RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
TRIM47-206ENST00000592942 RIMS2Q9UQ26 1411 aa22.71■■□□□ 1.23
TRIM47-206ENST00000592942 DISP3Q9P2K9 1392 aa22.7■■□□□ 1.22
TRIM47-206ENST00000592942 IQGAP1P46940 1657 aa22.69■■□□□ 1.22
TRIM47-206ENST00000592942 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
TRIM47-206ENST00000592942 ILDR2Q71H61 639 aa22.69■■□□□ 1.22
TRIM47-206ENST00000592942 NUTM2DQ5VT03 806 aaPredicted RBP22.68■■□□□ 1.22
TRIM47-206ENST00000592942 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
TRIM47-206ENST00000592942 SOCS7O14512 581 aa22.66■■□□□ 1.22
TRIM47-206ENST00000592942 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRIM47-206ENST00000592942 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.21
TRIM47-206ENST00000592942 PLEKHG1Q9ULL1 1385 aa22.63■■□□□ 1.21
TRIM47-206ENST00000592942 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
TRIM47-206ENST00000592942 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-206ENST00000592942 ANKRD30BQ9BXX2 1392 aa22.62■■□□□ 1.21
TRIM47-206ENST00000592942 KIF1BO60333 1816 aa22.61■■□□□ 1.21
TRIM47-206ENST00000592942 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
TRIM47-206ENST00000592942 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-206ENST00000592942 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
TRIM47-206ENST00000592942 TBX22Q9Y458 520 aa22.58■■□□□ 1.21
TRIM47-206ENST00000592942 STRCP1A6NGW2 1772 aa22.58■■□□□ 1.2
TRIM47-206ENST00000592942 ADAMTS13Q76LX8 1427 aa22.57■■□□□ 1.2
TRIM47-206ENST00000592942 NEXMIFQ5QGS0 1516 aa22.57■■□□□ 1.2
TRIM47-206ENST00000592942 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
TRIM47-206ENST00000592942 BCANQ96GW7 911 aa22.56■■□□□ 1.2
TRIM47-206ENST00000592942 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
TRIM47-206ENST00000592942 KCNA6P17658 529 aa22.53■■□□□ 1.2
TRIM47-206ENST00000592942 CPS1P31327 1500 aa22.52■■□□□ 1.2
TRIM47-206ENST00000592942 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
TRIM47-206ENST00000592942 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
TRIM47-206ENST00000592942 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
TRIM47-206ENST00000592942 LRRC7Q96NW7 1537 aa22.48■■□□□ 1.19
TRIM47-206ENST00000592942 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
TRIM47-206ENST00000592942 ADGRF5Q8IZF2 1346 aa22.47■■□□□ 1.19
TRIM47-206ENST00000592942 PPLO60437 1756 aa22.46■■□□□ 1.19
TRIM47-206ENST00000592942 PTPRUQ92729 1446 aa22.45■■□□□ 1.18
TRIM47-206ENST00000592942 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.18
TRIM47-206ENST00000592942 METP08581 1390 aa22.44■■□□□ 1.18
TRIM47-206ENST00000592942 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
TRIM47-206ENST00000592942 DIP2AQ14689 1571 aa22.43■■□□□ 1.18
TRIM47-206ENST00000592942 NWD1Q149M9 1564 aa22.42■■□□□ 1.18
TRIM47-206ENST00000592942 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
TRIM47-206ENST00000592942 IFT172Q9UG01 1749 aa22.41■■□□□ 1.18
TRIM47-206ENST00000592942 RBM33Q96EV2 1170 aaKnown RBP22.41■■□□□ 1.18
TRIM47-206ENST00000592942 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
TRIM47-206ENST00000592942 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
TRIM47-206ENST00000592942 TMEM94Q12767 1356 aa22.38■■□□□ 1.17
TRIM47-206ENST00000592942 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
TRIM47-206ENST00000592942 ALKQ9UM73 1620 aa22.38■■□□□ 1.17
TRIM47-206ENST00000592942 NKTRP30414 1462 aaKnown RBP22.36■■□□□ 1.17
TRIM47-206ENST00000592942 UBAP1LF5GYI3 381 aa22.36■■□□□ 1.17
TRIM47-206ENST00000592942 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
TRIM47-206ENST00000592942 SETD1AO15047 1707 aaKnown RBP22.36■■□□□ 1.17
TRIM47-206ENST00000592942 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
TRIM47-206ENST00000592942 PCGF6Q9BYE7 350 aa22.35■■□□□ 1.17
TRIM47-206ENST00000592942 PIK3C2GO75747 1445 aa22.34■■□□□ 1.17
TRIM47-206ENST00000592942 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
TRIM47-206ENST00000592942 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
TRIM47-206ENST00000592942 MYOM2P54296 1465 aa22.33■■□□□ 1.16
TRIM47-206ENST00000592942 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
TRIM47-206ENST00000592942 TOM1O60784 492 aa22.31■■□□□ 1.16
TRIM47-206ENST00000592942 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
TRIM47-206ENST00000592942 CFAP70Q5T0N1 1121 aa22.3■■□□□ 1.16
TRIM47-206ENST00000592942 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
TRIM47-206ENST00000592942 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
TRIM47-206ENST00000592942 NCOA3Q9Y6Q9 1424 aa22.29■■□□□ 1.16
TRIM47-206ENST00000592942 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
TRIM47-206ENST00000592942 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
TRIM47-206ENST00000592942 PRAG1Q86YV5 1406 aa22.25■■□□□ 1.15
TRIM47-206ENST00000592942 NEUROD1Q13562 356 aa22.25■■□□□ 1.15
TRIM47-206ENST00000592942 PIP4K2BP78356 416 aa22.24■■□□□ 1.15
TRIM47-206ENST00000592942 L3MBTL2Q969R5 705 aa22.23■■□□□ 1.15
TRIM47-206ENST00000592942 C19orf44Q9H6X5 657 aa22.23■■□□□ 1.15
TRIM47-206ENST00000592942 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
TRIM47-206ENST00000592942 ABCC11Q96J66 1382 aa22.22■■□□□ 1.15
TRIM47-206ENST00000592942 STK26Q9P289 416 aa22.21■■□□□ 1.15
TRIM47-206ENST00000592942 MSH6P52701 1360 aa22.21■■□□□ 1.15
TRIM47-206ENST00000592942 PTCH1Q13635 1447 aa22.21■■□□□ 1.15
TRIM47-206ENST00000592942 TECPR2O15040 1411 aa22.19■■□□□ 1.14
TRIM47-206ENST00000592942 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
TRIM47-206ENST00000592942 C14orf37Q86TY3 774 aa22.18■■□□□ 1.14
TRIM47-206ENST00000592942 WAPLQ7Z5K2 1190 aa22.17■■□□□ 1.14
TRIM47-206ENST00000592942 SIRT1Q96EB6 747 aa22.17■■□□□ 1.14
TRIM47-206ENST00000592942 SLAIN2Q9P270 581 aa22.17■■□□□ 1.14
TRIM47-206ENST00000592942 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.17■■□□□ 1.14
TRIM47-206ENST00000592942 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
TRIM47-206ENST00000592942 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
TRIM47-206ENST00000592942 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
TRIM47-206ENST00000592942 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.14
TRIM47-206ENST00000592942 LAMC1P11047 1609 aa22.14■■□□□ 1.14
TRIM47-206ENST00000592942 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.13
TRIM47-206ENST00000592942 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
TRIM47-206ENST00000592942 ATF3P18847 181 aa22.13■■□□□ 1.13
TRIM47-206ENST00000592942 HSPA1LP34931 641 aa22.13■■□□□ 1.13
TRIM47-206ENST00000592942 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
TRIM47-206ENST00000592942 DCCP43146 1447 aa22.11■■□□□ 1.13
TRIM47-206ENST00000592942 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
TRIM47-206ENST00000592942 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
TRIM47-206ENST00000592942 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
TRIM47-206ENST00000592942 NBPF8Q3BBV2 869 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms