RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 NOL7Q9UMY1 257 aaKnown RBP21.58■■□□□ 1.05
CDK11B-205ENST00000611150 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.04
CDK11B-205ENST00000611150 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.04
CDK11B-205ENST00000611150 CC2D1BQ5T0F9 858 aaKnown RBP21.57■■□□□ 1.04
CDK11B-205ENST00000611150 ATP2B3Q16720 1220 aa21.56■■□□□ 1.04
CDK11B-205ENST00000611150 FBXO3Q9UK99 471 aa21.56■■□□□ 1.04
CDK11B-205ENST00000611150 XPCQ01831 940 aaPredicted RBP21.55■■□□□ 1.04
CDK11B-205ENST00000611150 TIGD1Q96MW7 591 aa21.55■■□□□ 1.04
CDK11B-205ENST00000611150 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
CDK11B-205ENST00000611150 P3H3Q8IVL6 736 aa21.54■■□□□ 1.04
CDK11B-205ENST00000611150 KDM2BQ8NHM5 1336 aa21.54■■□□□ 1.04
CDK11B-205ENST00000611150 KANK4Q5T7N3 995 aaPredicted RBP21.54■■□□□ 1.04
CDK11B-205ENST00000611150 NASPP49321 788 aaPredicted RBP21.53■■□□□ 1.04
CDK11B-205ENST00000611150 GAS2L3Q86XJ1 694 aa21.52■■□□□ 1.04
CDK11B-205ENST00000611150 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
CDK11B-205ENST00000611150 MCM5P33992 734 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 KIF3AQ9Y496 699 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 TRIM6-TRIM34B2RNG4 842 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 MYRIPQ8NFW9 859 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 TRIM34Q9BYJ4 488 aa21.51■■□□□ 1.03
CDK11B-205ENST00000611150 USP19O94966 1318 aa21.5■■□□□ 1.03
CDK11B-205ENST00000611150 CHMP5Q9NZZ3 219 aa21.49■■□□□ 1.03
CDK11B-205ENST00000611150 CHMP4CQ96CF2 233 aa21.47■■□□□ 1.03
CDK11B-205ENST00000611150 TULP2O00295 520 aa21.47■■□□□ 1.03
CDK11B-205ENST00000611150 EFCC1Q9HA90 598 aa21.47■■□□□ 1.03
CDK11B-205ENST00000611150 IGSF3O75054 1194 aa21.46■■□□□ 1.03
CDK11B-205ENST00000611150 ZNF710Q8N1W2 664 aa21.46■■□□□ 1.03
CDK11B-205ENST00000611150 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
CDK11B-205ENST00000611150 PHF14O94880 888 aa21.45■■□□□ 1.02
CDK11B-205ENST00000611150 GABPB1Q06547 395 aaPredicted RBP21.45■■□□□ 1.02
CDK11B-205ENST00000611150 SKOR2Q2VWA4 1001 aaPredicted RBP21.45■■□□□ 1.02
CDK11B-205ENST00000611150 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
CDK11B-205ENST00000611150 IQGAP2Q13576 1575 aa21.45■■□□□ 1.02
CDK11B-205ENST00000611150 NINLQ9Y2I6 1382 aa21.45■■□□□ 1.02
CDK11B-205ENST00000611150 EIF4G2P78344 907 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDK11B-205ENST00000611150 TMED8Q6PL24 325 aaPredicted RBP21.44■■□□□ 1.02
CDK11B-205ENST00000611150 ZKSCAN5Q9Y2L8 839 aa21.44■■□□□ 1.02
CDK11B-205ENST00000611150 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
CDK11B-205ENST00000611150 SPDYE4A6NLX3 237 aa21.43■■□□□ 1.02
CDK11B-205ENST00000611150 PANK3Q9H999 370 aa21.43■■□□□ 1.02
CDK11B-205ENST00000611150 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
CDK11B-205ENST00000611150 MYOM3Q5VTT5 1437 aa21.42■■□□□ 1.02
CDK11B-205ENST00000611150 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
CDK11B-205ENST00000611150 PRIMPOLQ96LW4 560 aa21.42■■□□□ 1.02
CDK11B-205ENST00000611150 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
CDK11B-205ENST00000611150 GTF2F1P35269 517 aaKnown RBP eCLIP21.41■■□□□ 1.02
CDK11B-205ENST00000611150 ZBTB9Q96C00 473 aa21.41■■□□□ 1.02
CDK11B-205ENST00000611150 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.41■■□□□ 1.02
CDK11B-205ENST00000611150 CALCOCO1Q9P1Z2 691 aa21.41■■□□□ 1.02
CDK11B-205ENST00000611150 MCCP23508 829 aa21.4■■□□□ 1.02
CDK11B-205ENST00000611150 TICAM2Q86XR7 235 aa21.4■■□□□ 1.02
CDK11B-205ENST00000611150 TBC1D2Q9BYX2 928 aa21.4■■□□□ 1.02
CDK11B-205ENST00000611150 CAPN2P17655 700 aa21.4■■□□□ 1.02
CDK11B-205ENST00000611150 FEZ1Q99689 392 aa21.39■■□□□ 1.02
CDK11B-205ENST00000611150 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.01
CDK11B-205ENST00000611150 PDCL2Q8N4E4 241 aa21.39■■□□□ 1.01
CDK11B-205ENST00000611150 PDE3BQ13370 1112 aa21.38■■□□□ 1.01
CDK11B-205ENST00000611150 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.38■■□□□ 1.01
CDK11B-205ENST00000611150 NCOA1Q15788 1441 aa21.37■■□□□ 1.01
CDK11B-205ENST00000611150 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
CDK11B-205ENST00000611150 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
CDK11B-205ENST00000611150 LOC102724159A0A0B4J2E5 919 aa21.37■■□□□ 1.01
CDK11B-205ENST00000611150 RBM25P49756 843 aaKnown RBP21.37■■□□□ 1.01
CDK11B-205ENST00000611150 PWP2Q15269 919 aaKnown RBP21.37■■□□□ 1.01
CDK11B-205ENST00000611150 CCDC9Q9Y3X0 531 aaKnown RBP21.37■■□□□ 1.01
CDK11B-205ENST00000611150 LMOD3Q0VAK6 560 aa21.36■■□□□ 1.01
CDK11B-205ENST00000611150 UPF2Q9HAU5 1272 aaKnown RBP21.36■■□□□ 1.01
CDK11B-205ENST00000611150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.34■■□□□ 1.01
CDK11B-205ENST00000611150 TNNT3P45378 269 aaPredicted RBP21.34■■□□□ 1.01
CDK11B-205ENST00000611150 CEP120Q8N960 986 aa21.34■■□□□ 1.01
CDK11B-205ENST00000611150 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
CDK11B-205ENST00000611150 PTPRGP23470 1445 aa21.34■■□□□ 1.01
CDK11B-205ENST00000611150 BANK1Q8NDB2 785 aa21.33■■□□□ 1.01
CDK11B-205ENST00000611150 OGFRQ9NZT2 677 aa21.33■■□□□ 1.01
CDK11B-205ENST00000611150 PRR29P0C7W0 189 aa21.33■■□□□ 1
CDK11B-205ENST00000611150 UGGT2Q9NYU1 1516 aa21.33■■□□□ 1
CDK11B-205ENST00000611150 PLIN1O60240 522 aa21.32■■□□□ 1
CDK11B-205ENST00000611150 CTTNBP2Q8WZ74 1663 aa21.32■■□□□ 1
CDK11B-205ENST00000611150 ADCY10Q96PN6 1610 aa21.32■■□□□ 1
CDK11B-205ENST00000611150 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
CDK11B-205ENST00000611150 NPM1P06748 294 aaKnown RBP eCLIP21.31■■□□□ 1
CDK11B-205ENST00000611150 DISP1Q96F81 1524 aa21.31■■□□□ 1
CDK11B-205ENST00000611150 EGFL6Q8IUX8 553 aa21.31■■□□□ 1
CDK11B-205ENST00000611150 PDLIM2Q96JY6 352 aa21.31■■□□□ 1
CDK11B-205ENST00000611150 IBTKQ9P2D0 1353 aaPredicted RBP21.31■■□□□ 1
CDK11B-205ENST00000611150 FAM43BQ6ZT52 329 aaPredicted RBP21.3■■□□□ 1
CDK11B-205ENST00000611150 SLFN14P0C7P3 912 aa21.29■■□□□ 1
CDK11B-205ENST00000611150 SPRYD3Q8NCJ5 442 aa21.29■■□□□ 1
CDK11B-205ENST00000611150 GBP4Q96PP9 640 aa21.29■■□□□ 1
CDK11B-205ENST00000611150 MYCBPQ99417 103 aaPredicted RBP21.29■■□□□ 1
CDK11B-205ENST00000611150 CCDC39Q9UFE4 941 aa21.29■■□□□ 1
CDK11B-205ENST00000611150 PLCD4Q9BRC7 762 aa21.29■■□□□ 1
CDK11B-205ENST00000611150 MFAP1P55081 439 aaKnown RBP21.28■■□□□ 1
CDK11B-205ENST00000611150 NLRP1Q9C000 1473 aa21.27■■□□□ 1
CDK11B-205ENST00000611150 U2AF2P26368 475 aaKnown RBP eCLIP21.27■■□□□ 1
CDK11B-205ENST00000611150 TSC1Q92574 1164 aa21.27■■□□□ 1
CDK11B-205ENST00000611150 SEC24BO95487 1268 aa21.26■□□□□ 0.99
CDK11B-205ENST00000611150 FEZ2Q9UHY8 353 aaPredicted RBP21.26■□□□□ 0.99
CDK11B-205ENST00000611150 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms