613922 RGS17Q9UGC6 210 aaPredicted RBP25.44■■□□□ 1.66
CCL3-204ENST00000613922 NHSL1Q5SYE7 1610 aa25.43■■□□□ 1.66
CCL3-204ENST00000613922 SHPRHQ149N8 1683 aa25.42■■□□□ 1.66
CCL3-204ENST00000613922 PIK3C2GO75747 1445 aa25.39■■□□□ 1.66
CCL3-204ENST00000613922 KNDC1Q76NI1 1749 aa25.37■■□□□ 1.65
CCL3-204ENST00000613922 C1orf167Q5SNV9 1468 aa25.36■■□□□ 1.65
CCL3-204ENST00000613922 HRCP23327 699 aa25.36■■□□□ 1.65
CCL3-204ENST00000613922 TECPR2O15040 1411 aa25.36■■□□□ 1.65
CCL3-204ENST00000613922 SPATA31A6Q5VVP1 1343 aa25.36■■□□□ 1.65
CCL3-204ENST00000613922 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
CCL3-204ENST00000613922 LAMC1P11047 1609 aa25.34■■□□□ 1.65
CCL3-204ENST00000613922 MYOM2P54296 1465 aa25.34■■□□□ 1.65
CCL3-204ENST00000613922 LRPPRCP42704 1394 aaKnown RBP25.33■■□□□ 1.65
CCL3-204ENST00000613922 LRP6O75581 1613 aa25.33■■□□□ 1.65
CCL3-204ENST00000613922 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
CCL3-204ENST00000613922 CDC42BPGQ6DT37 1551 aa25.31■■□□□ 1.64
CCL3-204ENST00000613922 POTEAQ6S8J7 498 aa25.29■■□□□ 1.64
CCL3-204ENST00000613922 TMEM132EQ6IEE7 984 aa25.28■■□□□ 1.64
CCL3-204ENST00000613922 C14orf93Q9H972 538 aaKnown RBP25.28■■□□□ 1.64
CCL3-204ENST00000613922 STK26Q9P289 416 aa25.27■■□□□ 1.64
CCL3-204ENST00000613922 YTHDC2Q9H6S0 1430 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms