RNA–Protein interactions for RNA: ENST00000607357.1

COPS9-205, Transcript of COP9 signalosome subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS9, Length 418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-205ENST00000607357 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
COPS9-205ENST00000607357 PLEKHG1Q9ULL1 1385 aa22.62■■□□□ 1.21
COPS9-205ENST00000607357 SLC26A8Q96RN1 970 aa22.61■■□□□ 1.21
COPS9-205ENST00000607357 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
COPS9-205ENST00000607357 NWD1Q149M9 1564 aa22.6■■□□□ 1.21
COPS9-205ENST00000607357 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
COPS9-205ENST00000607357 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
COPS9-205ENST00000607357 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
COPS9-205ENST00000607357 TRPM2O94759 1503 aa22.57■■□□□ 1.2
COPS9-205ENST00000607357 BCANQ96GW7 911 aa22.57■■□□□ 1.2
COPS9-205ENST00000607357 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
COPS9-205ENST00000607357 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.56■■□□□ 1.2
COPS9-205ENST00000607357 CLTCL1P53675 1640 aa22.56■■□□□ 1.2
COPS9-205ENST00000607357 KCNA6P17658 529 aa22.55■■□□□ 1.2
COPS9-205ENST00000607357 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
COPS9-205ENST00000607357 DIP2AQ14689 1571 aa22.54■■□□□ 1.2
COPS9-205ENST00000607357 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
COPS9-205ENST00000607357 TMEM94Q12767 1356 aa22.52■■□□□ 1.2
COPS9-205ENST00000607357 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
COPS9-205ENST00000607357 ADAMTS13Q76LX8 1427 aa22.51■■□□□ 1.19
COPS9-205ENST00000607357 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
COPS9-205ENST00000607357 HSPA1LP34931 641 aa22.5■■□□□ 1.19
COPS9-205ENST00000607357 KIF1BO60333 1816 aa22.5■■□□□ 1.19
COPS9-205ENST00000607357 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
COPS9-205ENST00000607357 PROSER2Q86WR7 435 aaPredicted RBP22.48■■□□□ 1.19
COPS9-205ENST00000607357 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
COPS9-205ENST00000607357 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
COPS9-205ENST00000607357 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
COPS9-205ENST00000607357 ZNF326Q5BKZ1 582 aaKnown RBP22.45■■□□□ 1.18
COPS9-205ENST00000607357 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
COPS9-205ENST00000607357 SETBP1Q9Y6X0 1596 aa22.45■■□□□ 1.18
COPS9-205ENST00000607357 PIK3R4Q99570 1358 aa22.43■■□□□ 1.18
COPS9-205ENST00000607357 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
COPS9-205ENST00000607357 MSH6P52701 1360 aa22.39■■□□□ 1.18
COPS9-205ENST00000607357 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
COPS9-205ENST00000607357 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
COPS9-205ENST00000607357 PTPRUQ92729 1446 aa22.37■■□□□ 1.17
COPS9-205ENST00000607357 MED1Q15648 1581 aaPredicted RBP22.37■■□□□ 1.17
COPS9-205ENST00000607357 ROBO1Q9Y6N7 1651 aa22.36■■□□□ 1.17
COPS9-205ENST00000607357 NCOA3Q9Y6Q9 1424 aa22.36■■□□□ 1.17
COPS9-205ENST00000607357 SETD5Q9C0A6 1442 aa22.35■■□□□ 1.17
COPS9-205ENST00000607357 FOXD1Q16676 465 aa22.34■■□□□ 1.17
COPS9-205ENST00000607357 PPLO60437 1756 aa22.34■■□□□ 1.17
COPS9-205ENST00000607357 AMOTL2Q9Y2J4 779 aa22.32■■□□□ 1.16
COPS9-205ENST00000607357 METP08581 1390 aa22.31■■□□□ 1.16
COPS9-205ENST00000607357 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
COPS9-205ENST00000607357 SETD1AO15047 1707 aaKnown RBP22.31■■□□□ 1.16
COPS9-205ENST00000607357 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
COPS9-205ENST00000607357 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
COPS9-205ENST00000607357 ACIN1Q9UKV3 1341 aaKnown RBP22.3■■□□□ 1.16
COPS9-205ENST00000607357 ILDR2Q71H61 639 aa22.29■■□□□ 1.16
COPS9-205ENST00000607357 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
COPS9-205ENST00000607357 RPGRIP1LQ68CZ1 1315 aa22.29■■□□□ 1.16
COPS9-205ENST00000607357 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.16
COPS9-205ENST00000607357 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
COPS9-205ENST00000607357 SLAIN2Q9P270 581 aa22.26■■□□□ 1.15
COPS9-205ENST00000607357 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
COPS9-205ENST00000607357 IFT172Q9UG01 1749 aa22.25■■□□□ 1.15
COPS9-205ENST00000607357 C19orf44Q9H6X5 657 aa22.24■■□□□ 1.15
COPS9-205ENST00000607357 PHLPP1O60346 1717 aa22.23■■□□□ 1.15
COPS9-205ENST00000607357 DCCP43146 1447 aa22.23■■□□□ 1.15
COPS9-205ENST00000607357 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
COPS9-205ENST00000607357 ATF3P18847 181 aa22.21■■□□□ 1.15
COPS9-205ENST00000607357 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
COPS9-205ENST00000607357 PTCH1Q13635 1447 aa22.2■■□□□ 1.14
COPS9-205ENST00000607357 ADGRL3Q9HAR2 1447 aa22.19■■□□□ 1.14
COPS9-205ENST00000607357 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
COPS9-205ENST00000607357 PRAG1Q86YV5 1406 aa22.17■■□□□ 1.14
COPS9-205ENST00000607357 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
COPS9-205ENST00000607357 RGL3Q3MIN7 710 aa22.17■■□□□ 1.14
COPS9-205ENST00000607357 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
COPS9-205ENST00000607357 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
COPS9-205ENST00000607357 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
COPS9-205ENST00000607357 MST1RQ04912 1400 aa22.14■■□□□ 1.13
COPS9-205ENST00000607357 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
COPS9-205ENST00000607357 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
COPS9-205ENST00000607357 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
COPS9-205ENST00000607357 SOCS7O14512 581 aa22.1■■□□□ 1.13
COPS9-205ENST00000607357 BRINP3Q76B58 766 aa22.1■■□□□ 1.13
COPS9-205ENST00000607357 JCADQ9P266 1359 aa22.1■■□□□ 1.13
COPS9-205ENST00000607357 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
COPS9-205ENST00000607357 MYOM2P54296 1465 aa22.08■■□□□ 1.12
COPS9-205ENST00000607357 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
COPS9-205ENST00000607357 HRCP23327 699 aa22.07■■□□□ 1.12
COPS9-205ENST00000607357 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
COPS9-205ENST00000607357 SHPRHQ149N8 1683 aa22.06■■□□□ 1.12
COPS9-205ENST00000607357 TECPR2O15040 1411 aa22.06■■□□□ 1.12
COPS9-205ENST00000607357 LAMC1P11047 1609 aa22.05■■□□□ 1.12
COPS9-205ENST00000607357 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
COPS9-205ENST00000607357 C1orf167Q5SNV9 1468 aa22.03■■□□□ 1.12
COPS9-205ENST00000607357 CDC42BPGQ6DT37 1551 aa22.03■■□□□ 1.12
COPS9-205ENST00000607357 ABCC11Q96J66 1382 aa22■■□□□ 1.11
COPS9-205ENST00000607357 YTHDC2Q9H6S0 1430 aaKnown RBP22■■□□□ 1.11
COPS9-205ENST00000607357 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
COPS9-205ENST00000607357 STK26Q9P289 416 aa22■■□□□ 1.11
COPS9-205ENST00000607357 RGS17Q9UGC6 210 aaPredicted RBP22■■□□□ 1.11
COPS9-205ENST00000607357 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
COPS9-205ENST00000607357 LRP6O75581 1613 aa21.98■■□□□ 1.11
COPS9-205ENST00000607357 C14orf93Q9H972 538 aaKnown RBP21.97■■□□□ 1.11
COPS9-205ENST00000607357 PLEKHH1Q9ULM0 1364 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms