RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
TUBE1-208ENST00000604743 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
TUBE1-208ENST00000604743 CPS1P31327 1500 aa21.49■■□□□ 1.03
TUBE1-208ENST00000604743 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
TUBE1-208ENST00000604743 FOXD1Q16676 465 aa21.48■■□□□ 1.03
TUBE1-208ENST00000604743 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
TUBE1-208ENST00000604743 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
TUBE1-208ENST00000604743 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
TUBE1-208ENST00000604743 KIF1BO60333 1816 aa21.47■■□□□ 1.03
TUBE1-208ENST00000604743 TRPM2O94759 1503 aa21.46■■□□□ 1.03
TUBE1-208ENST00000604743 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.45■■□□□ 1.02
TUBE1-208ENST00000604743 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
TUBE1-208ENST00000604743 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
TUBE1-208ENST00000604743 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
TUBE1-208ENST00000604743 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
TUBE1-208ENST00000604743 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
TUBE1-208ENST00000604743 ACIN1Q9UKV3 1341 aaKnown RBP21.37■■□□□ 1.01
TUBE1-208ENST00000604743 KCNA6P17658 529 aa21.36■■□□□ 1.01
TUBE1-208ENST00000604743 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
TUBE1-208ENST00000604743 CHD2O14647 1828 aaKnown RBP21.34■■□□□ 1.01
TUBE1-208ENST00000604743 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
TUBE1-208ENST00000604743 TOM1O60784 492 aa21.33■■□□□ 1.01
TUBE1-208ENST00000604743 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
TUBE1-208ENST00000604743 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
TUBE1-208ENST00000604743 TBX22Q9Y458 520 aa21.33■■□□□ 1.01
TUBE1-208ENST00000604743 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
TUBE1-208ENST00000604743 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
TUBE1-208ENST00000604743 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
TUBE1-208ENST00000604743 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
TUBE1-208ENST00000604743 NWD1Q149M9 1564 aa21.29■■□□□ 1
TUBE1-208ENST00000604743 RGL3Q3MIN7 710 aa21.29■■□□□ 1
TUBE1-208ENST00000604743 DIP2AQ14689 1571 aa21.28■■□□□ 1
TUBE1-208ENST00000604743 TMEM94Q12767 1356 aa21.28■■□□□ 1
TUBE1-208ENST00000604743 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
TUBE1-208ENST00000604743 PPLO60437 1756 aa21.26■□□□□ 0.99
TUBE1-208ENST00000604743 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
TUBE1-208ENST00000604743 SETBP1Q9Y6X0 1596 aa21.25■□□□□ 0.99
TUBE1-208ENST00000604743 NKTRP30414 1462 aaKnown RBP21.25■□□□□ 0.99
TUBE1-208ENST00000604743 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
TUBE1-208ENST00000604743 HRCP23327 699 aa21.24■□□□□ 0.99
TUBE1-208ENST00000604743 ALKQ9UM73 1620 aa21.23■□□□□ 0.99
TUBE1-208ENST00000604743 AMOTL2Q9Y2J4 779 aa21.23■□□□□ 0.99
TUBE1-208ENST00000604743 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
TUBE1-208ENST00000604743 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
TUBE1-208ENST00000604743 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
TUBE1-208ENST00000604743 METP08581 1390 aa21.2■□□□□ 0.98
TUBE1-208ENST00000604743 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
TUBE1-208ENST00000604743 IFT172Q9UG01 1749 aa21.18■□□□□ 0.98
TUBE1-208ENST00000604743 MSH6P52701 1360 aa21.17■□□□□ 0.98
TUBE1-208ENST00000604743 ANKRD30BQ9BXX2 1392 aa21.16■□□□□ 0.98
TUBE1-208ENST00000604743 ADGRF5Q8IZF2 1346 aa21.16■□□□□ 0.98
TUBE1-208ENST00000604743 HSPA1LP34931 641 aa21.16■□□□□ 0.98
TUBE1-208ENST00000604743 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
TUBE1-208ENST00000604743 XRN1Q8IZH2 1706 aaKnown RBP21.15■□□□□ 0.98
TUBE1-208ENST00000604743 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
TUBE1-208ENST00000604743 NCOA3Q9Y6Q9 1424 aa21.09■□□□□ 0.97
TUBE1-208ENST00000604743 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
TUBE1-208ENST00000604743 ATF3P18847 181 aa21.07■□□□□ 0.96
TUBE1-208ENST00000604743 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
TUBE1-208ENST00000604743 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
TUBE1-208ENST00000604743 STK26Q9P289 416 aa21.05■□□□□ 0.96
TUBE1-208ENST00000604743 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
TUBE1-208ENST00000604743 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
TUBE1-208ENST00000604743 FAM135BQ49AJ0 1406 aa21.04■□□□□ 0.96
TUBE1-208ENST00000604743 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
TUBE1-208ENST00000604743 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
TUBE1-208ENST00000604743 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
TUBE1-208ENST00000604743 ROBO2Q9HCK4 1378 aa21.02■□□□□ 0.96
TUBE1-208ENST00000604743 DCAF11Q8TEB1 546 aa21.02■□□□□ 0.96
TUBE1-208ENST00000604743 MYOM2P54296 1465 aa21.01■□□□□ 0.95
TUBE1-208ENST00000604743 NALCNQ8IZF0 1738 aa21.01■□□□□ 0.95
TUBE1-208ENST00000604743 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
TUBE1-208ENST00000604743 PTCH1Q13635 1447 aa21■□□□□ 0.95
TUBE1-208ENST00000604743 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
TUBE1-208ENST00000604743 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
TUBE1-208ENST00000604743 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
TUBE1-208ENST00000604743 ADGRL3Q9HAR2 1447 aa20.98■□□□□ 0.95
TUBE1-208ENST00000604743 NRXN1Q9ULB1 1477 aa20.98■□□□□ 0.95
TUBE1-208ENST00000604743 PHLPP1O60346 1717 aa20.96■□□□□ 0.95
TUBE1-208ENST00000604743 LAMC1P11047 1609 aa20.96■□□□□ 0.95
TUBE1-208ENST00000604743 LRPPRCP42704 1394 aaKnown RBP20.96■□□□□ 0.95
TUBE1-208ENST00000604743 DCCP43146 1447 aa20.95■□□□□ 0.95
TUBE1-208ENST00000604743 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
TUBE1-208ENST00000604743 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
TUBE1-208ENST00000604743 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
TUBE1-208ENST00000604743 KNDC1Q76NI1 1749 aa20.94■□□□□ 0.94
TUBE1-208ENST00000604743 MST1RQ04912 1400 aa20.93■□□□□ 0.94
TUBE1-208ENST00000604743 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
TUBE1-208ENST00000604743 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
TUBE1-208ENST00000604743 BRINP3Q76B58 766 aa20.91■□□□□ 0.94
TUBE1-208ENST00000604743 SIN3AQ96ST3 1273 aa20.91■□□□□ 0.94
TUBE1-208ENST00000604743 TECPR2O15040 1411 aa20.9■□□□□ 0.94
TUBE1-208ENST00000604743 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
TUBE1-208ENST00000604743 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
TUBE1-208ENST00000604743 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.94
TUBE1-208ENST00000604743 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
TUBE1-208ENST00000604743 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
TUBE1-208ENST00000604743 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
TUBE1-208ENST00000604743 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
TUBE1-208ENST00000604743 NUTM2FA1L443 756 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms