RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
SCAMP4-212ENST00000590266 KDM5AP29375 1690 aaKnown RBP20.84■□□□□ 0.93
SCAMP4-212ENST00000590266 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.93
SCAMP4-212ENST00000590266 HDGFP51858 240 aaKnown RBP20.83■□□□□ 0.93
SCAMP4-212ENST00000590266 SLC26A8Q96RN1 970 aa20.83■□□□□ 0.93
SCAMP4-212ENST00000590266 SPHKAPQ2M3C7 1700 aa20.83■□□□□ 0.92
SCAMP4-212ENST00000590266 TRPM2O94759 1503 aa20.82■□□□□ 0.92
SCAMP4-212ENST00000590266 ZFYVE9O95405 1425 aa20.81■□□□□ 0.92
SCAMP4-212ENST00000590266 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCAMP4-212ENST00000590266 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
SCAMP4-212ENST00000590266 CLTCL1P53675 1640 aa20.79■□□□□ 0.92
SCAMP4-212ENST00000590266 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
SCAMP4-212ENST00000590266 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-212ENST00000590266 CPS1P31327 1500 aa20.77■□□□□ 0.92
SCAMP4-212ENST00000590266 PLEKHG1Q9ULL1 1385 aa20.76■□□□□ 0.91
SCAMP4-212ENST00000590266 TOM1O60784 492 aa20.75■□□□□ 0.91
SCAMP4-212ENST00000590266 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
SCAMP4-212ENST00000590266 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
SCAMP4-212ENST00000590266 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
SCAMP4-212ENST00000590266 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
SCAMP4-212ENST00000590266 KCNA6P17658 529 aa20.67■□□□□ 0.9
SCAMP4-212ENST00000590266 HRCP23327 699 aa20.66■□□□□ 0.9
SCAMP4-212ENST00000590266 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-212ENST00000590266 LRRC7Q96NW7 1537 aa20.66■□□□□ 0.9
SCAMP4-212ENST00000590266 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
SCAMP4-212ENST00000590266 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
SCAMP4-212ENST00000590266 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
SCAMP4-212ENST00000590266 PROSER2Q86WR7 435 aaPredicted RBP20.64■□□□□ 0.89
SCAMP4-212ENST00000590266 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.89
SCAMP4-212ENST00000590266 KIF1BO60333 1816 aa20.63■□□□□ 0.89
SCAMP4-212ENST00000590266 VGFO15240 615 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-212ENST00000590266 RPGRIP1LQ68CZ1 1315 aa20.61■□□□□ 0.89
SCAMP4-212ENST00000590266 HSPA1LP34931 641 aa20.61■□□□□ 0.89
SCAMP4-212ENST00000590266 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
SCAMP4-212ENST00000590266 SPATA31E1Q6ZUB1 1445 aa20.59■□□□□ 0.89
SCAMP4-212ENST00000590266 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
SCAMP4-212ENST00000590266 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.89
SCAMP4-212ENST00000590266 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
SCAMP4-212ENST00000590266 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
SCAMP4-212ENST00000590266 SETBP1Q9Y6X0 1596 aa20.57■□□□□ 0.88
SCAMP4-212ENST00000590266 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-212ENST00000590266 NWD1Q149M9 1564 aa20.56■□□□□ 0.88
SCAMP4-212ENST00000590266 ILDR2Q71H61 639 aa20.56■□□□□ 0.88
SCAMP4-212ENST00000590266 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
SCAMP4-212ENST00000590266 METP08581 1390 aa20.56■□□□□ 0.88
SCAMP4-212ENST00000590266 NRXN3Q9Y4C0 1643 aa20.55■□□□□ 0.88
SCAMP4-212ENST00000590266 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
SCAMP4-212ENST00000590266 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
SCAMP4-212ENST00000590266 PTPRUQ92729 1446 aa20.54■□□□□ 0.88
SCAMP4-212ENST00000590266 MSH6P52701 1360 aa20.49■□□□□ 0.87
SCAMP4-212ENST00000590266 PPLO60437 1756 aa20.49■□□□□ 0.87
SCAMP4-212ENST00000590266 SOCS7O14512 581 aa20.48■□□□□ 0.87
SCAMP4-212ENST00000590266 ALKQ9UM73 1620 aa20.47■□□□□ 0.87
SCAMP4-212ENST00000590266 KDM2AQ9Y2K7 1162 aa20.47■□□□□ 0.87
SCAMP4-212ENST00000590266 CHD2O14647 1828 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-212ENST00000590266 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
SCAMP4-212ENST00000590266 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-212ENST00000590266 STK26Q9P289 416 aa20.44■□□□□ 0.86
SCAMP4-212ENST00000590266 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
SCAMP4-212ENST00000590266 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-212ENST00000590266 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
SCAMP4-212ENST00000590266 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-212ENST00000590266 ATF3P18847 181 aa20.41■□□□□ 0.86
SCAMP4-212ENST00000590266 MYOM2P54296 1465 aa20.41■□□□□ 0.86
SCAMP4-212ENST00000590266 CFAP70Q5T0N1 1121 aa20.4■□□□□ 0.86
SCAMP4-212ENST00000590266 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
SCAMP4-212ENST00000590266 IFT172Q9UG01 1749 aa20.4■□□□□ 0.86
SCAMP4-212ENST00000590266 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
SCAMP4-212ENST00000590266 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
SCAMP4-212ENST00000590266 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
SCAMP4-212ENST00000590266 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
SCAMP4-212ENST00000590266 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
SCAMP4-212ENST00000590266 DHX57Q6P158 1386 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-212ENST00000590266 SETD1AO15047 1707 aaKnown RBP20.37■□□□□ 0.85
SCAMP4-212ENST00000590266 CADPS2Q86UW7 1296 aa20.37■□□□□ 0.85
SCAMP4-212ENST00000590266 SIN3AQ96ST3 1273 aa20.37■□□□□ 0.85
SCAMP4-212ENST00000590266 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
SCAMP4-212ENST00000590266 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-212ENST00000590266 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
SCAMP4-212ENST00000590266 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
SCAMP4-212ENST00000590266 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
SCAMP4-212ENST00000590266 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-212ENST00000590266 ADGRL3Q9HAR2 1447 aa20.33■□□□□ 0.84
SCAMP4-212ENST00000590266 WAPLQ7Z5K2 1190 aa20.32■□□□□ 0.84
SCAMP4-212ENST00000590266 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
SCAMP4-212ENST00000590266 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-212ENST00000590266 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.31■□□□□ 0.84
SCAMP4-212ENST00000590266 DCCP43146 1447 aa20.29■□□□□ 0.84
SCAMP4-212ENST00000590266 STAC3Q96MF2 364 aa20.29■□□□□ 0.84
SCAMP4-212ENST00000590266 ABCC11Q96J66 1382 aa20.29■□□□□ 0.84
SCAMP4-212ENST00000590266 PLEKHH1Q9ULM0 1364 aa20.29■□□□□ 0.84
SCAMP4-212ENST00000590266 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
SCAMP4-212ENST00000590266 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
SCAMP4-212ENST00000590266 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCAMP4-212ENST00000590266 TRAK1Q9UPV9 953 aa20.27■□□□□ 0.84
SCAMP4-212ENST00000590266 LAMC1P11047 1609 aa20.27■□□□□ 0.83
SCAMP4-212ENST00000590266 TECPR2O15040 1411 aa20.27■□□□□ 0.83
SCAMP4-212ENST00000590266 L3MBTL2Q969R5 705 aa20.26■□□□□ 0.83
SCAMP4-212ENST00000590266 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
SCAMP4-212ENST00000590266 MST1RQ04912 1400 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms