RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 ZFYVE9O95405 1425 aa30.84■■■□□ 2.53
PAF1-207ENST00000598127 RIMS2Q9UQ26 1411 aa30.83■■■□□ 2.53
PAF1-207ENST00000598127 KIF1BO60333 1816 aa30.83■■■□□ 2.53
PAF1-207ENST00000598127 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.81■■■□□ 2.52
PAF1-207ENST00000598127 PPP1R15AO75807 674 aaPredicted RBP30.75■■■□□ 2.51
PAF1-207ENST00000598127 ZNF326Q5BKZ1 582 aaKnown RBP30.74■■■□□ 2.51
PAF1-207ENST00000598127 PLEKHG1Q9ULL1 1385 aa30.73■■■□□ 2.51
PAF1-207ENST00000598127 NUTM2DQ5VT03 806 aaPredicted RBP30.71■■■□□ 2.51
PAF1-207ENST00000598127 BCANQ96GW7 911 aa30.71■■■□□ 2.51
PAF1-207ENST00000598127 CCDC144AA2RUR9 1427 aa30.71■■■□□ 2.51
PAF1-207ENST00000598127 SLC26A8Q96RN1 970 aa30.69■■■□□ 2.5
PAF1-207ENST00000598127 FBXO41Q8TF61 875 aa30.68■■■□□ 2.5
PAF1-207ENST00000598127 CPS1P31327 1500 aa30.68■■■□□ 2.5
PAF1-207ENST00000598127 TRIM26Q12899 539 aaPredicted RBP30.67■■■□□ 2.5
PAF1-207ENST00000598127 STRCP1A6NGW2 1772 aa30.66■■■□□ 2.5
PAF1-207ENST00000598127 IQSEC2Q5JU85 1478 aa30.66■■■□□ 2.5
PAF1-207ENST00000598127 SENP3Q9H4L4 574 aaPredicted RBP30.64■■■□□ 2.5
PAF1-207ENST00000598127 RPGRIP1LQ68CZ1 1315 aa30.64■■■□□ 2.5
PAF1-207ENST00000598127 NEXMIFQ5QGS0 1516 aa30.63■■■□□ 2.49
PAF1-207ENST00000598127 ILDR1Q86SU0 546 aaPredicted RBP30.63■■■□□ 2.49
PAF1-207ENST00000598127 TBX22Q9Y458 520 aa30.63■■■□□ 2.49
PAF1-207ENST00000598127 ANKRD30BQ9BXX2 1392 aa30.59■■■□□ 2.49
PAF1-207ENST00000598127 KCNA6P17658 529 aa30.59■■■□□ 2.49
PAF1-207ENST00000598127 ADAMTS13Q76LX8 1427 aa30.58■■■□□ 2.49
PAF1-207ENST00000598127 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
PAF1-207ENST00000598127 SPATA31E1Q6ZUB1 1445 aa30.57■■■□□ 2.48
PAF1-207ENST00000598127 DIP2AQ14689 1571 aa30.56■■■□□ 2.48
PAF1-207ENST00000598127 CHD2O14647 1828 aaKnown RBP30.56■■■□□ 2.48
PAF1-207ENST00000598127 PPLO60437 1756 aa30.56■■■□□ 2.48
PAF1-207ENST00000598127 RGL3Q3MIN7 710 aa30.55■■■□□ 2.48
PAF1-207ENST00000598127 SETBP1Q9Y6X0 1596 aa30.54■■■□□ 2.48
PAF1-207ENST00000598127 LRRC7Q96NW7 1537 aa30.52■■■□□ 2.48
PAF1-207ENST00000598127 NRXN3Q9Y4C0 1643 aa30.51■■■□□ 2.48
PAF1-207ENST00000598127 PIK3R4Q99570 1358 aa30.51■■■□□ 2.47
PAF1-207ENST00000598127 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
PAF1-207ENST00000598127 IFT172Q9UG01 1749 aa30.47■■■□□ 2.47
PAF1-207ENST00000598127 PROSER2Q86WR7 435 aaPredicted RBP30.45■■■□□ 2.47
PAF1-207ENST00000598127 XIRP1Q702N8 1843 aaKnown RBP30.45■■■□□ 2.46
PAF1-207ENST00000598127 NKTRP30414 1462 aaKnown RBP30.44■■■□□ 2.46
PAF1-207ENST00000598127 UBAP1LF5GYI3 381 aa30.43■■■□□ 2.46
PAF1-207ENST00000598127 ADGRF5Q8IZF2 1346 aa30.41■■■□□ 2.46
PAF1-207ENST00000598127 AMOTL2Q9Y2J4 779 aa30.4■■■□□ 2.46
PAF1-207ENST00000598127 METP08581 1390 aa30.4■■■□□ 2.46
PAF1-207ENST00000598127 TOM1O60784 492 aa30.39■■■□□ 2.46
PAF1-207ENST00000598127 TMEM94Q12767 1356 aa30.39■■■□□ 2.45
PAF1-207ENST00000598127 PTPRUQ92729 1446 aa30.39■■■□□ 2.45
PAF1-207ENST00000598127 ALKQ9UM73 1620 aa30.38■■■□□ 2.45
PAF1-207ENST00000598127 SETD1AO15047 1707 aaKnown RBP30.36■■■□□ 2.45
PAF1-207ENST00000598127 RBM33Q96EV2 1170 aaKnown RBP30.34■■■□□ 2.45
PAF1-207ENST00000598127 XRN1Q8IZH2 1706 aaKnown RBP30.32■■■□□ 2.44
PAF1-207ENST00000598127 MYOM2P54296 1465 aa30.31■■■□□ 2.44
PAF1-207ENST00000598127 NCOA3Q9Y6Q9 1424 aa30.3■■■□□ 2.44
PAF1-207ENST00000598127 STAC3Q96MF2 364 aa30.3■■■□□ 2.44
PAF1-207ENST00000598127 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
PAF1-207ENST00000598127 DHX57Q6P158 1386 aaKnown RBP30.28■■■□□ 2.44
PAF1-207ENST00000598127 NRXN1Q9ULB1 1477 aa30.27■■■□□ 2.44
PAF1-207ENST00000598127 DCAF11Q8TEB1 546 aa30.27■■■□□ 2.44
PAF1-207ENST00000598127 PIP4K2BP78356 416 aa30.24■■■□□ 2.43
PAF1-207ENST00000598127 C14orf93Q9H972 538 aaKnown RBP30.24■■■□□ 2.43
PAF1-207ENST00000598127 KDM2AQ9Y2K7 1162 aa30.24■■■□□ 2.43
PAF1-207ENST00000598127 MSH6P52701 1360 aa30.24■■■□□ 2.43
PAF1-207ENST00000598127 C14orf37Q86TY3 774 aa30.21■■■□□ 2.43
PAF1-207ENST00000598127 SCAF1Q9H7N4 1312 aaKnown RBP30.21■■■□□ 2.43
PAF1-207ENST00000598127 C19orf44Q9H6X5 657 aa30.2■■■□□ 2.43
PAF1-207ENST00000598127 CFAP70Q5T0N1 1121 aa30.19■■■□□ 2.42
PAF1-207ENST00000598127 LAMC1P11047 1609 aa30.18■■■□□ 2.42
PAF1-207ENST00000598127 SIN3AQ96ST3 1273 aa30.18■■■□□ 2.42
PAF1-207ENST00000598127 PRAG1Q86YV5 1406 aa30.18■■■□□ 2.42
PAF1-207ENST00000598127 TMEM132EQ6IEE7 984 aa30.17■■■□□ 2.42
PAF1-207ENST00000598127 PCGF6Q9BYE7 350 aa30.17■■■□□ 2.42
PAF1-207ENST00000598127 PTCH1Q13635 1447 aa30.16■■■□□ 2.42
PAF1-207ENST00000598127 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.16■■■□□ 2.42
PAF1-207ENST00000598127 LRPPRCP42704 1394 aaKnown RBP30.15■■■□□ 2.42
PAF1-207ENST00000598127 ROBO2Q9HCK4 1378 aa30.15■■■□□ 2.42
PAF1-207ENST00000598127 ASXL1Q8IXJ9 1541 aa30.14■■■□□ 2.42
PAF1-207ENST00000598127 ABCC11Q96J66 1382 aa30.13■■■□□ 2.41
PAF1-207ENST00000598127 NEUROD1Q13562 356 aa30.12■■■□□ 2.41
PAF1-207ENST00000598127 CADPS2Q86UW7 1296 aa30.12■■■□□ 2.41
PAF1-207ENST00000598127 STK26Q9P289 416 aa30.12■■■□□ 2.41
PAF1-207ENST00000598127 ATF3P18847 181 aa30.11■■■□□ 2.41
PAF1-207ENST00000598127 SLAIN2Q9P270 581 aa30.11■■■□□ 2.41
PAF1-207ENST00000598127 YTHDC2Q9H6S0 1430 aaKnown RBP30.1■■■□□ 2.41
PAF1-207ENST00000598127 TECPR2O15040 1411 aa30.09■■■□□ 2.41
PAF1-207ENST00000598127 FAM135BQ49AJ0 1406 aa30.09■■■□□ 2.41
PAF1-207ENST00000598127 KNDC1Q76NI1 1749 aa30.08■■■□□ 2.41
PAF1-207ENST00000598127 DCCP43146 1447 aa30.07■■■□□ 2.4
PAF1-207ENST00000598127 ADGRL3Q9HAR2 1447 aa30.07■■■□□ 2.4
PAF1-207ENST00000598127 L3MBTL2Q969R5 705 aa30.07■■■□□ 2.4
PAF1-207ENST00000598127 SIRT1Q96EB6 747 aa30.06■■■□□ 2.4
PAF1-207ENST00000598127 NALCNQ8IZF0 1738 aa30.05■■■□□ 2.4
PAF1-207ENST00000598127 HSPA1LP34931 641 aa30.05■■■□□ 2.4
PAF1-207ENST00000598127 WAPLQ7Z5K2 1190 aa30.02■■■□□ 2.4
PAF1-207ENST00000598127 ADGRB1O14514 1584 aa30.02■■■□□ 2.4
PAF1-207ENST00000598127 ROBO1Q9Y6N7 1651 aa30.01■■■□□ 2.4
PAF1-207ENST00000598127 KIAA1210Q9ULL0 1709 aa29.99■■■□□ 2.39
PAF1-207ENST00000598127 PLEKHH1Q9ULM0 1364 aa29.95■■■□□ 2.39
PAF1-207ENST00000598127 DLC1Q96QB1 1528 aa29.95■■■□□ 2.38
PAF1-207ENST00000598127 MST1RQ04912 1400 aa29.95■■■□□ 2.38
PAF1-207ENST00000598127 TRAK1Q9UPV9 953 aa29.94■■■□□ 2.38
PAF1-207ENST00000598127 PRAM1Q96QH2 718 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms