RNA–Protein interactions for RNA: ENST00000611553.4

CBWD6-211, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-211ENST00000611553 ZFYVE27Q5T4F4 411 aa5.31□□□□□ -1.56
CBWD6-211ENST00000611553 UTP14CQ5TAP6 766 aaKnown RBP5.31□□□□□ -1.56
CBWD6-211ENST00000611553 POTEGQ6S5H5 508 aa5.31□□□□□ -1.56
CBWD6-211ENST00000611553 ARMCX6Q7L4S7 300 aa5.31□□□□□ -1.56
CBWD6-211ENST00000611553 SREK1Q8WXA9 508 aaKnown RBP5.31□□□□□ -1.56
CBWD6-211ENST00000611553 SPOCK2Q92563 424 aa5.31□□□□□ -1.56
CBWD6-211ENST00000611553 SH3BP5O60239 455 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 MAP4K4O95819 1239 aaPredicted RBP5.3□□□□□ -1.56
CBWD6-211ENST00000611553 CC2D1BQ5T0F9 858 aaKnown RBP5.3□□□□□ -1.56
CBWD6-211ENST00000611553 ARIH1Q9Y4X5 557 aaPredicted RBP5.3□□□□□ -1.56
CBWD6-211ENST00000611553 LIG1P18858 919 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 POLD1P28340 1107 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 ZNF662Q6ZS27 426 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 OTUD6BQ8N6M0 293 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 TSPAN18Q96SJ8 248 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 KDM4CQ9H3R0 1056 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 PNMA2Q9UL42 364 aa5.3□□□□□ -1.56
CBWD6-211ENST00000611553 NBPF9Q3BBW0 867 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 EGFL6Q8IUX8 553 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 PLCD3Q8N3E9 789 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 KCNV2Q8TDN2 545 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 PDCL3Q9H2J4 239 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 PPP1R1BQ9UD71 204 aaPredicted RBP5.29□□□□□ -1.56
CBWD6-211ENST00000611553 ZRANB1Q9UGI0 708 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 CREB3O43889 395 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 HDAC1Q13547 482 aaPredicted RBP5.29□□□□□ -1.56
CBWD6-211ENST00000611553 SETDB1Q15047 1291 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 TSR1Q2NL82 804 aaKnown RBP5.29□□□□□ -1.56
CBWD6-211ENST00000611553 SMC5Q8IY18 1101 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 SMAP1Q8IYB5 467 aaPredicted RBP5.29□□□□□ -1.56
CBWD6-211ENST00000611553 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
CBWD6-211ENST00000611553 SSFA2P28290 1259 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 CCDC181Q5TID7 509 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 ZMYND10O75800 440 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 KIF4AO95239 1232 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 SLC20A2Q08357 652 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 METTL14Q9HCE5 456 aaKnown RBP5.28□□□□□ -1.56
CBWD6-211ENST00000611553 NUB1Q9Y5A7 615 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 ZRANB2O95218 330 aaKnown RBP eCLIP5.28□□□□□ -1.56
CBWD6-211ENST00000611553 OTUD5Q96G74 571 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 CARD10Q9BWT7 1032 aa5.28□□□□□ -1.56
CBWD6-211ENST00000611553 EXOC5O00471 708 aa5.27□□□□□ -1.57
CBWD6-211ENST00000611553 SEMA3FQ13275 785 aa5.27□□□□□ -1.57
CBWD6-211ENST00000611553 ZNF280DQ6N043 979 aa5.27□□□□□ -1.57
CBWD6-211ENST00000611553 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
CBWD6-211ENST00000611553 HSP90AA1P07900 732 aaKnown RBP5.27□□□□□ -1.57
CBWD6-211ENST00000611553 PAX3P23760 479 aa5.27□□□□□ -1.57
CBWD6-211ENST00000611553 GIMAP6Q6P9H5 292 aa5.27□□□□□ -1.57
CBWD6-211ENST00000611553 ZNF579Q8NAF0 562 aaKnown RBP5.27□□□□□ -1.57
CBWD6-211ENST00000611553 KCNA1Q09470 495 aa5.26□□□□□ -1.57
CBWD6-211ENST00000611553 HSP90AB3PQ58FF7 597 aa5.26□□□□□ -1.57
CBWD6-211ENST00000611553 CLEC4GQ6UXB4 293 aa5.26□□□□□ -1.57
CBWD6-211ENST00000611553 STK24Q9Y6E0 443 aa5.26□□□□□ -1.57
CBWD6-211ENST00000611553 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
CBWD6-211ENST00000611553 DHX16O60231 1041 aaKnown RBP5.26□□□□□ -1.57
CBWD6-211ENST00000611553 CACTIN-AS1Q8N1I8 211 aa5.26□□□□□ -1.57
CBWD6-211ENST00000611553 KIAA1522Q9P206 1035 aaPredicted RBP5.26□□□□□ -1.57
CBWD6-211ENST00000611553 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
CBWD6-211ENST00000611553 GOLGA6CA6NDK9 693 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 GOLGA6BA6NDN3 693 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 GTPBP6O43824 516 aaPredicted RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 ONECUT3O60422 494 aaPredicted RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 PAK3O75914 559 aaPredicted RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 GOLGA6DP0CG33 693 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 TCF3P15923 654 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 MSL3Q8N5Y2 521 aaKnown RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 MKL1Q969V6 931 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 GOLGA6AQ9NYA3 693 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 CSPP1Q1MSJ5 1256 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 UBXN4Q92575 508 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 CCDC85AQ96PX6 553 aaPredicted RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 KLHL42Q9P2K6 505 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 FRMD4BQ9Y2L6 1034 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 ANP32AP39687 249 aaKnown RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 RHBDL3P58872 404 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 MRRFQ96E11 262 aaKnown RBP5.25□□□□□ -1.57
CBWD6-211ENST00000611553 MAF1Q9H063 256 aa5.25□□□□□ -1.57
CBWD6-211ENST00000611553 RBM47A0AV96 593 aaKnown RBP5.24□□□□□ -1.57
CBWD6-211ENST00000611553 APLP1P51693 650 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 NKX1-1Q15270 411 aaPredicted RBP5.24□□□□□ -1.57
CBWD6-211ENST00000611553 MAMSTRQ6ZN01 415 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 GET4Q7L5D6 327 aaPredicted RBP5.24□□□□□ -1.57
CBWD6-211ENST00000611553 ARHGEF1Q92888 912 aaKnown RBP5.24□□□□□ -1.57
CBWD6-211ENST00000611553 SPOCK3Q9BQ16 436 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 SPDYE4A6NLX3 237 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 ZKSCAN2Q63HK3 967 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 CREBRFQ8IUR6 639 aa5.24□□□□□ -1.57
CBWD6-211ENST00000611553 CDCA7Q9BWT1 371 aaPredicted RBP5.24□□□□□ -1.57
CBWD6-211ENST00000611553 EIF3JO75822 258 aaKnown RBP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 PMM1Q92871 262 aa5.23□□□□□ -1.57
CBWD6-211ENST00000611553 VTI1AQ96AJ9 217 aa5.23□□□□□ -1.57
CBWD6-211ENST00000611553 GALR2O43603 387 aaPredicted RBP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 SCP2P22307 547 aa5.23□□□□□ -1.57
CBWD6-211ENST00000611553 SND1Q7KZF4 910 aaKnown RBP eCLIP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 DDX46Q7L014 1031 aaKnown RBP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 PROSER2Q86WR7 435 aaPredicted RBP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 HELBQ8NG08 1087 aaPredicted RBP5.23□□□□□ -1.57
CBWD6-211ENST00000611553 DDRGK1Q96HY6 314 aa5.23□□□□□ -1.57
CBWD6-211ENST00000611553 YY1AP1Q9H869 796 aa5.23□□□□□ -1.57
CBWD6-211ENST00000611553 JADE2Q9NQC1 790 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms