RNA–Protein interactions for RNA: ENST00000611553.4

CBWD6-211, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-211ENST00000611553 AEBP2Q6ZN18 517 aaPredicted RBP10.49□□□□□ -0.73
CBWD6-211ENST00000611553 CHIC1Q5VXU3 224 aa9.91□□□□□ -0.82
CBWD6-211ENST00000611553 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
CBWD6-211ENST00000611553 PHF23Q9BUL5 403 aaPredicted RBP8.9□□□□□ -0.98
CBWD6-211ENST00000611553 POTEDQ86YR6 584 aa8.67□□□□□ -1.02
CBWD6-211ENST00000611553 FOXD1Q16676 465 aa8.46□□□□□ -1.06
CBWD6-211ENST00000611553 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
CBWD6-211ENST00000611553 MSH5O43196 834 aa8.1□□□□□ -1.11
CBWD6-211ENST00000611553 PIAS4Q8N2W9 510 aaPredicted RBP7.89□□□□□ -1.15
CBWD6-211ENST00000611553 MYT1Q01538 1121 aa7.68□□□□□ -1.18
CBWD6-211ENST00000611553 PLPPR3Q6T4P5 718 aa7.65□□□□□ -1.19
CBWD6-211ENST00000611553 ADRA2BP18089 450 aa7.63□□□□□ -1.19
CBWD6-211ENST00000611553 PPP6R1Q9UPN7 881 aa7.63□□□□□ -1.19
CBWD6-211ENST00000611553 TTBK1Q5TCY1 1321 aaPredicted RBP7.62□□□□□ -1.19
CBWD6-211ENST00000611553 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
CBWD6-211ENST00000611553 PELP1Q8IZL8 1130 aaKnown RBP7.51□□□□□ -1.21
CBWD6-211ENST00000611553 EHMT2Q96KQ7 1210 aa7.43□□□□□ -1.22
CBWD6-211ENST00000611553 ERICH6Q7L0X2 663 aa7.38□□□□□ -1.23
CBWD6-211ENST00000611553 APLP2Q06481 763 aa7.36□□□□□ -1.23
CBWD6-211ENST00000611553 NCBP3Q53F19 620 aaKnown RBP7.36□□□□□ -1.23
CBWD6-211ENST00000611553 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
CBWD6-211ENST00000611553 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
CBWD6-211ENST00000611553 CACNB1Q02641 598 aaPredicted RBP7.19□□□□□ -1.26
CBWD6-211ENST00000611553 AMER1Q5JTC6 1135 aaPredicted RBP7.16□□□□□ -1.26
CBWD6-211ENST00000611553 ARXQ96QS3 562 aa7.13□□□□□ -1.27
CBWD6-211ENST00000611553 DMRT2Q9Y5R5 561 aa7.11□□□□□ -1.27
CBWD6-211ENST00000611553 MAPK8IP2Q13387 824 aaPredicted RBP7.1□□□□□ -1.27
CBWD6-211ENST00000611553 SCAF1Q9H7N4 1312 aaKnown RBP7.07□□□□□ -1.28
CBWD6-211ENST00000611553 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
CBWD6-211ENST00000611553 DCAF8L1A6NGE4 600 aa6.97□□□□□ -1.29
CBWD6-211ENST00000611553 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
CBWD6-211ENST00000611553 EIF5BO60841 1220 aaKnown RBP6.94□□□□□ -1.3
CBWD6-211ENST00000611553 KCNA4P22459 653 aa6.94□□□□□ -1.3
CBWD6-211ENST00000611553 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
CBWD6-211ENST00000611553 TULP1O00294 542 aaPredicted RBP6.86□□□□□ -1.31
CBWD6-211ENST00000611553 CSRNP3Q8WYN3 585 aa6.85□□□□□ -1.31
CBWD6-211ENST00000611553 RNF39Q9H2S5 420 aa6.83□□□□□ -1.32
CBWD6-211ENST00000611553 TAOK2Q9UL54 1235 aa6.82□□□□□ -1.32
CBWD6-211ENST00000611553 KLHL34Q8N239 644 aa6.78□□□□□ -1.32
CBWD6-211ENST00000611553 BCANQ96GW7 911 aa6.76□□□□□ -1.33
CBWD6-211ENST00000611553 C1QBPQ07021 282 aaKnown RBP6.75□□□□□ -1.33
CBWD6-211ENST00000611553 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
CBWD6-211ENST00000611553 HOXD11P31277 338 aaPredicted RBP6.71□□□□□ -1.34
CBWD6-211ENST00000611553 TPRNQ4KMQ1 711 aa6.71□□□□□ -1.34
CBWD6-211ENST00000611553 BCL11AQ9H165 835 aa6.66□□□□□ -1.34
CBWD6-211ENST00000611553 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
CBWD6-211ENST00000611553 PPP4R3CPQ6ZMV5 832 aa6.64□□□□□ -1.35
CBWD6-211ENST00000611553 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
CBWD6-211ENST00000611553 PLEKHG5O94827 1062 aa6.61□□□□□ -1.35
CBWD6-211ENST00000611553 RNF216Q9NWF9 866 aaPredicted RBP6.6□□□□□ -1.35
CBWD6-211ENST00000611553 CNKSR2Q8WXI2 1034 aa6.6□□□□□ -1.35
CBWD6-211ENST00000611553 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
CBWD6-211ENST00000611553 PLCB2Q00722 1185 aa6.56□□□□□ -1.36
CBWD6-211ENST00000611553 POTEHQ6S545 545 aa6.56□□□□□ -1.36
CBWD6-211ENST00000611553 FBXO3Q9UK99 471 aa6.56□□□□□ -1.36
CBWD6-211ENST00000611553 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
CBWD6-211ENST00000611553 DNAJC5BQ9UF47 199 aa6.53□□□□□ -1.36
CBWD6-211ENST00000611553 HAP1P54257 671 aaPredicted RBP6.52□□□□□ -1.37
CBWD6-211ENST00000611553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.51□□□□□ -1.37
CBWD6-211ENST00000611553 HRCP23327 699 aa6.5□□□□□ -1.37
CBWD6-211ENST00000611553 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
CBWD6-211ENST00000611553 SLC4A1APQ9BWU0 796 aaKnown RBP6.48□□□□□ -1.37
CBWD6-211ENST00000611553 DCAF8L2P0C7V8 631 aa6.46□□□□□ -1.37
CBWD6-211ENST00000611553 PDIA4P13667 645 aaKnown RBP6.42□□□□□ -1.38
CBWD6-211ENST00000611553 TRIM26Q12899 539 aaPredicted RBP6.4□□□□□ -1.38
CBWD6-211ENST00000611553 VSIG10Q8N0Z9 540 aa6.37□□□□□ -1.39
CBWD6-211ENST00000611553 LOC105371045A0A1W2PR82 267 aa6.36□□□□□ -1.39
CBWD6-211ENST00000611553 UBE2Q2Q8WVN8 375 aa6.36□□□□□ -1.39
CBWD6-211ENST00000611553 CAPN15O75808 1086 aa6.34□□□□□ -1.39
CBWD6-211ENST00000611553 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
CBWD6-211ENST00000611553 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
CBWD6-211ENST00000611553 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
CBWD6-211ENST00000611553 CDK11BP21127 795 aaKnown RBP6.3□□□□□ -1.4
CBWD6-211ENST00000611553 NEFLP07196 543 aa6.3□□□□□ -1.4
CBWD6-211ENST00000611553 PDE4CQ08493 712 aa6.3□□□□□ -1.4
CBWD6-211ENST00000611553 DSG3P32926 999 aa6.29□□□□□ -1.4
CBWD6-211ENST00000611553 CENPBP07199 599 aaPredicted RBP6.29□□□□□ -1.4
CBWD6-211ENST00000611553 UBTFP17480 764 aaKnown RBP6.28□□□□□ -1.4
CBWD6-211ENST00000611553 BRD2P25440 801 aaKnown RBP6.27□□□□□ -1.41
CBWD6-211ENST00000611553 SPINK5Q9NQ38 1064 aaPredicted RBP6.26□□□□□ -1.41
CBWD6-211ENST00000611553 TAF7LQ5H9L4 462 aa6.25□□□□□ -1.41
CBWD6-211ENST00000611553 SAMD1Q6SPF0 538 aaPredicted RBP6.24□□□□□ -1.41
CBWD6-211ENST00000611553 HMGB1P09429 215 aaKnown RBP6.24□□□□□ -1.41
CBWD6-211ENST00000611553 U3KPZ7 1027 aaPredicted RBP6.24□□□□□ -1.41
CBWD6-211ENST00000611553 KDM2AQ9Y2K7 1162 aa6.23□□□□□ -1.41
CBWD6-211ENST00000611553 SHROOM4Q9ULL8 1493 aa6.22□□□□□ -1.41
CBWD6-211ENST00000611553 PKNOX2Q96KN3 472 aa6.22□□□□□ -1.41
CBWD6-211ENST00000611553 HSP90B1P14625 803 aaKnown RBP6.19□□□□□ -1.42
CBWD6-211ENST00000611553 ANP32EQ9BTT0 268 aa6.19□□□□□ -1.42
CBWD6-211ENST00000611553 DHX37Q8IY37 1157 aaKnown RBP6.19□□□□□ -1.42
CBWD6-211ENST00000611553 NPM3O75607 178 aaKnown RBP6.18□□□□□ -1.42
CBWD6-211ENST00000611553 TRHP20396 242 aaPredicted RBP6.16□□□□□ -1.42
CBWD6-211ENST00000611553 FBLN2P98095 1184 aa6.15□□□□□ -1.42
CBWD6-211ENST00000611553 FKBP8Q14318 412 aa6.15□□□□□ -1.42
CBWD6-211ENST00000611553 ZBTB22O15209 634 aa6.15□□□□□ -1.42
CBWD6-211ENST00000611553 ABCB7O75027 752 aa6.14□□□□□ -1.43
CBWD6-211ENST00000611553 CCDC9Q9Y3X0 531 aaKnown RBP6.13□□□□□ -1.43
CBWD6-211ENST00000611553 IGSF3O75054 1194 aa6.12□□□□□ -1.43
CBWD6-211ENST00000611553 ZNF219Q9P2Y4 722 aaPredicted RBP6.12□□□□□ -1.43
CBWD6-211ENST00000611553 ACIN1Q9UKV3 1341 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms