RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 PPP1R15AO75807 674 aaPredicted RBP30.27■■■□□ 2.44
LDLRAD4-212ENST00000587905 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
LDLRAD4-212ENST00000587905 BCANQ96GW7 911 aa30.26■■■□□ 2.43
LDLRAD4-212ENST00000587905 KIF1BO60333 1816 aa30.26■■■□□ 2.43
LDLRAD4-212ENST00000587905 ZFYVE9O95405 1425 aa30.25■■■□□ 2.43
LDLRAD4-212ENST00000587905 NUTM2DQ5VT03 806 aaPredicted RBP30.25■■■□□ 2.43
LDLRAD4-212ENST00000587905 ZNF326Q5BKZ1 582 aaKnown RBP30.24■■■□□ 2.43
LDLRAD4-212ENST00000587905 HDGFP51858 240 aaKnown RBP30.22■■■□□ 2.43
LDLRAD4-212ENST00000587905 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.19■■■□□ 2.42
LDLRAD4-212ENST00000587905 SLC26A8Q96RN1 970 aa30.17■■■□□ 2.42
LDLRAD4-212ENST00000587905 CCDC144AA2RUR9 1427 aa30.15■■■□□ 2.42
LDLRAD4-212ENST00000587905 PLEKHG1Q9ULL1 1385 aa30.15■■■□□ 2.42
LDLRAD4-212ENST00000587905 HRCP23327 699 aa30.14■■■□□ 2.42
LDLRAD4-212ENST00000587905 STRCP1A6NGW2 1772 aa30.13■■■□□ 2.41
LDLRAD4-212ENST00000587905 CPS1P31327 1500 aa30.12■■■□□ 2.41
LDLRAD4-212ENST00000587905 FBXO41Q8TF61 875 aa30.11■■■□□ 2.41
LDLRAD4-212ENST00000587905 NEXMIFQ5QGS0 1516 aa30.09■■■□□ 2.41
LDLRAD4-212ENST00000587905 TRIM26Q12899 539 aaPredicted RBP30.05■■■□□ 2.4
LDLRAD4-212ENST00000587905 IQSEC2Q5JU85 1478 aa30.04■■■□□ 2.4
LDLRAD4-212ENST00000587905 RGL3Q3MIN7 710 aa30.03■■■□□ 2.4
LDLRAD4-212ENST00000587905 ADAMTS13Q76LX8 1427 aa30.01■■■□□ 2.39
LDLRAD4-212ENST00000587905 PPLO60437 1756 aa30■■■□□ 2.39
LDLRAD4-212ENST00000587905 LRRC7Q96NW7 1537 aa29.99■■■□□ 2.39
LDLRAD4-212ENST00000587905 DIP2AQ14689 1571 aa29.98■■■□□ 2.39
LDLRAD4-212ENST00000587905 SPATA31E1Q6ZUB1 1445 aa29.98■■■□□ 2.39
LDLRAD4-212ENST00000587905 NRXN3Q9Y4C0 1643 aa29.98■■■□□ 2.39
LDLRAD4-212ENST00000587905 TBX22Q9Y458 520 aa29.98■■■□□ 2.39
LDLRAD4-212ENST00000587905 RPGRIP1LQ68CZ1 1315 aa29.97■■■□□ 2.39
LDLRAD4-212ENST00000587905 KCNA6P17658 529 aa29.97■■■□□ 2.39
LDLRAD4-212ENST00000587905 ANKRD30BQ9BXX2 1392 aa29.97■■■□□ 2.39
LDLRAD4-212ENST00000587905 SETBP1Q9Y6X0 1596 aa29.97■■■□□ 2.39
LDLRAD4-212ENST00000587905 CHD2O14647 1828 aaKnown RBP29.95■■■□□ 2.39
LDLRAD4-212ENST00000587905 VGFO15240 615 aaPredicted RBP29.95■■■□□ 2.39
LDLRAD4-212ENST00000587905 NWD1Q149M9 1564 aa29.94■■■□□ 2.38
LDLRAD4-212ENST00000587905 UBAP1LF5GYI3 381 aa29.93■■■□□ 2.38
LDLRAD4-212ENST00000587905 IFT172Q9UG01 1749 aa29.91■■■□□ 2.38
LDLRAD4-212ENST00000587905 PROSER2Q86WR7 435 aaPredicted RBP29.9■■■□□ 2.38
LDLRAD4-212ENST00000587905 RBM33Q96EV2 1170 aaKnown RBP29.9■■■□□ 2.38
LDLRAD4-212ENST00000587905 XIRP1Q702N8 1843 aaKnown RBP29.89■■■□□ 2.38
LDLRAD4-212ENST00000587905 NKTRP30414 1462 aaKnown RBP29.89■■■□□ 2.38
LDLRAD4-212ENST00000587905 TMEM94Q12767 1356 aa29.87■■■□□ 2.37
LDLRAD4-212ENST00000587905 PIK3R4Q99570 1358 aa29.86■■■□□ 2.37
LDLRAD4-212ENST00000587905 ADGRF5Q8IZF2 1346 aa29.85■■■□□ 2.37
LDLRAD4-212ENST00000587905 METP08581 1390 aa29.85■■■□□ 2.37
LDLRAD4-212ENST00000587905 PTPRUQ92729 1446 aa29.84■■■□□ 2.37
LDLRAD4-212ENST00000587905 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
LDLRAD4-212ENST00000587905 AMOTL2Q9Y2J4 779 aa29.83■■■□□ 2.37
LDLRAD4-212ENST00000587905 ALKQ9UM73 1620 aa29.82■■■□□ 2.36
LDLRAD4-212ENST00000587905 TOM1O60784 492 aa29.81■■■□□ 2.36
LDLRAD4-212ENST00000587905 SETD1AO15047 1707 aaKnown RBP29.81■■■□□ 2.36
LDLRAD4-212ENST00000587905 PIP4K2BP78356 416 aa29.8■■■□□ 2.36
LDLRAD4-212ENST00000587905 XRN1Q8IZH2 1706 aaKnown RBP29.78■■■□□ 2.36
LDLRAD4-212ENST00000587905 C14orf37Q86TY3 774 aa29.76■■■□□ 2.35
LDLRAD4-212ENST00000587905 MYOM2P54296 1465 aa29.74■■■□□ 2.35
LDLRAD4-212ENST00000587905 PIK3C2GO75747 1445 aa29.73■■■□□ 2.35
LDLRAD4-212ENST00000587905 KDM2AQ9Y2K7 1162 aa29.72■■■□□ 2.35
LDLRAD4-212ENST00000587905 DHX57Q6P158 1386 aaKnown RBP29.72■■■□□ 2.35
LDLRAD4-212ENST00000587905 DCAF11Q8TEB1 546 aa29.71■■■□□ 2.35
LDLRAD4-212ENST00000587905 MSH6P52701 1360 aa29.71■■■□□ 2.35
LDLRAD4-212ENST00000587905 NRXN1Q9ULB1 1477 aa29.68■■■□□ 2.34
LDLRAD4-212ENST00000587905 TMEM132EQ6IEE7 984 aa29.65■■■□□ 2.34
LDLRAD4-212ENST00000587905 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
LDLRAD4-212ENST00000587905 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.34
LDLRAD4-212ENST00000587905 STK26Q9P289 416 aa29.64■■■□□ 2.34
LDLRAD4-212ENST00000587905 ASXL1Q8IXJ9 1541 aa29.64■■■□□ 2.34
LDLRAD4-212ENST00000587905 LAMC1P11047 1609 aa29.63■■■□□ 2.33
LDLRAD4-212ENST00000587905 NCOA3Q9Y6Q9 1424 aa29.63■■■□□ 2.33
LDLRAD4-212ENST00000587905 CFAP70Q5T0N1 1121 aa29.63■■■□□ 2.33
LDLRAD4-212ENST00000587905 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
LDLRAD4-212ENST00000587905 NEUROD1Q13562 356 aa29.62■■■□□ 2.33
LDLRAD4-212ENST00000587905 C14orf93Q9H972 538 aaKnown RBP29.61■■■□□ 2.33
LDLRAD4-212ENST00000587905 ROBO2Q9HCK4 1378 aa29.61■■■□□ 2.33
LDLRAD4-212ENST00000587905 PTCH1Q13635 1447 aa29.6■■■□□ 2.33
LDLRAD4-212ENST00000587905 C19orf44Q9H6X5 657 aa29.59■■■□□ 2.33
LDLRAD4-212ENST00000587905 NALCNQ8IZF0 1738 aa29.57■■■□□ 2.32
LDLRAD4-212ENST00000587905 ATF3P18847 181 aa29.57■■■□□ 2.32
LDLRAD4-212ENST00000587905 LRPPRCP42704 1394 aaKnown RBP29.56■■■□□ 2.32
LDLRAD4-212ENST00000587905 STAC3Q96MF2 364 aa29.55■■■□□ 2.32
LDLRAD4-212ENST00000587905 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
LDLRAD4-212ENST00000587905 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
LDLRAD4-212ENST00000587905 HSPA1LP34931 641 aa29.54■■■□□ 2.32
LDLRAD4-212ENST00000587905 KNDC1Q76NI1 1749 aa29.54■■■□□ 2.32
LDLRAD4-212ENST00000587905 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
LDLRAD4-212ENST00000587905 CADPS2Q86UW7 1296 aa29.53■■■□□ 2.32
LDLRAD4-212ENST00000587905 SLAIN2Q9P270 581 aa29.53■■■□□ 2.32
LDLRAD4-212ENST00000587905 ROBO1Q9Y6N7 1651 aa29.53■■■□□ 2.32
LDLRAD4-212ENST00000587905 TECPR2O15040 1411 aa29.5■■■□□ 2.31
LDLRAD4-212ENST00000587905 ABCC11Q96J66 1382 aa29.5■■■□□ 2.31
LDLRAD4-212ENST00000587905 L3MBTL2Q969R5 705 aa29.49■■■□□ 2.31
LDLRAD4-212ENST00000587905 DCCP43146 1447 aa29.48■■■□□ 2.31
LDLRAD4-212ENST00000587905 FAM135BQ49AJ0 1406 aa29.48■■■□□ 2.31
LDLRAD4-212ENST00000587905 WAPLQ7Z5K2 1190 aa29.48■■■□□ 2.31
LDLRAD4-212ENST00000587905 ADGRB1O14514 1584 aa29.47■■■□□ 2.31
LDLRAD4-212ENST00000587905 PLEKHH1Q9ULM0 1364 aa29.46■■■□□ 2.31
LDLRAD4-212ENST00000587905 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
LDLRAD4-212ENST00000587905 MST1RQ04912 1400 aa29.41■■■□□ 2.3
LDLRAD4-212ENST00000587905 SAFB2Q14151 953 aaKnown RBP eCLIP29.4■■■□□ 2.3
LDLRAD4-212ENST00000587905 KIAA1210Q9ULL0 1709 aa29.4■■■□□ 2.3
LDLRAD4-212ENST00000587905 PRAM1Q96QH2 718 aa29.39■■■□□ 2.3
LDLRAD4-212ENST00000587905 DLC1Q96QB1 1528 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms