RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 KIF1BO60333 1816 aa22.47■■□□□ 1.19
ERCC1-217ENST00000592905 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
ERCC1-217ENST00000592905 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
ERCC1-217ENST00000592905 BCANQ96GW7 911 aa22.46■■□□□ 1.19
ERCC1-217ENST00000592905 PPP1R15AO75807 674 aaPredicted RBP22.45■■□□□ 1.18
ERCC1-217ENST00000592905 ILDR1Q86SU0 546 aaPredicted RBP22.45■■□□□ 1.18
ERCC1-217ENST00000592905 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
ERCC1-217ENST00000592905 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
ERCC1-217ENST00000592905 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
ERCC1-217ENST00000592905 STRCP1A6NGW2 1772 aa22.43■■□□□ 1.18
ERCC1-217ENST00000592905 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.41■■□□□ 1.18
ERCC1-217ENST00000592905 HRCP23327 699 aa22.39■■□□□ 1.17
ERCC1-217ENST00000592905 FBXO41Q8TF61 875 aa22.38■■□□□ 1.17
ERCC1-217ENST00000592905 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
ERCC1-217ENST00000592905 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
ERCC1-217ENST00000592905 CPS1P31327 1500 aa22.33■■□□□ 1.17
ERCC1-217ENST00000592905 NEXMIFQ5QGS0 1516 aa22.33■■□□□ 1.17
ERCC1-217ENST00000592905 RGL3Q3MIN7 710 aa22.33■■□□□ 1.17
ERCC1-217ENST00000592905 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
ERCC1-217ENST00000592905 ADAMTS13Q76LX8 1427 aa22.3■■□□□ 1.16
ERCC1-217ENST00000592905 PPLO60437 1756 aa22.28■■□□□ 1.16
ERCC1-217ENST00000592905 KCNA6P17658 529 aa22.28■■□□□ 1.16
ERCC1-217ENST00000592905 TBX22Q9Y458 520 aa22.28■■□□□ 1.16
ERCC1-217ENST00000592905 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
ERCC1-217ENST00000592905 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
ERCC1-217ENST00000592905 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
ERCC1-217ENST00000592905 NRXN3Q9Y4C0 1643 aa22.27■■□□□ 1.16
ERCC1-217ENST00000592905 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
ERCC1-217ENST00000592905 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
ERCC1-217ENST00000592905 RBM33Q96EV2 1170 aaKnown RBP22.26■■□□□ 1.15
ERCC1-217ENST00000592905 XIRP1Q702N8 1843 aaKnown RBP22.25■■□□□ 1.15
ERCC1-217ENST00000592905 UBAP1LF5GYI3 381 aa22.25■■□□□ 1.15
ERCC1-217ENST00000592905 RPGRIP1LQ68CZ1 1315 aa22.25■■□□□ 1.15
ERCC1-217ENST00000592905 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
ERCC1-217ENST00000592905 SETBP1Q9Y6X0 1596 aa22.23■■□□□ 1.15
ERCC1-217ENST00000592905 DIP2AQ14689 1571 aa22.22■■□□□ 1.15
ERCC1-217ENST00000592905 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
ERCC1-217ENST00000592905 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
ERCC1-217ENST00000592905 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
ERCC1-217ENST00000592905 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
ERCC1-217ENST00000592905 PTPRUQ92729 1446 aa22.19■■□□□ 1.14
ERCC1-217ENST00000592905 METP08581 1390 aa22.18■■□□□ 1.14
ERCC1-217ENST00000592905 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
ERCC1-217ENST00000592905 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
ERCC1-217ENST00000592905 PIP4K2BP78356 416 aa22.16■■□□□ 1.14
ERCC1-217ENST00000592905 PIK3R4Q99570 1358 aa22.15■■□□□ 1.14
ERCC1-217ENST00000592905 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
ERCC1-217ENST00000592905 ALKQ9UM73 1620 aa22.15■■□□□ 1.14
ERCC1-217ENST00000592905 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
ERCC1-217ENST00000592905 SETD1AO15047 1707 aaKnown RBP22.14■■□□□ 1.14
ERCC1-217ENST00000592905 TOM1O60784 492 aa22.14■■□□□ 1.13
ERCC1-217ENST00000592905 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
ERCC1-217ENST00000592905 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
ERCC1-217ENST00000592905 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
ERCC1-217ENST00000592905 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
ERCC1-217ENST00000592905 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
ERCC1-217ENST00000592905 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
ERCC1-217ENST00000592905 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
ERCC1-217ENST00000592905 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
ERCC1-217ENST00000592905 MSH6P52701 1360 aa22.04■■□□□ 1.12
ERCC1-217ENST00000592905 MYOM2P54296 1465 aa22.03■■□□□ 1.12
ERCC1-217ENST00000592905 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
ERCC1-217ENST00000592905 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
ERCC1-217ENST00000592905 STK26Q9P289 416 aa22.03■■□□□ 1.12
ERCC1-217ENST00000592905 NEUROD1Q13562 356 aa22.02■■□□□ 1.12
ERCC1-217ENST00000592905 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.02■■□□□ 1.12
ERCC1-217ENST00000592905 NRXN1Q9ULB1 1477 aa22.02■■□□□ 1.12
ERCC1-217ENST00000592905 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
ERCC1-217ENST00000592905 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
ERCC1-217ENST00000592905 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
ERCC1-217ENST00000592905 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
ERCC1-217ENST00000592905 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
ERCC1-217ENST00000592905 HSPA1LP34931 641 aa21.98■■□□□ 1.11
ERCC1-217ENST00000592905 ATF3P18847 181 aa21.96■■□□□ 1.11
ERCC1-217ENST00000592905 SLAIN2Q9P270 581 aa21.96■■□□□ 1.11
ERCC1-217ENST00000592905 NALCNQ8IZF0 1738 aa21.95■■□□□ 1.1
ERCC1-217ENST00000592905 PTCH1Q13635 1447 aa21.95■■□□□ 1.1
ERCC1-217ENST00000592905 LAMC1P11047 1609 aa21.95■■□□□ 1.1
ERCC1-217ENST00000592905 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
ERCC1-217ENST00000592905 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
ERCC1-217ENST00000592905 YTHDC2Q9H6S0 1430 aaKnown RBP21.94■■□□□ 1.1
ERCC1-217ENST00000592905 ROBO1Q9Y6N7 1651 aa21.93■■□□□ 1.1
ERCC1-217ENST00000592905 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
ERCC1-217ENST00000592905 L3MBTL2Q969R5 705 aa21.92■■□□□ 1.1
ERCC1-217ENST00000592905 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
ERCC1-217ENST00000592905 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
ERCC1-217ENST00000592905 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
ERCC1-217ENST00000592905 ABCC11Q96J66 1382 aa21.9■■□□□ 1.1
ERCC1-217ENST00000592905 KNDC1Q76NI1 1749 aa21.9■■□□□ 1.1
ERCC1-217ENST00000592905 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
ERCC1-217ENST00000592905 PLEKHH1Q9ULM0 1364 aa21.89■■□□□ 1.1
ERCC1-217ENST00000592905 TECPR2O15040 1411 aa21.88■■□□□ 1.09
ERCC1-217ENST00000592905 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
ERCC1-217ENST00000592905 TRAK1Q9UPV9 953 aa21.87■■□□□ 1.09
ERCC1-217ENST00000592905 SAFB2Q14151 953 aaKnown RBP eCLIP21.86■■□□□ 1.09
ERCC1-217ENST00000592905 DCCP43146 1447 aa21.85■■□□□ 1.09
ERCC1-217ENST00000592905 MST1RQ04912 1400 aa21.84■■□□□ 1.09
ERCC1-217ENST00000592905 NBPF1Q3BBV0 1214 aa21.83■■□□□ 1.09
ERCC1-217ENST00000592905 PRAM1Q96QH2 718 aa21.83■■□□□ 1.09
ERCC1-217ENST00000592905 SIRT1Q96EB6 747 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms