RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
CTDP1-206ENST00000590635 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
CTDP1-206ENST00000590635 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
CTDP1-206ENST00000590635 TOM1O60784 492 aa18.06■□□□□ 0.48
CTDP1-206ENST00000590635 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
CTDP1-206ENST00000590635 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
CTDP1-206ENST00000590635 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
CTDP1-206ENST00000590635 KCNA6P17658 529 aa18.05■□□□□ 0.48
CTDP1-206ENST00000590635 HRCP23327 699 aa18.05■□□□□ 0.48
CTDP1-206ENST00000590635 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
CTDP1-206ENST00000590635 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
CTDP1-206ENST00000590635 TRPM2O94759 1503 aa18.04■□□□□ 0.48
CTDP1-206ENST00000590635 RPGRIP1LQ68CZ1 1315 aa18■□□□□ 0.47
CTDP1-206ENST00000590635 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
CTDP1-206ENST00000590635 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
CTDP1-206ENST00000590635 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
CTDP1-206ENST00000590635 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
CTDP1-206ENST00000590635 PIK3R4Q99570 1358 aa17.98■□□□□ 0.47
CTDP1-206ENST00000590635 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
CTDP1-206ENST00000590635 FOXD1Q16676 465 aa17.97■□□□□ 0.47
CTDP1-206ENST00000590635 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
CTDP1-206ENST00000590635 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
CTDP1-206ENST00000590635 CLTCL1P53675 1640 aa17.95■□□□□ 0.46
CTDP1-206ENST00000590635 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
CTDP1-206ENST00000590635 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
CTDP1-206ENST00000590635 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
CTDP1-206ENST00000590635 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
CTDP1-206ENST00000590635 KIF1BO60333 1816 aa17.93■□□□□ 0.46
CTDP1-206ENST00000590635 TMEM94Q12767 1356 aa17.92■□□□□ 0.46
CTDP1-206ENST00000590635 STRCP1A6NGW2 1772 aa17.92■□□□□ 0.46
CTDP1-206ENST00000590635 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
CTDP1-206ENST00000590635 PIP4K2BP78356 416 aa17.91■□□□□ 0.46
CTDP1-206ENST00000590635 NCOA3Q9Y6Q9 1424 aa17.9■□□□□ 0.46
CTDP1-206ENST00000590635 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
CTDP1-206ENST00000590635 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
CTDP1-206ENST00000590635 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
CTDP1-206ENST00000590635 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
CTDP1-206ENST00000590635 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
CTDP1-206ENST00000590635 MSH6P52701 1360 aa17.87■□□□□ 0.45
CTDP1-206ENST00000590635 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
CTDP1-206ENST00000590635 CHD2O14647 1828 aaKnown RBP17.86■□□□□ 0.45
CTDP1-206ENST00000590635 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
CTDP1-206ENST00000590635 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
CTDP1-206ENST00000590635 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
CTDP1-206ENST00000590635 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
CTDP1-206ENST00000590635 METP08581 1390 aa17.82■□□□□ 0.44
CTDP1-206ENST00000590635 HSPA1LP34931 641 aa17.81■□□□□ 0.44
CTDP1-206ENST00000590635 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
CTDP1-206ENST00000590635 STAC3Q96MF2 364 aa17.81■□□□□ 0.44
CTDP1-206ENST00000590635 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
CTDP1-206ENST00000590635 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
CTDP1-206ENST00000590635 ATF3P18847 181 aa17.8■□□□□ 0.44
CTDP1-206ENST00000590635 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
CTDP1-206ENST00000590635 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
CTDP1-206ENST00000590635 ADGRF5Q8IZF2 1346 aa17.78■□□□□ 0.44
CTDP1-206ENST00000590635 XIRP1Q702N8 1843 aaKnown RBP17.77■□□□□ 0.44
CTDP1-206ENST00000590635 ALKQ9UM73 1620 aa17.77■□□□□ 0.44
CTDP1-206ENST00000590635 PPLO60437 1756 aa17.76■□□□□ 0.43
CTDP1-206ENST00000590635 DCCP43146 1447 aa17.73■□□□□ 0.43
CTDP1-206ENST00000590635 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CTDP1-206ENST00000590635 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
CTDP1-206ENST00000590635 C14orf93Q9H972 538 aaKnown RBP17.72■□□□□ 0.43
CTDP1-206ENST00000590635 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
CTDP1-206ENST00000590635 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
CTDP1-206ENST00000590635 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
CTDP1-206ENST00000590635 MYOM2P54296 1465 aa17.7■□□□□ 0.42
CTDP1-206ENST00000590635 DCAF11Q8TEB1 546 aa17.7■□□□□ 0.42
CTDP1-206ENST00000590635 LRPPRCP42704 1394 aaKnown RBP17.68■□□□□ 0.42
CTDP1-206ENST00000590635 ABCC11Q96J66 1382 aa17.68■□□□□ 0.42
CTDP1-206ENST00000590635 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
CTDP1-206ENST00000590635 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
CTDP1-206ENST00000590635 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
CTDP1-206ENST00000590635 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
CTDP1-206ENST00000590635 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
CTDP1-206ENST00000590635 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
CTDP1-206ENST00000590635 DISP3Q9P2K9 1392 aa17.66■□□□□ 0.42
CTDP1-206ENST00000590635 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
CTDP1-206ENST00000590635 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
CTDP1-206ENST00000590635 STK26Q9P289 416 aa17.66■□□□□ 0.42
CTDP1-206ENST00000590635 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
CTDP1-206ENST00000590635 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
CTDP1-206ENST00000590635 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-206ENST00000590635 TECPR2O15040 1411 aa17.65■□□□□ 0.42
CTDP1-206ENST00000590635 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.41
CTDP1-206ENST00000590635 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
CTDP1-206ENST00000590635 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
CTDP1-206ENST00000590635 MST1RQ04912 1400 aa17.61■□□□□ 0.41
CTDP1-206ENST00000590635 LAMC1P11047 1609 aa17.61■□□□□ 0.41
CTDP1-206ENST00000590635 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
CTDP1-206ENST00000590635 JCADQ9P266 1359 aa17.57■□□□□ 0.4
CTDP1-206ENST00000590635 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
CTDP1-206ENST00000590635 POGKQ9P215 609 aa17.56■□□□□ 0.4
CTDP1-206ENST00000590635 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
CTDP1-206ENST00000590635 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
CTDP1-206ENST00000590635 ASXL1Q8IXJ9 1541 aa17.55■□□□□ 0.4
CTDP1-206ENST00000590635 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
CTDP1-206ENST00000590635 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
CTDP1-206ENST00000590635 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
CTDP1-206ENST00000590635 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
CTDP1-206ENST00000590635 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms