RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
LINC01872-203ENST00000600813 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
LINC01872-203ENST00000600813 IQGAP1P46940 1657 aa20.61■□□□□ 0.89
LINC01872-203ENST00000600813 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
LINC01872-203ENST00000600813 ZNF326Q5BKZ1 582 aaKnown RBP20.58■□□□□ 0.89
LINC01872-203ENST00000600813 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
LINC01872-203ENST00000600813 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.56■□□□□ 0.88
LINC01872-203ENST00000600813 PPP1R15AO75807 674 aaPredicted RBP20.55■□□□□ 0.88
LINC01872-203ENST00000600813 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
LINC01872-203ENST00000600813 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
LINC01872-203ENST00000600813 BCANQ96GW7 911 aa20.54■□□□□ 0.88
LINC01872-203ENST00000600813 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
LINC01872-203ENST00000600813 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
LINC01872-203ENST00000600813 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
LINC01872-203ENST00000600813 STRCP1A6NGW2 1772 aa20.52■□□□□ 0.88
LINC01872-203ENST00000600813 RGL3Q3MIN7 710 aa20.51■□□□□ 0.87
LINC01872-203ENST00000600813 ADAMTS13Q76LX8 1427 aa20.51■□□□□ 0.87
LINC01872-203ENST00000600813 KIF1BO60333 1816 aa20.5■□□□□ 0.87
LINC01872-203ENST00000600813 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
LINC01872-203ENST00000600813 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
LINC01872-203ENST00000600813 TBX22Q9Y458 520 aa20.49■□□□□ 0.87
LINC01872-203ENST00000600813 FBXO41Q8TF61 875 aa20.48■□□□□ 0.87
LINC01872-203ENST00000600813 KCNA6P17658 529 aa20.46■□□□□ 0.87
LINC01872-203ENST00000600813 RPGRIP1LQ68CZ1 1315 aa20.46■□□□□ 0.87
LINC01872-203ENST00000600813 RBM33Q96EV2 1170 aaKnown RBP20.45■□□□□ 0.86
LINC01872-203ENST00000600813 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
LINC01872-203ENST00000600813 CPS1P31327 1500 aa20.43■□□□□ 0.86
LINC01872-203ENST00000600813 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
LINC01872-203ENST00000600813 NRXN3Q9Y4C0 1643 aa20.43■□□□□ 0.86
LINC01872-203ENST00000600813 VGFO15240 615 aaPredicted RBP20.43■□□□□ 0.86
LINC01872-203ENST00000600813 METP08581 1390 aa20.41■□□□□ 0.86
LINC01872-203ENST00000600813 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
LINC01872-203ENST00000600813 SETBP1Q9Y6X0 1596 aa20.39■□□□□ 0.85
LINC01872-203ENST00000600813 PPLO60437 1756 aa20.39■□□□□ 0.85
LINC01872-203ENST00000600813 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
LINC01872-203ENST00000600813 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
LINC01872-203ENST00000600813 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
LINC01872-203ENST00000600813 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
LINC01872-203ENST00000600813 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
LINC01872-203ENST00000600813 DHX57Q6P158 1386 aaKnown RBP20.35■□□□□ 0.85
LINC01872-203ENST00000600813 UBAP1LF5GYI3 381 aa20.35■□□□□ 0.85
LINC01872-203ENST00000600813 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
LINC01872-203ENST00000600813 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
LINC01872-203ENST00000600813 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
LINC01872-203ENST00000600813 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
LINC01872-203ENST00000600813 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
LINC01872-203ENST00000600813 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
LINC01872-203ENST00000600813 IFT172Q9UG01 1749 aa20.33■□□□□ 0.84
LINC01872-203ENST00000600813 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
LINC01872-203ENST00000600813 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
LINC01872-203ENST00000600813 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
LINC01872-203ENST00000600813 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
LINC01872-203ENST00000600813 SETD1AO15047 1707 aaKnown RBP20.29■□□□□ 0.84
LINC01872-203ENST00000600813 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
LINC01872-203ENST00000600813 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
LINC01872-203ENST00000600813 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
LINC01872-203ENST00000600813 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
LINC01872-203ENST00000600813 PIP4K2BP78356 416 aa20.27■□□□□ 0.84
LINC01872-203ENST00000600813 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
LINC01872-203ENST00000600813 TOM1O60784 492 aa20.26■□□□□ 0.83
LINC01872-203ENST00000600813 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
LINC01872-203ENST00000600813 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
LINC01872-203ENST00000600813 MYOM2P54296 1465 aa20.24■□□□□ 0.83
LINC01872-203ENST00000600813 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
LINC01872-203ENST00000600813 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
LINC01872-203ENST00000600813 STK26Q9P289 416 aa20.22■□□□□ 0.83
LINC01872-203ENST00000600813 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
LINC01872-203ENST00000600813 C19orf44Q9H6X5 657 aa20.2■□□□□ 0.82
LINC01872-203ENST00000600813 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
LINC01872-203ENST00000600813 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
LINC01872-203ENST00000600813 WAPLQ7Z5K2 1190 aa20.18■□□□□ 0.82
LINC01872-203ENST00000600813 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
LINC01872-203ENST00000600813 MSH6P52701 1360 aa20.18■□□□□ 0.82
LINC01872-203ENST00000600813 STAC3Q96MF2 364 aa20.17■□□□□ 0.82
LINC01872-203ENST00000600813 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
LINC01872-203ENST00000600813 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
LINC01872-203ENST00000600813 HSPA1LP34931 641 aa20.15■□□□□ 0.82
LINC01872-203ENST00000600813 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
LINC01872-203ENST00000600813 PLEKHH1Q9ULM0 1364 aa20.15■□□□□ 0.82
LINC01872-203ENST00000600813 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
LINC01872-203ENST00000600813 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
LINC01872-203ENST00000600813 PTCH1Q13635 1447 aa20.14■□□□□ 0.81
LINC01872-203ENST00000600813 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
LINC01872-203ENST00000600813 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
LINC01872-203ENST00000600813 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
LINC01872-203ENST00000600813 TECPR2O15040 1411 aa20.11■□□□□ 0.81
LINC01872-203ENST00000600813 ATF3P18847 181 aa20.11■□□□□ 0.81
LINC01872-203ENST00000600813 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
LINC01872-203ENST00000600813 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
LINC01872-203ENST00000600813 SIRT1Q96EB6 747 aa20.09■□□□□ 0.81
LINC01872-203ENST00000600813 TRAK1Q9UPV9 953 aa20.09■□□□□ 0.81
LINC01872-203ENST00000600813 ADGRL3Q9HAR2 1447 aa20.09■□□□□ 0.81
LINC01872-203ENST00000600813 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
LINC01872-203ENST00000600813 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
LINC01872-203ENST00000600813 LAMC1P11047 1609 aa20.06■□□□□ 0.8
LINC01872-203ENST00000600813 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
LINC01872-203ENST00000600813 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
LINC01872-203ENST00000600813 MST1RQ04912 1400 aa20.05■□□□□ 0.8
LINC01872-203ENST00000600813 DCCP43146 1447 aa20.04■□□□□ 0.8
LINC01872-203ENST00000600813 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms