RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
APOC1-208ENST00000592535 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
APOC1-208ENST00000592535 TOM1O60784 492 aa20.93■□□□□ 0.94
APOC1-208ENST00000592535 PLEKHG1Q9ULL1 1385 aa20.93■□□□□ 0.94
APOC1-208ENST00000592535 BCANQ96GW7 911 aa20.92■□□□□ 0.94
APOC1-208ENST00000592535 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
APOC1-208ENST00000592535 HDGFP51858 240 aaKnown RBP20.91■□□□□ 0.94
APOC1-208ENST00000592535 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
APOC1-208ENST00000592535 TRIM52Q96A61 297 aa20.91■□□□□ 0.94
APOC1-208ENST00000592535 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
APOC1-208ENST00000592535 CLTCL1P53675 1640 aa20.9■□□□□ 0.94
APOC1-208ENST00000592535 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
APOC1-208ENST00000592535 NWD1Q149M9 1564 aa20.89■□□□□ 0.94
APOC1-208ENST00000592535 TRPM2O94759 1503 aa20.89■□□□□ 0.94
APOC1-208ENST00000592535 KCNA6P17658 529 aa20.89■□□□□ 0.93
APOC1-208ENST00000592535 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.89■□□□□ 0.93
APOC1-208ENST00000592535 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
APOC1-208ENST00000592535 KIF1BO60333 1816 aa20.86■□□□□ 0.93
APOC1-208ENST00000592535 NKTRP30414 1462 aaKnown RBP20.84■□□□□ 0.93
APOC1-208ENST00000592535 ADAMTS13Q76LX8 1427 aa20.84■□□□□ 0.93
APOC1-208ENST00000592535 TMEM94Q12767 1356 aa20.84■□□□□ 0.93
APOC1-208ENST00000592535 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
APOC1-208ENST00000592535 DIP2AQ14689 1571 aa20.83■□□□□ 0.92
APOC1-208ENST00000592535 HSPA1LP34931 641 aa20.82■□□□□ 0.92
APOC1-208ENST00000592535 PROSER2Q86WR7 435 aaPredicted RBP20.82■□□□□ 0.92
APOC1-208ENST00000592535 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
APOC1-208ENST00000592535 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
APOC1-208ENST00000592535 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
APOC1-208ENST00000592535 NRXN3Q9Y4C0 1643 aa20.8■□□□□ 0.92
APOC1-208ENST00000592535 NEXMIFQ5QGS0 1516 aa20.79■□□□□ 0.92
APOC1-208ENST00000592535 SETBP1Q9Y6X0 1596 aa20.76■□□□□ 0.91
APOC1-208ENST00000592535 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
APOC1-208ENST00000592535 PIK3R4Q99570 1358 aa20.75■□□□□ 0.91
APOC1-208ENST00000592535 FOXD1Q16676 465 aa20.75■□□□□ 0.91
APOC1-208ENST00000592535 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
APOC1-208ENST00000592535 SETD5Q9C0A6 1442 aa20.73■□□□□ 0.91
APOC1-208ENST00000592535 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
APOC1-208ENST00000592535 MSH6P52701 1360 aa20.71■□□□□ 0.91
APOC1-208ENST00000592535 XRN1Q8IZH2 1706 aaKnown RBP20.7■□□□□ 0.9
APOC1-208ENST00000592535 PPLO60437 1756 aa20.7■□□□□ 0.9
APOC1-208ENST00000592535 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
APOC1-208ENST00000592535 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
APOC1-208ENST00000592535 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
APOC1-208ENST00000592535 METP08581 1390 aa20.67■□□□□ 0.9
APOC1-208ENST00000592535 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
APOC1-208ENST00000592535 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
APOC1-208ENST00000592535 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
APOC1-208ENST00000592535 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
APOC1-208ENST00000592535 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
APOC1-208ENST00000592535 SETD1AO15047 1707 aaKnown RBP20.66■□□□□ 0.9
APOC1-208ENST00000592535 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
APOC1-208ENST00000592535 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.89
APOC1-208ENST00000592535 C14orf37Q86TY3 774 aa20.64■□□□□ 0.89
APOC1-208ENST00000592535 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
APOC1-208ENST00000592535 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
APOC1-208ENST00000592535 ILDR2Q71H61 639 aa20.62■□□□□ 0.89
APOC1-208ENST00000592535 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
APOC1-208ENST00000592535 SLAIN2Q9P270 581 aa20.61■□□□□ 0.89
APOC1-208ENST00000592535 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
APOC1-208ENST00000592535 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
APOC1-208ENST00000592535 PHLPP1O60346 1717 aa20.57■□□□□ 0.88
APOC1-208ENST00000592535 ATF3P18847 181 aa20.56■□□□□ 0.88
APOC1-208ENST00000592535 CADPS2Q86UW7 1296 aa20.56■□□□□ 0.88
APOC1-208ENST00000592535 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
APOC1-208ENST00000592535 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
APOC1-208ENST00000592535 DCCP43146 1447 aa20.53■□□□□ 0.88
APOC1-208ENST00000592535 ANKRD30BQ9BXX2 1392 aa20.52■□□□□ 0.88
APOC1-208ENST00000592535 PTCH1Q13635 1447 aa20.52■□□□□ 0.87
APOC1-208ENST00000592535 ADGRL3Q9HAR2 1447 aa20.52■□□□□ 0.87
APOC1-208ENST00000592535 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
APOC1-208ENST00000592535 COL16A1Q07092 1604 aaPredicted RBP20.5■□□□□ 0.87
APOC1-208ENST00000592535 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
APOC1-208ENST00000592535 MST1RQ04912 1400 aa20.49■□□□□ 0.87
APOC1-208ENST00000592535 PIK3C2GO75747 1445 aa20.48■□□□□ 0.87
APOC1-208ENST00000592535 HRCP23327 699 aa20.48■□□□□ 0.87
APOC1-208ENST00000592535 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
APOC1-208ENST00000592535 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
APOC1-208ENST00000592535 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
APOC1-208ENST00000592535 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
APOC1-208ENST00000592535 MYOM2P54296 1465 aa20.44■□□□□ 0.86
APOC1-208ENST00000592535 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
APOC1-208ENST00000592535 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
APOC1-208ENST00000592535 JCADQ9P266 1359 aa20.43■□□□□ 0.86
APOC1-208ENST00000592535 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
APOC1-208ENST00000592535 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
APOC1-208ENST00000592535 STK26Q9P289 416 aa20.41■□□□□ 0.86
APOC1-208ENST00000592535 LRPPRCP42704 1394 aaKnown RBP20.41■□□□□ 0.86
APOC1-208ENST00000592535 TECPR2O15040 1411 aa20.41■□□□□ 0.86
APOC1-208ENST00000592535 LAMC1P11047 1609 aa20.41■□□□□ 0.86
APOC1-208ENST00000592535 SHPRHQ149N8 1683 aa20.39■□□□□ 0.86
APOC1-208ENST00000592535 SOCS7O14512 581 aa20.39■□□□□ 0.85
APOC1-208ENST00000592535 C1orf167Q5SNV9 1468 aa20.38■□□□□ 0.85
APOC1-208ENST00000592535 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
APOC1-208ENST00000592535 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
APOC1-208ENST00000592535 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
APOC1-208ENST00000592535 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
APOC1-208ENST00000592535 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
APOC1-208ENST00000592535 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
APOC1-208ENST00000592535 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
APOC1-208ENST00000592535 PLEKHH1Q9ULM0 1364 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms