RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ZFYVE9O95405 1425 aa38.7■■■■□ 3.79
VEGFA-226ENST00000611736 ACIN1Q9UKV3 1341 aaKnown RBP38.69■■■■□ 3.78
VEGFA-226ENST00000611736 PPP1R15AO75807 674 aaPredicted RBP38.64■■■■□ 3.78
VEGFA-226ENST00000611736 HDGFP51858 240 aaKnown RBP38.63■■■■□ 3.77
VEGFA-226ENST00000611736 SENP3Q9H4L4 574 aaPredicted RBP38.63■■■■□ 3.77
VEGFA-226ENST00000611736 NUTM2DQ5VT03 806 aaPredicted RBP38.62■■■■□ 3.77
VEGFA-226ENST00000611736 IQSEC2Q5JU85 1478 aa38.61■■■■□ 3.77
VEGFA-226ENST00000611736 BCANQ96GW7 911 aa38.6■■■■□ 3.77
VEGFA-226ENST00000611736 KIF1BO60333 1816 aa38.59■■■■□ 3.77
VEGFA-226ENST00000611736 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.59■■■■□ 3.77
VEGFA-226ENST00000611736 ZNF326Q5BKZ1 582 aaKnown RBP38.58■■■■□ 3.77
VEGFA-226ENST00000611736 SLC26A8Q96RN1 970 aa38.56■■■■□ 3.76
VEGFA-226ENST00000611736 PLEKHG1Q9ULL1 1385 aa38.56■■■■□ 3.76
VEGFA-226ENST00000611736 CPS1P31327 1500 aa38.55■■■■□ 3.76
VEGFA-226ENST00000611736 STRCP1A6NGW2 1772 aa38.53■■■■□ 3.76
VEGFA-226ENST00000611736 HRCP23327 699 aa38.49■■■■□ 3.75
VEGFA-226ENST00000611736 CCDC144AA2RUR9 1427 aa38.47■■■■□ 3.75
VEGFA-226ENST00000611736 NEXMIFQ5QGS0 1516 aa38.43■■■■□ 3.74
VEGFA-226ENST00000611736 LRRC7Q96NW7 1537 aa38.38■■■■□ 3.73
VEGFA-226ENST00000611736 ADAMTS13Q76LX8 1427 aa38.38■■■■□ 3.73
VEGFA-226ENST00000611736 KCNA6P17658 529 aa38.36■■■■□ 3.73
VEGFA-226ENST00000611736 TBX22Q9Y458 520 aa38.35■■■■□ 3.73
VEGFA-226ENST00000611736 DIP2AQ14689 1571 aa38.33■■■■□ 3.73
VEGFA-226ENST00000611736 UBAP1LF5GYI3 381 aa38.31■■■■□ 3.72
VEGFA-226ENST00000611736 RGL3Q3MIN7 710 aa38.31■■■■□ 3.72
VEGFA-226ENST00000611736 RPGRIP1LQ68CZ1 1315 aa38.31■■■■□ 3.72
VEGFA-226ENST00000611736 NRXN3Q9Y4C0 1643 aa38.3■■■■□ 3.72
VEGFA-226ENST00000611736 SPATA31E1Q6ZUB1 1445 aa38.3■■■■□ 3.72
VEGFA-226ENST00000611736 NWD1Q149M9 1564 aa38.3■■■■□ 3.72
VEGFA-226ENST00000611736 SETBP1Q9Y6X0 1596 aa38.3■■■■□ 3.72
VEGFA-226ENST00000611736 PPLO60437 1756 aa38.29■■■■□ 3.72
VEGFA-226ENST00000611736 CHD2O14647 1828 aaKnown RBP38.28■■■■□ 3.72
VEGFA-226ENST00000611736 ANKRD30BQ9BXX2 1392 aa38.27■■■■□ 3.72
VEGFA-226ENST00000611736 VGFO15240 615 aaPredicted RBP38.26■■■■□ 3.72
VEGFA-226ENST00000611736 NKTRP30414 1462 aaKnown RBP38.23■■■■□ 3.71
VEGFA-226ENST00000611736 XIRP1Q702N8 1843 aaKnown RBP38.22■■■■□ 3.71
VEGFA-226ENST00000611736 TRIM26Q12899 539 aaPredicted RBP38.22■■■■□ 3.71
VEGFA-226ENST00000611736 PROSER2Q86WR7 435 aaPredicted RBP38.22■■■■□ 3.71
VEGFA-226ENST00000611736 TMEM94Q12767 1356 aa38.2■■■■□ 3.71
VEGFA-226ENST00000611736 PIK3R4Q99570 1358 aa38.2■■■■□ 3.71
VEGFA-226ENST00000611736 RBM33Q96EV2 1170 aaKnown RBP38.19■■■■□ 3.7
VEGFA-226ENST00000611736 TOM1O60784 492 aa38.17■■■■□ 3.7
VEGFA-226ENST00000611736 IFT172Q9UG01 1749 aa38.16■■■■□ 3.7
VEGFA-226ENST00000611736 PTPRUQ92729 1446 aa38.16■■■■□ 3.7
VEGFA-226ENST00000611736 METP08581 1390 aa38.15■■■■□ 3.7
VEGFA-226ENST00000611736 AMOTL2Q9Y2J4 779 aa38.13■■■■□ 3.69
VEGFA-226ENST00000611736 ADGRF5Q8IZF2 1346 aa38.12■■■■□ 3.69
VEGFA-226ENST00000611736 SCAF1Q9H7N4 1312 aaKnown RBP38.12■■■■□ 3.69
VEGFA-226ENST00000611736 PIP4K2BP78356 416 aa38.11■■■■□ 3.69
VEGFA-226ENST00000611736 ALKQ9UM73 1620 aa38.09■■■■□ 3.69
VEGFA-226ENST00000611736 SETD1AO15047 1707 aaKnown RBP38.07■■■■□ 3.69
VEGFA-226ENST00000611736 XRN1Q8IZH2 1706 aaKnown RBP38.07■■■■□ 3.68
VEGFA-226ENST00000611736 MSH6P52701 1360 aa37.99■■■■□ 3.67
VEGFA-226ENST00000611736 C14orf37Q86TY3 774 aa37.99■■■■□ 3.67
VEGFA-226ENST00000611736 PIK3C2GO75747 1445 aa37.98■■■■□ 3.67
VEGFA-226ENST00000611736 MYOM2P54296 1465 aa37.96■■■■□ 3.67
VEGFA-226ENST00000611736 NCOA3Q9Y6Q9 1424 aa37.95■■■■□ 3.67
VEGFA-226ENST00000611736 NRXN1Q9ULB1 1477 aa37.92■■■■□ 3.66
VEGFA-226ENST00000611736 DCAF11Q8TEB1 546 aa37.9■■■■□ 3.66
VEGFA-226ENST00000611736 KDM2AQ9Y2K7 1162 aa37.9■■■■□ 3.66
VEGFA-226ENST00000611736 DHX57Q6P158 1386 aaKnown RBP37.86■■■■□ 3.65
VEGFA-226ENST00000611736 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.86■■■■□ 3.65
VEGFA-226ENST00000611736 PTCH1Q13635 1447 aa37.86■■■■□ 3.65
VEGFA-226ENST00000611736 TMEM132EQ6IEE7 984 aa37.85■■■■□ 3.65
VEGFA-226ENST00000611736 C19orf44Q9H6X5 657 aa37.85■■■■□ 3.65
VEGFA-226ENST00000611736 ASXL1Q8IXJ9 1541 aa37.85■■■■□ 3.65
VEGFA-226ENST00000611736 ROBO2Q9HCK4 1378 aa37.84■■■■□ 3.65
VEGFA-226ENST00000611736 HSPA1LP34931 641 aa37.84■■■■□ 3.65
VEGFA-226ENST00000611736 C14orf93Q9H972 538 aaKnown RBP37.84■■■■□ 3.65
VEGFA-226ENST00000611736 CFAP70Q5T0N1 1121 aa37.83■■■■□ 3.65
VEGFA-226ENST00000611736 STK26Q9P289 416 aa37.83■■■■□ 3.65
VEGFA-226ENST00000611736 DISP3Q9P2K9 1392 aa37.81■■■■□ 3.64
VEGFA-226ENST00000611736 LAMC1P11047 1609 aa37.8■■■■□ 3.64
VEGFA-226ENST00000611736 PRAG1Q86YV5 1406 aa37.8■■■■□ 3.64
VEGFA-226ENST00000611736 ATF3P18847 181 aa37.8■■■■□ 3.64
VEGFA-226ENST00000611736 LRPPRCP42704 1394 aaKnown RBP37.79■■■■□ 3.64
VEGFA-226ENST00000611736 SLAIN2Q9P270 581 aa37.78■■■■□ 3.64
VEGFA-226ENST00000611736 CADPS2Q86UW7 1296 aa37.77■■■■□ 3.64
VEGFA-226ENST00000611736 SIN3AQ96ST3 1273 aa37.77■■■■□ 3.64
VEGFA-226ENST00000611736 FAM135BQ49AJ0 1406 aa37.77■■■■□ 3.64
VEGFA-226ENST00000611736 ADGRL3Q9HAR2 1447 aa37.77■■■■□ 3.64
VEGFA-226ENST00000611736 NALCNQ8IZF0 1738 aa37.76■■■■□ 3.64
VEGFA-226ENST00000611736 STAC3Q96MF2 364 aa37.76■■■■□ 3.64
VEGFA-226ENST00000611736 YTHDC2Q9H6S0 1430 aaKnown RBP37.75■■■■□ 3.63
VEGFA-226ENST00000611736 ROBO1Q9Y6N7 1651 aa37.75■■■■□ 3.63
VEGFA-226ENST00000611736 TECPR2O15040 1411 aa37.72■■■■□ 3.63
VEGFA-226ENST00000611736 DCCP43146 1447 aa37.72■■■■□ 3.63
VEGFA-226ENST00000611736 NEUROD1Q13562 356 aa37.72■■■■□ 3.63
VEGFA-226ENST00000611736 KNDC1Q76NI1 1749 aa37.72■■■■□ 3.63
VEGFA-226ENST00000611736 ABCC11Q96J66 1382 aa37.71■■■■□ 3.63
VEGFA-226ENST00000611736 WAPLQ7Z5K2 1190 aa37.67■■■■□ 3.62
VEGFA-226ENST00000611736 PCGF6Q9BYE7 350 aa37.67■■■■□ 3.62
VEGFA-226ENST00000611736 ADGRB1O14514 1584 aa37.63■■■■□ 3.62
VEGFA-226ENST00000611736 PLEKHH1Q9ULM0 1364 aa37.63■■■■□ 3.61
VEGFA-226ENST00000611736 MST1RQ04912 1400 aa37.61■■■■□ 3.61
VEGFA-226ENST00000611736 L3MBTL2Q969R5 705 aa37.61■■■■□ 3.61
VEGFA-226ENST00000611736 SIRT1Q96EB6 747 aa37.55■■■■□ 3.6
VEGFA-226ENST00000611736 TRAK1Q9UPV9 953 aa37.54■■■■□ 3.6
VEGFA-226ENST00000611736 BRINP3Q76B58 766 aa37.53■■■■□ 3.6
VEGFA-226ENST00000611736 DLC1Q96QB1 1528 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms