RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
CHMP2A-205ENST00000600006 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
CHMP2A-205ENST00000600006 DIP2AQ14689 1571 aa11.99□□□□□ -0.49
CHMP2A-205ENST00000600006 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
CHMP2A-205ENST00000600006 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CHMP2A-205ENST00000600006 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
CHMP2A-205ENST00000600006 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
CHMP2A-205ENST00000600006 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
CHMP2A-205ENST00000600006 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
CHMP2A-205ENST00000600006 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-205ENST00000600006 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-205ENST00000600006 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP2A-205ENST00000600006 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-205ENST00000600006 SETBP1Q9Y6X0 1596 aa11.95□□□□□ -0.5
CHMP2A-205ENST00000600006 ADAMTS13Q76LX8 1427 aa11.94□□□□□ -0.5
CHMP2A-205ENST00000600006 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-205ENST00000600006 HDGFP51858 240 aaKnown RBP11.94□□□□□ -0.5
CHMP2A-205ENST00000600006 PPLO60437 1756 aa11.93□□□□□ -0.5
CHMP2A-205ENST00000600006 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
CHMP2A-205ENST00000600006 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
CHMP2A-205ENST00000600006 IFT172Q9UG01 1749 aa11.92□□□□□ -0.5
CHMP2A-205ENST00000600006 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
CHMP2A-205ENST00000600006 UBAP1LF5GYI3 381 aa11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 KCNA6P17658 529 aa11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 MPHOSPH9Q99550 1183 aa11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 SETD1AO15047 1707 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
CHMP2A-205ENST00000600006 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
CHMP2A-205ENST00000600006 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
CHMP2A-205ENST00000600006 TBX22Q9Y458 520 aa11.89□□□□□ -0.51
CHMP2A-205ENST00000600006 TOM1O60784 492 aa11.88□□□□□ -0.51
CHMP2A-205ENST00000600006 FOXD1Q16676 465 aa11.88□□□□□ -0.51
CHMP2A-205ENST00000600006 BCANQ96GW7 911 aa11.88□□□□□ -0.51
CHMP2A-205ENST00000600006 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
CHMP2A-205ENST00000600006 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
CHMP2A-205ENST00000600006 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-205ENST00000600006 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-205ENST00000600006 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CHMP2A-205ENST00000600006 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
CHMP2A-205ENST00000600006 RPGRIP1LQ68CZ1 1315 aa11.85□□□□□ -0.51
CHMP2A-205ENST00000600006 HRCP23327 699 aa11.84□□□□□ -0.51
CHMP2A-205ENST00000600006 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-205ENST00000600006 PRAG1Q86YV5 1406 aa11.83□□□□□ -0.52
CHMP2A-205ENST00000600006 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-205ENST00000600006 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
CHMP2A-205ENST00000600006 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
CHMP2A-205ENST00000600006 METP08581 1390 aa11.81□□□□□ -0.52
CHMP2A-205ENST00000600006 MSH6P52701 1360 aa11.81□□□□□ -0.52
CHMP2A-205ENST00000600006 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-205ENST00000600006 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-205ENST00000600006 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 LAMC1P11047 1609 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 MYOM2P54296 1465 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 ASXL1Q8IXJ9 1541 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
CHMP2A-205ENST00000600006 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 NRXN1Q9ULB1 1477 aa11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
CHMP2A-205ENST00000600006 DCCP43146 1447 aa11.78□□□□□ -0.52
CHMP2A-205ENST00000600006 HSPA1LP34931 641 aa11.78□□□□□ -0.52
CHMP2A-205ENST00000600006 ADGRF5Q8IZF2 1346 aa11.77□□□□□ -0.53
CHMP2A-205ENST00000600006 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
CHMP2A-205ENST00000600006 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
CHMP2A-205ENST00000600006 TECPR2O15040 1411 aa11.75□□□□□ -0.53
CHMP2A-205ENST00000600006 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
CHMP2A-205ENST00000600006 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
CHMP2A-205ENST00000600006 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
CHMP2A-205ENST00000600006 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-205ENST00000600006 AHDC1Q5TGY3 1603 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-205ENST00000600006 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
CHMP2A-205ENST00000600006 ROBO2Q9HCK4 1378 aa11.73□□□□□ -0.53
CHMP2A-205ENST00000600006 CDC42BPGQ6DT37 1551 aa11.72□□□□□ -0.53
CHMP2A-205ENST00000600006 MST1RQ04912 1400 aa11.72□□□□□ -0.53
CHMP2A-205ENST00000600006 LRPPRCP42704 1394 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-205ENST00000600006 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
CHMP2A-205ENST00000600006 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
CHMP2A-205ENST00000600006 NHSL1Q5SYE7 1610 aa11.71□□□□□ -0.53
CHMP2A-205ENST00000600006 ADGRB1O14514 1584 aa11.71□□□□□ -0.54
CHMP2A-205ENST00000600006 ATF3P18847 181 aa11.7□□□□□ -0.54
CHMP2A-205ENST00000600006 YTHDC2Q9H6S0 1430 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-205ENST00000600006 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
CHMP2A-205ENST00000600006 DISP3Q9P2K9 1392 aa11.69□□□□□ -0.54
CHMP2A-205ENST00000600006 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
CHMP2A-205ENST00000600006 C14orf93Q9H972 538 aaKnown RBP11.68□□□□□ -0.54
CHMP2A-205ENST00000600006 DLC1Q96QB1 1528 aa11.68□□□□□ -0.54
CHMP2A-205ENST00000600006 KIAA1210Q9ULL0 1709 aa11.68□□□□□ -0.54
CHMP2A-205ENST00000600006 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
CHMP2A-205ENST00000600006 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
CHMP2A-205ENST00000600006 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
CHMP2A-205ENST00000600006 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
CHMP2A-205ENST00000600006 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
CHMP2A-205ENST00000600006 CFAP70Q5T0N1 1121 aa11.65□□□□□ -0.54
CHMP2A-205ENST00000600006 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
CHMP2A-205ENST00000600006 ADGRB2O60241 1585 aa11.65□□□□□ -0.54
CHMP2A-205ENST00000600006 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms