RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 SENP3Q9H4L4 574 aaPredicted RBP12.82□□□□□ -0.36
CTDP1-204ENST00000587623 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
CTDP1-204ENST00000587623 SLC26A8Q96RN1 970 aa12.81□□□□□ -0.36
CTDP1-204ENST00000587623 TRPM2O94759 1503 aa12.81□□□□□ -0.36
CTDP1-204ENST00000587623 CPS1P31327 1500 aa12.81□□□□□ -0.36
CTDP1-204ENST00000587623 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 HRCP23327 699 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 FOXD1Q16676 465 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
CTDP1-204ENST00000587623 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
CTDP1-204ENST00000587623 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
CTDP1-204ENST00000587623 MYO5BQ9ULV0 1848 aa12.78□□□□□ -0.36
CTDP1-204ENST00000587623 KIF1BO60333 1816 aa12.78□□□□□ -0.36
CTDP1-204ENST00000587623 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
CTDP1-204ENST00000587623 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
CTDP1-204ENST00000587623 TOM1O60784 492 aa12.77□□□□□ -0.37
CTDP1-204ENST00000587623 KCNA6P17658 529 aa12.77□□□□□ -0.37
CTDP1-204ENST00000587623 RPGRIP1LQ68CZ1 1315 aa12.77□□□□□ -0.37
CTDP1-204ENST00000587623 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
CTDP1-204ENST00000587623 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
CTDP1-204ENST00000587623 SCAF1Q9H7N4 1312 aaKnown RBP12.76□□□□□ -0.37
CTDP1-204ENST00000587623 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
CTDP1-204ENST00000587623 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
CTDP1-204ENST00000587623 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
CTDP1-204ENST00000587623 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
CTDP1-204ENST00000587623 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
CTDP1-204ENST00000587623 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
CTDP1-204ENST00000587623 DIP2AQ14689 1571 aa12.71□□□□□ -0.37
CTDP1-204ENST00000587623 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
CTDP1-204ENST00000587623 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
CTDP1-204ENST00000587623 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
CTDP1-204ENST00000587623 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
CTDP1-204ENST00000587623 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
CTDP1-204ENST00000587623 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
CTDP1-204ENST00000587623 MSH6P52701 1360 aa12.68□□□□□ -0.38
CTDP1-204ENST00000587623 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
CTDP1-204ENST00000587623 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
CTDP1-204ENST00000587623 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
CTDP1-204ENST00000587623 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
CTDP1-204ENST00000587623 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
CTDP1-204ENST00000587623 ATF3P18847 181 aa12.64□□□□□ -0.39
CTDP1-204ENST00000587623 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
CTDP1-204ENST00000587623 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
CTDP1-204ENST00000587623 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
CTDP1-204ENST00000587623 ADGRF5Q8IZF2 1346 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 PPLO60437 1756 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 METP08581 1390 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
CTDP1-204ENST00000587623 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
CTDP1-204ENST00000587623 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
CTDP1-204ENST00000587623 NRXN3Q9Y4C0 1643 aa12.59□□□□□ -0.39
CTDP1-204ENST00000587623 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
CTDP1-204ENST00000587623 STK26Q9P289 416 aa12.59□□□□□ -0.39
CTDP1-204ENST00000587623 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
CTDP1-204ENST00000587623 HSPA1LP34931 641 aa12.58□□□□□ -0.4
CTDP1-204ENST00000587623 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
CTDP1-204ENST00000587623 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
CTDP1-204ENST00000587623 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
CTDP1-204ENST00000587623 MYOM2P54296 1465 aa12.56□□□□□ -0.4
CTDP1-204ENST00000587623 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
CTDP1-204ENST00000587623 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
CTDP1-204ENST00000587623 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
CTDP1-204ENST00000587623 CFAP70Q5T0N1 1121 aa12.55□□□□□ -0.4
CTDP1-204ENST00000587623 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
CTDP1-204ENST00000587623 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
CTDP1-204ENST00000587623 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
CTDP1-204ENST00000587623 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
CTDP1-204ENST00000587623 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
CTDP1-204ENST00000587623 DCCP43146 1447 aa12.54□□□□□ -0.4
CTDP1-204ENST00000587623 POGKQ9P215 609 aa12.53□□□□□ -0.4
CTDP1-204ENST00000587623 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
CTDP1-204ENST00000587623 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
CTDP1-204ENST00000587623 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
CTDP1-204ENST00000587623 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
CTDP1-204ENST00000587623 LAMC1P11047 1609 aa12.51□□□□□ -0.41
CTDP1-204ENST00000587623 NRXN1Q9ULB1 1477 aa12.51□□□□□ -0.41
CTDP1-204ENST00000587623 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
CTDP1-204ENST00000587623 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
CTDP1-204ENST00000587623 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
CTDP1-204ENST00000587623 SETD1AO15047 1707 aaKnown RBP12.5□□□□□ -0.41
CTDP1-204ENST00000587623 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
CTDP1-204ENST00000587623 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
CTDP1-204ENST00000587623 SIN3AQ96ST3 1273 aa12.49□□□□□ -0.41
CTDP1-204ENST00000587623 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
CTDP1-204ENST00000587623 TECPR2O15040 1411 aa12.48□□□□□ -0.41
CTDP1-204ENST00000587623 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
CTDP1-204ENST00000587623 SAFB2Q14151 953 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTDP1-204ENST00000587623 TRAK1Q9UPV9 953 aa12.48□□□□□ -0.41
CTDP1-204ENST00000587623 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
CTDP1-204ENST00000587623 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
CTDP1-204ENST00000587623 PRAM1Q96QH2 718 aa12.47□□□□□ -0.41
CTDP1-204ENST00000587623 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
CTDP1-204ENST00000587623 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.41
CTDP1-204ENST00000587623 MST1RQ04912 1400 aa12.45□□□□□ -0.42
CTDP1-204ENST00000587623 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms