RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 TRPM2O94759 1503 aa23.64■■□□□ 1.38
PPFIA4-213ENST00000601609 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.37
PPFIA4-213ENST00000601609 SETD5Q9C0A6 1442 aa23.64■■□□□ 1.37
PPFIA4-213ENST00000601609 ZFYVE9O95405 1425 aa23.63■■□□□ 1.37
PPFIA4-213ENST00000601609 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
PPFIA4-213ENST00000601609 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
PPFIA4-213ENST00000601609 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
PPFIA4-213ENST00000601609 SLC26A8Q96RN1 970 aa23.62■■□□□ 1.37
PPFIA4-213ENST00000601609 UBAP1LF5GYI3 381 aa23.6■■□□□ 1.37
PPFIA4-213ENST00000601609 PLEKHG1Q9ULL1 1385 aa23.59■■□□□ 1.37
PPFIA4-213ENST00000601609 STRCP1A6NGW2 1772 aa23.59■■□□□ 1.37
PPFIA4-213ENST00000601609 FOXD1Q16676 465 aa23.58■■□□□ 1.37
PPFIA4-213ENST00000601609 KIF1BO60333 1816 aa23.58■■□□□ 1.37
PPFIA4-213ENST00000601609 RAB3GAP2Q9H2M9 1393 aa23.57■■□□□ 1.36
PPFIA4-213ENST00000601609 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
PPFIA4-213ENST00000601609 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
PPFIA4-213ENST00000601609 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
PPFIA4-213ENST00000601609 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
PPFIA4-213ENST00000601609 KCNA6P17658 529 aa23.5■■□□□ 1.35
PPFIA4-213ENST00000601609 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
PPFIA4-213ENST00000601609 TOM1O60784 492 aa23.49■■□□□ 1.35
PPFIA4-213ENST00000601609 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
PPFIA4-213ENST00000601609 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
PPFIA4-213ENST00000601609 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
PPFIA4-213ENST00000601609 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
PPFIA4-213ENST00000601609 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
PPFIA4-213ENST00000601609 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
PPFIA4-213ENST00000601609 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
PPFIA4-213ENST00000601609 NKTRP30414 1462 aaKnown RBP23.44■■□□□ 1.34
PPFIA4-213ENST00000601609 TMEM94Q12767 1356 aa23.42■■□□□ 1.34
PPFIA4-213ENST00000601609 SETBP1Q9Y6X0 1596 aa23.41■■□□□ 1.34
PPFIA4-213ENST00000601609 CHD2O14647 1828 aaKnown RBP23.41■■□□□ 1.34
PPFIA4-213ENST00000601609 RBM33Q96EV2 1170 aaKnown RBP23.41■■□□□ 1.34
PPFIA4-213ENST00000601609 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
PPFIA4-213ENST00000601609 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
PPFIA4-213ENST00000601609 NRXN3Q9Y4C0 1643 aa23.39■■□□□ 1.33
PPFIA4-213ENST00000601609 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
PPFIA4-213ENST00000601609 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
PPFIA4-213ENST00000601609 PIK3R4Q99570 1358 aa23.38■■□□□ 1.33
PPFIA4-213ENST00000601609 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
PPFIA4-213ENST00000601609 PPLO60437 1756 aa23.37■■□□□ 1.33
PPFIA4-213ENST00000601609 AMOTL2Q9Y2J4 779 aa23.34■■□□□ 1.33
PPFIA4-213ENST00000601609 MSH6P52701 1360 aa23.34■■□□□ 1.33
PPFIA4-213ENST00000601609 HRCP23327 699 aa23.33■■□□□ 1.33
PPFIA4-213ENST00000601609 ALKQ9UM73 1620 aa23.33■■□□□ 1.32
PPFIA4-213ENST00000601609 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
PPFIA4-213ENST00000601609 PTPRUQ92729 1446 aa23.31■■□□□ 1.32
PPFIA4-213ENST00000601609 METP08581 1390 aa23.3■■□□□ 1.32
PPFIA4-213ENST00000601609 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
PPFIA4-213ENST00000601609 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
PPFIA4-213ENST00000601609 HSPA1LP34931 641 aa23.27■■□□□ 1.32
PPFIA4-213ENST00000601609 IFT172Q9UG01 1749 aa23.27■■□□□ 1.32
PPFIA4-213ENST00000601609 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
PPFIA4-213ENST00000601609 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
PPFIA4-213ENST00000601609 SETD1AO15047 1707 aaKnown RBP23.23■■□□□ 1.31
PPFIA4-213ENST00000601609 ATF3P18847 181 aa23.21■■□□□ 1.31
PPFIA4-213ENST00000601609 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
PPFIA4-213ENST00000601609 ROBO1Q9Y6N7 1651 aa23.19■■□□□ 1.3
PPFIA4-213ENST00000601609 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
PPFIA4-213ENST00000601609 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
PPFIA4-213ENST00000601609 PIK3C2GO75747 1445 aa23.16■■□□□ 1.3
PPFIA4-213ENST00000601609 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
PPFIA4-213ENST00000601609 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
PPFIA4-213ENST00000601609 MYOM2P54296 1465 aa23.16■■□□□ 1.3
PPFIA4-213ENST00000601609 PTCH1Q13635 1447 aa23.15■■□□□ 1.3
PPFIA4-213ENST00000601609 STK26Q9P289 416 aa23.14■■□□□ 1.29
PPFIA4-213ENST00000601609 DISP3Q9P2K9 1392 aa23.14■■□□□ 1.29
PPFIA4-213ENST00000601609 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
PPFIA4-213ENST00000601609 ADGRL3Q9HAR2 1447 aa23.13■■□□□ 1.29
PPFIA4-213ENST00000601609 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
PPFIA4-213ENST00000601609 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
PPFIA4-213ENST00000601609 DCCP43146 1447 aa23.11■■□□□ 1.29
PPFIA4-213ENST00000601609 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
PPFIA4-213ENST00000601609 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
PPFIA4-213ENST00000601609 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
PPFIA4-213ENST00000601609 LAMC1P11047 1609 aa23.11■■□□□ 1.29
PPFIA4-213ENST00000601609 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
PPFIA4-213ENST00000601609 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
PPFIA4-213ENST00000601609 LRPPRCP42704 1394 aaKnown RBP23.07■■□□□ 1.28
PPFIA4-213ENST00000601609 CFAP70Q5T0N1 1121 aa23.07■■□□□ 1.28
PPFIA4-213ENST00000601609 PRAG1Q86YV5 1406 aa23.07■■□□□ 1.28
PPFIA4-213ENST00000601609 PHLPP1O60346 1717 aa23.06■■□□□ 1.28
PPFIA4-213ENST00000601609 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
PPFIA4-213ENST00000601609 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
PPFIA4-213ENST00000601609 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
PPFIA4-213ENST00000601609 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
PPFIA4-213ENST00000601609 MED1Q15648 1581 aaPredicted RBP23.03■■□□□ 1.28
PPFIA4-213ENST00000601609 MST1RQ04912 1400 aa23.03■■□□□ 1.28
PPFIA4-213ENST00000601609 TECPR2O15040 1411 aa23.02■■□□□ 1.28
PPFIA4-213ENST00000601609 ABCC11Q96J66 1382 aa23.01■■□□□ 1.27
PPFIA4-213ENST00000601609 BRINP3Q76B58 766 aa23■■□□□ 1.27
PPFIA4-213ENST00000601609 WAPLQ7Z5K2 1190 aa23■■□□□ 1.27
PPFIA4-213ENST00000601609 STAC3Q96MF2 364 aa23■■□□□ 1.27
PPFIA4-213ENST00000601609 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
PPFIA4-213ENST00000601609 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
PPFIA4-213ENST00000601609 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
PPFIA4-213ENST00000601609 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
PPFIA4-213ENST00000601609 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
PPFIA4-213ENST00000601609 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
PPFIA4-213ENST00000601609 COL16A1Q07092 1604 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms