RNA–Protein interactions for RNA: ENST00000596822.5

IRF3-215, Transcript of interferon regulatory factor 3, humanhuman

TSL 3 BASIC

Gene IRF3, Length 823 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-215ENST00000596822 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
IRF3-215ENST00000596822 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
IRF3-215ENST00000596822 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
IRF3-215ENST00000596822 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
IRF3-215ENST00000596822 TOM1O60784 492 aa21.54■■□□□ 1.04
IRF3-215ENST00000596822 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
IRF3-215ENST00000596822 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.04
IRF3-215ENST00000596822 SLC26A8Q96RN1 970 aa21.52■■□□□ 1.04
IRF3-215ENST00000596822 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
IRF3-215ENST00000596822 CHD2O14647 1828 aaKnown RBP21.5■■□□□ 1.03
IRF3-215ENST00000596822 PLEKHG1Q9ULL1 1385 aa21.5■■□□□ 1.03
IRF3-215ENST00000596822 PIP4K2BP78356 416 aa21.5■■□□□ 1.03
IRF3-215ENST00000596822 CLTCL1P53675 1640 aa21.5■■□□□ 1.03
IRF3-215ENST00000596822 TRPM2O94759 1503 aa21.5■■□□□ 1.03
IRF3-215ENST00000596822 NWD1Q149M9 1564 aa21.47■■□□□ 1.03
IRF3-215ENST00000596822 DIP2AQ14689 1571 aa21.46■■□□□ 1.03
IRF3-215ENST00000596822 KCNA6P17658 529 aa21.45■■□□□ 1.02
IRF3-215ENST00000596822 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
IRF3-215ENST00000596822 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
IRF3-215ENST00000596822 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
IRF3-215ENST00000596822 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
IRF3-215ENST00000596822 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
IRF3-215ENST00000596822 ALKQ9UM73 1620 aa21.42■■□□□ 1.02
IRF3-215ENST00000596822 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
IRF3-215ENST00000596822 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
IRF3-215ENST00000596822 NEXMIFQ5QGS0 1516 aa21.36■■□□□ 1.01
IRF3-215ENST00000596822 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
IRF3-215ENST00000596822 NRXN3Q9Y4C0 1643 aa21.36■■□□□ 1.01
IRF3-215ENST00000596822 HSPA1LP34931 641 aa21.35■■□□□ 1.01
IRF3-215ENST00000596822 SETBP1Q9Y6X0 1596 aa21.35■■□□□ 1.01
IRF3-215ENST00000596822 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
IRF3-215ENST00000596822 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
IRF3-215ENST00000596822 PPLO60437 1756 aa21.34■■□□□ 1.01
IRF3-215ENST00000596822 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
IRF3-215ENST00000596822 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
IRF3-215ENST00000596822 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
IRF3-215ENST00000596822 MSH6P52701 1360 aa21.32■■□□□ 1
IRF3-215ENST00000596822 FOXD1Q16676 465 aa21.3■■□□□ 1
IRF3-215ENST00000596822 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
IRF3-215ENST00000596822 C14orf37Q86TY3 774 aa21.29■■□□□ 1
IRF3-215ENST00000596822 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
IRF3-215ENST00000596822 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
IRF3-215ENST00000596822 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
IRF3-215ENST00000596822 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
IRF3-215ENST00000596822 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
IRF3-215ENST00000596822 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
IRF3-215ENST00000596822 AMOTL2Q9Y2J4 779 aa21.25■□□□□ 0.99
IRF3-215ENST00000596822 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
IRF3-215ENST00000596822 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
IRF3-215ENST00000596822 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
IRF3-215ENST00000596822 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
IRF3-215ENST00000596822 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
IRF3-215ENST00000596822 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
IRF3-215ENST00000596822 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
IRF3-215ENST00000596822 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
IRF3-215ENST00000596822 METP08581 1390 aa21.2■□□□□ 0.98
IRF3-215ENST00000596822 ATF3P18847 181 aa21.18■□□□□ 0.98
IRF3-215ENST00000596822 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
IRF3-215ENST00000596822 SLAIN2Q9P270 581 aa21.18■□□□□ 0.98
IRF3-215ENST00000596822 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
IRF3-215ENST00000596822 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
IRF3-215ENST00000596822 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
IRF3-215ENST00000596822 CADPS2Q86UW7 1296 aa21.15■□□□□ 0.98
IRF3-215ENST00000596822 DCCP43146 1447 aa21.12■□□□□ 0.97
IRF3-215ENST00000596822 ANKRD30BQ9BXX2 1392 aa21.12■□□□□ 0.97
IRF3-215ENST00000596822 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
IRF3-215ENST00000596822 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
IRF3-215ENST00000596822 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
IRF3-215ENST00000596822 ADGRF5Q8IZF2 1346 aa21.08■□□□□ 0.97
IRF3-215ENST00000596822 LAMC1P11047 1609 aa21.07■□□□□ 0.96
IRF3-215ENST00000596822 HRCP23327 699 aa21.07■□□□□ 0.96
IRF3-215ENST00000596822 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
IRF3-215ENST00000596822 COL16A1Q07092 1604 aaPredicted RBP21.06■□□□□ 0.96
IRF3-215ENST00000596822 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
IRF3-215ENST00000596822 AHDC1Q5TGY3 1603 aaPredicted RBP21.05■□□□□ 0.96
IRF3-215ENST00000596822 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
IRF3-215ENST00000596822 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
IRF3-215ENST00000596822 MST1RQ04912 1400 aa21.03■□□□□ 0.96
IRF3-215ENST00000596822 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
IRF3-215ENST00000596822 MYOM2P54296 1465 aa21.02■□□□□ 0.96
IRF3-215ENST00000596822 NHSL1Q5SYE7 1610 aa21.02■□□□□ 0.96
IRF3-215ENST00000596822 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
IRF3-215ENST00000596822 SHPRHQ149N8 1683 aa21■□□□□ 0.95
IRF3-215ENST00000596822 STK26Q9P289 416 aa21■□□□□ 0.95
IRF3-215ENST00000596822 JCADQ9P266 1359 aa20.99■□□□□ 0.95
IRF3-215ENST00000596822 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
IRF3-215ENST00000596822 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
IRF3-215ENST00000596822 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
IRF3-215ENST00000596822 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
IRF3-215ENST00000596822 CDC42BPGQ6DT37 1551 aa20.96■□□□□ 0.95
IRF3-215ENST00000596822 TECPR2O15040 1411 aa20.95■□□□□ 0.94
IRF3-215ENST00000596822 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
IRF3-215ENST00000596822 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
IRF3-215ENST00000596822 SOCS7O14512 581 aa20.92■□□□□ 0.94
IRF3-215ENST00000596822 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
IRF3-215ENST00000596822 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
IRF3-215ENST00000596822 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
IRF3-215ENST00000596822 CFAP70Q5T0N1 1121 aa20.91■□□□□ 0.94
IRF3-215ENST00000596822 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
IRF3-215ENST00000596822 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms