RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
UBE2O-204ENST00000587127 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
UBE2O-204ENST00000587127 USP19O94966 1318 aa14.08□□□□□ -0.16
UBE2O-204ENST00000587127 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
UBE2O-204ENST00000587127 TRMT2AQ8IZ69 625 aaKnown RBP14.06□□□□□ -0.16
UBE2O-204ENST00000587127 PANK1Q8TE04 598 aa14.06□□□□□ -0.16
UBE2O-204ENST00000587127 POGKQ9P215 609 aa14.06□□□□□ -0.16
UBE2O-204ENST00000587127 NUP160Q12769 1436 aa14.06□□□□□ -0.16
UBE2O-204ENST00000587127 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
UBE2O-204ENST00000587127 COG6Q9Y2V7 657 aa14.05□□□□□ -0.16
UBE2O-204ENST00000587127 MYO5CQ9NQX4 1742 aa14.05□□□□□ -0.16
UBE2O-204ENST00000587127 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
UBE2O-204ENST00000587127 LAMC1P11047 1609 aa14.03□□□□□ -0.16
UBE2O-204ENST00000587127 RSPH4AQ5TD94 716 aa14.03□□□□□ -0.16
UBE2O-204ENST00000587127 EIF3AQ14152 1382 aaKnown RBP14.02□□□□□ -0.16
UBE2O-204ENST00000587127 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
UBE2O-204ENST00000587127 TNNQ9UQP3 1299 aa14.02□□□□□ -0.17
UBE2O-204ENST00000587127 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
UBE2O-204ENST00000587127 ARHGAP5Q13017 1502 aa14.01□□□□□ -0.17
UBE2O-204ENST00000587127 UBE2Q2Q8WVN8 375 aa14.01□□□□□ -0.17
UBE2O-204ENST00000587127 ARXQ96QS3 562 aa14.01□□□□□ -0.17
UBE2O-204ENST00000587127 UNC13BO14795 1591 aa14.01□□□□□ -0.17
UBE2O-204ENST00000587127 CANXP27824 592 aaKnown RBP14.01□□□□□ -0.17
UBE2O-204ENST00000587127 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
UBE2O-204ENST00000587127 E9PSI1 815 aa14□□□□□ -0.17
UBE2O-204ENST00000587127 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
UBE2O-204ENST00000587127 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
UBE2O-204ENST00000587127 PREX2Q70Z35 1606 aa13.99□□□□□ -0.17
UBE2O-204ENST00000587127 CLUAP1Q96AJ1 413 aa13.99□□□□□ -0.17
UBE2O-204ENST00000587127 PIK3C2GO75747 1445 aa13.99□□□□□ -0.17
UBE2O-204ENST00000587127 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
UBE2O-204ENST00000587127 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
UBE2O-204ENST00000587127 CENPJQ9HC77 1338 aaPredicted RBP13.98□□□□□ -0.17
UBE2O-204ENST00000587127 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
UBE2O-204ENST00000587127 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
UBE2O-204ENST00000587127 SPRYD3Q8NCJ5 442 aa13.97□□□□□ -0.17
UBE2O-204ENST00000587127 TTC37Q6PGP7 1564 aa13.97□□□□□ -0.17
UBE2O-204ENST00000587127 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
UBE2O-204ENST00000587127 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
UBE2O-204ENST00000587127 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
UBE2O-204ENST00000587127 RLBP1P12271 317 aa13.96□□□□□ -0.17
UBE2O-204ENST00000587127 WWC1Q8IX03 1113 aa13.96□□□□□ -0.17
UBE2O-204ENST00000587127 PCDHB15Q9Y5E8 787 aa13.96□□□□□ -0.17
UBE2O-204ENST00000587127 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.18
UBE2O-204ENST00000587127 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
UBE2O-204ENST00000587127 ATP10AO60312 1499 aa13.95□□□□□ -0.18
UBE2O-204ENST00000587127 SCAF11Q99590 1463 aaKnown RBP13.95□□□□□ -0.18
UBE2O-204ENST00000587127 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
UBE2O-204ENST00000587127 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
UBE2O-204ENST00000587127 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
UBE2O-204ENST00000587127 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
UBE2O-204ENST00000587127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.186e-6■■■■□ 21.5
UBE2O-204ENST00000587127 SYNMO15061 1565 aa13.93□□□□□ -0.18
UBE2O-204ENST00000587127 BECN1Q14457 450 aa13.93□□□□□ -0.18
UBE2O-204ENST00000587127 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
UBE2O-204ENST00000587127 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
UBE2O-204ENST00000587127 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
UBE2O-204ENST00000587127 RRAGDQ9NQL2 400 aaPredicted RBP13.93□□□□□ -0.18
UBE2O-204ENST00000587127 ABCC2Q92887 1545 aa13.92□□□□□ -0.18
UBE2O-204ENST00000587127 IQGAP1P46940 1657 aa13.92□□□□□ -0.18
UBE2O-204ENST00000587127 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
UBE2O-204ENST00000587127 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
UBE2O-204ENST00000587127 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
UBE2O-204ENST00000587127 DUOX2Q9NRD8 1548 aa13.91□□□□□ -0.18
UBE2O-204ENST00000587127 MYOM1P52179 1685 aa13.91□□□□□ -0.18
UBE2O-204ENST00000587127 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
UBE2O-204ENST00000587127 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
UBE2O-204ENST00000587127 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
UBE2O-204ENST00000587127 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
UBE2O-204ENST00000587127 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.18
UBE2O-204ENST00000587127 PLXNC1O60486 1568 aa13.89□□□□□ -0.19
UBE2O-204ENST00000587127 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
UBE2O-204ENST00000587127 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
UBE2O-204ENST00000587127 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
UBE2O-204ENST00000587127 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
UBE2O-204ENST00000587127 PANK2Q9BZ23 570 aa13.87□□□□□ -0.19
UBE2O-204ENST00000587127 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
UBE2O-204ENST00000587127 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
UBE2O-204ENST00000587127 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
UBE2O-204ENST00000587127 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
UBE2O-204ENST00000587127 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
UBE2O-204ENST00000587127 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
UBE2O-204ENST00000587127 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
UBE2O-204ENST00000587127 SLC12A5Q9H2X9 1139 aa13.85□□□□□ -0.19
UBE2O-204ENST00000587127 CLTCL1P53675 1640 aa13.85□□□□□ -0.19
UBE2O-204ENST00000587127 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
UBE2O-204ENST00000587127 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
UBE2O-204ENST00000587127 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.19
UBE2O-204ENST00000587127 RUNDC1Q96C34 613 aa13.83□□□□□ -0.19
UBE2O-204ENST00000587127 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
UBE2O-204ENST00000587127 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.2
UBE2O-204ENST00000587127 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
UBE2O-204ENST00000587127 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
UBE2O-204ENST00000587127 TRPM2O94759 1503 aa13.83□□□□□ -0.2
UBE2O-204ENST00000587127 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
UBE2O-204ENST00000587127 NSD3Q9BZ95 1437 aa13.82□□□□□ -0.2
UBE2O-204ENST00000587127 MTHFSP49914 203 aa13.82□□□□□ -0.2
UBE2O-204ENST00000587127 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
UBE2O-204ENST00000587127 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
UBE2O-204ENST00000587127 MCM4P33991 863 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms