RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 TRPM2O94759 1503 aa30.45■■■□□ 2.47
CIRBP-239ENST00000592467 CLTCL1P53675 1640 aa30.44■■■□□ 2.46
CIRBP-239ENST00000592467 SLC26A8Q96RN1 970 aa30.44■■■□□ 2.46
CIRBP-239ENST00000592467 NWD1Q149M9 1564 aa30.42■■■□□ 2.46
CIRBP-239ENST00000592467 CHGAP10645 457 aaKnown RBP30.42■■■□□ 2.46
CIRBP-239ENST00000592467 CHD2O14647 1828 aaKnown RBP30.38■■■□□ 2.45
CIRBP-239ENST00000592467 KCNA6P17658 529 aa30.37■■■□□ 2.45
CIRBP-239ENST00000592467 TRIM52Q96A61 297 aa30.37■■■□□ 2.45
CIRBP-239ENST00000592467 ADAMTS13Q76LX8 1427 aa30.37■■■□□ 2.45
CIRBP-239ENST00000592467 TOM1O60784 492 aa30.36■■■□□ 2.45
CIRBP-239ENST00000592467 HDGFP51858 240 aaKnown RBP30.36■■■□□ 2.45
CIRBP-239ENST00000592467 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.36■■■□□ 2.45
CIRBP-239ENST00000592467 NUTM2DQ5VT03 806 aaPredicted RBP30.34■■■□□ 2.45
CIRBP-239ENST00000592467 PPP1R15AO75807 674 aaPredicted RBP30.33■■■□□ 2.45
CIRBP-239ENST00000592467 SENP3Q9H4L4 574 aaPredicted RBP30.33■■■□□ 2.45
CIRBP-239ENST00000592467 KIF1BO60333 1816 aa30.32■■■□□ 2.44
CIRBP-239ENST00000592467 NRXN3Q9Y4C0 1643 aa30.32■■■□□ 2.44
CIRBP-239ENST00000592467 NKTRP30414 1462 aaKnown RBP30.31■■■□□ 2.44
CIRBP-239ENST00000592467 SLC4A1APQ9BWU0 796 aaKnown RBP30.31■■■□□ 2.44
CIRBP-239ENST00000592467 TBX22Q9Y458 520 aa30.31■■■□□ 2.44
CIRBP-239ENST00000592467 DIP2AQ14689 1571 aa30.31■■■□□ 2.44
CIRBP-239ENST00000592467 NEXMIFQ5QGS0 1516 aa30.3■■■□□ 2.44
CIRBP-239ENST00000592467 PIP4K2BP78356 416 aa30.28■■■□□ 2.44
CIRBP-239ENST00000592467 BCANQ96GW7 911 aa30.28■■■□□ 2.44
CIRBP-239ENST00000592467 TMEM94Q12767 1356 aa30.28■■■□□ 2.44
CIRBP-239ENST00000592467 SETBP1Q9Y6X0 1596 aa30.26■■■□□ 2.43
CIRBP-239ENST00000592467 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
CIRBP-239ENST00000592467 FOXD1Q16676 465 aa30.22■■■□□ 2.43
CIRBP-239ENST00000592467 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
CIRBP-239ENST00000592467 PIK3R4Q99570 1358 aa30.21■■■□□ 2.43
CIRBP-239ENST00000592467 HSPA1LP34931 641 aa30.21■■■□□ 2.43
CIRBP-239ENST00000592467 PROSER2Q86WR7 435 aaPredicted RBP30.21■■■□□ 2.43
CIRBP-239ENST00000592467 RBM33Q96EV2 1170 aaKnown RBP30.21■■■□□ 2.43
CIRBP-239ENST00000592467 MPHOSPH9Q99550 1183 aa30.2■■■□□ 2.43
CIRBP-239ENST00000592467 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
CIRBP-239ENST00000592467 ZNF326Q5BKZ1 582 aaKnown RBP30.19■■■□□ 2.42
CIRBP-239ENST00000592467 XRN1Q8IZH2 1706 aaKnown RBP30.15■■■□□ 2.42
CIRBP-239ENST00000592467 PPLO60437 1756 aa30.15■■■□□ 2.42
CIRBP-239ENST00000592467 RAB3GAP2Q9H2M9 1393 aa30.13■■■□□ 2.41
CIRBP-239ENST00000592467 SETD1AO15047 1707 aaKnown RBP30.12■■■□□ 2.41
CIRBP-239ENST00000592467 NCOA3Q9Y6Q9 1424 aa30.11■■■□□ 2.41
CIRBP-239ENST00000592467 METP08581 1390 aa30.1■■■□□ 2.41
CIRBP-239ENST00000592467 ACIN1Q9UKV3 1341 aaKnown RBP30.09■■■□□ 2.41
CIRBP-239ENST00000592467 FAM135BQ49AJ0 1406 aa30.08■■■□□ 2.41
CIRBP-239ENST00000592467 SPATA31E1Q6ZUB1 1445 aa30.08■■■□□ 2.41
CIRBP-239ENST00000592467 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
CIRBP-239ENST00000592467 RPGRIP1LQ68CZ1 1315 aa30.07■■■□□ 2.4
CIRBP-239ENST00000592467 AMOTL2Q9Y2J4 779 aa30.07■■■□□ 2.4
CIRBP-239ENST00000592467 IFT172Q9UG01 1749 aa30.06■■■□□ 2.4
CIRBP-239ENST00000592467 MSH6P52701 1360 aa30.05■■■□□ 2.4
CIRBP-239ENST00000592467 ROBO1Q9Y6N7 1651 aa30.04■■■□□ 2.4
CIRBP-239ENST00000592467 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.04■■■□□ 2.4
CIRBP-239ENST00000592467 DISP3Q9P2K9 1392 aa30.03■■■□□ 2.4
CIRBP-239ENST00000592467 VGFO15240 615 aaPredicted RBP30.02■■■□□ 2.4
CIRBP-239ENST00000592467 MED1Q15648 1581 aaPredicted RBP29.97■■■□□ 2.39
CIRBP-239ENST00000592467 SLAIN2Q9P270 581 aa29.95■■■□□ 2.39
CIRBP-239ENST00000592467 HRCP23327 699 aa29.94■■■□□ 2.38
CIRBP-239ENST00000592467 C19orf44Q9H6X5 657 aa29.94■■■□□ 2.38
CIRBP-239ENST00000592467 PRAG1Q86YV5 1406 aa29.94■■■□□ 2.38
CIRBP-239ENST00000592467 ADGRF5Q8IZF2 1346 aa29.93■■■□□ 2.38
CIRBP-239ENST00000592467 RGL3Q3MIN7 710 aa29.91■■■□□ 2.38
CIRBP-239ENST00000592467 NALCNQ8IZF0 1738 aa29.9■■■□□ 2.38
CIRBP-239ENST00000592467 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
CIRBP-239ENST00000592467 DCCP43146 1447 aa29.89■■■□□ 2.38
CIRBP-239ENST00000592467 ILDR2Q71H61 639 aa29.89■■■□□ 2.38
CIRBP-239ENST00000592467 PTCH1Q13635 1447 aa29.88■■■□□ 2.37
CIRBP-239ENST00000592467 C14orf37Q86TY3 774 aa29.88■■■□□ 2.37
CIRBP-239ENST00000592467 CADPS2Q86UW7 1296 aa29.87■■■□□ 2.37
CIRBP-239ENST00000592467 ROBO2Q9HCK4 1378 aa29.85■■■□□ 2.37
CIRBP-239ENST00000592467 PIK3C2GO75747 1445 aa29.85■■■□□ 2.37
CIRBP-239ENST00000592467 ADGRL3Q9HAR2 1447 aa29.85■■■□□ 2.37
CIRBP-239ENST00000592467 ASXL1Q8IXJ9 1541 aa29.85■■■□□ 2.37
CIRBP-239ENST00000592467 PHLPP1O60346 1717 aa29.85■■■□□ 2.37
CIRBP-239ENST00000592467 NRXN1Q9ULB1 1477 aa29.83■■■□□ 2.37
CIRBP-239ENST00000592467 ATF3P18847 181 aa29.83■■■□□ 2.37
CIRBP-239ENST00000592467 COL16A1Q07092 1604 aaPredicted RBP29.82■■■□□ 2.36
CIRBP-239ENST00000592467 MST1RQ04912 1400 aa29.81■■■□□ 2.36
CIRBP-239ENST00000592467 MYOM2P54296 1465 aa29.8■■■□□ 2.36
CIRBP-239ENST00000592467 AHDC1Q5TGY3 1603 aaPredicted RBP29.79■■■□□ 2.36
CIRBP-239ENST00000592467 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.36
CIRBP-239ENST00000592467 TECPR2O15040 1411 aa29.76■■■□□ 2.35
CIRBP-239ENST00000592467 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
CIRBP-239ENST00000592467 LRPPRCP42704 1394 aaKnown RBP29.72■■■□□ 2.35
CIRBP-239ENST00000592467 NHSL1Q5SYE7 1610 aa29.71■■■□□ 2.35
CIRBP-239ENST00000592467 LAMC1P11047 1609 aa29.71■■■□□ 2.35
CIRBP-239ENST00000592467 C14orf93Q9H972 538 aaKnown RBP29.7■■■□□ 2.35
CIRBP-239ENST00000592467 ABCC11Q96J66 1382 aa29.69■■■□□ 2.34
CIRBP-239ENST00000592467 TMEM132EQ6IEE7 984 aa29.69■■■□□ 2.34
CIRBP-239ENST00000592467 C1orf167Q5SNV9 1468 aa29.67■■■□□ 2.34
CIRBP-239ENST00000592467 JCADQ9P266 1359 aa29.66■■■□□ 2.34
CIRBP-239ENST00000592467 YTHDC2Q9H6S0 1430 aaKnown RBP29.66■■■□□ 2.34
CIRBP-239ENST00000592467 CDC42BPGQ6DT37 1551 aa29.65■■■□□ 2.34
CIRBP-239ENST00000592467 CFAP70Q5T0N1 1121 aa29.65■■■□□ 2.34
CIRBP-239ENST00000592467 SHPRHQ149N8 1683 aa29.64■■■□□ 2.34
CIRBP-239ENST00000592467 DHX57Q6P158 1386 aaKnown RBP29.64■■■□□ 2.33
CIRBP-239ENST00000592467 STK26Q9P289 416 aa29.63■■■□□ 2.33
CIRBP-239ENST00000592467 PLEKHH1Q9ULM0 1364 aa29.63■■■□□ 2.33
CIRBP-239ENST00000592467 WAPLQ7Z5K2 1190 aa29.62■■■□□ 2.33
CIRBP-239ENST00000592467 RGS17Q9UGC6 210 aaPredicted RBP29.62■■■□□ 2.33
CIRBP-239ENST00000592467 ADGRB1O14514 1584 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms