RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 ZFYVE9O95405 1425 aa21.79■■□□□ 1.08
CCDC130-207ENST00000587098 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
CCDC130-207ENST00000587098 TRPM2O94759 1503 aa21.76■■□□□ 1.07
CCDC130-207ENST00000587098 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
CCDC130-207ENST00000587098 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
CCDC130-207ENST00000587098 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
CCDC130-207ENST00000587098 BCANQ96GW7 911 aa21.75■■□□□ 1.07
CCDC130-207ENST00000587098 SLC26A8Q96RN1 970 aa21.75■■□□□ 1.07
CCDC130-207ENST00000587098 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
CCDC130-207ENST00000587098 HRCP23327 699 aa21.74■■□□□ 1.07
CCDC130-207ENST00000587098 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
CCDC130-207ENST00000587098 PLEKHG1Q9ULL1 1385 aa21.72■■□□□ 1.07
CCDC130-207ENST00000587098 CPS1P31327 1500 aa21.69■■□□□ 1.06
CCDC130-207ENST00000587098 IQSEC2Q5JU85 1478 aa21.68■■□□□ 1.06
CCDC130-207ENST00000587098 STRCP1A6NGW2 1772 aa21.68■■□□□ 1.06
CCDC130-207ENST00000587098 KIF1BO60333 1816 aa21.67■■□□□ 1.06
CCDC130-207ENST00000587098 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
CCDC130-207ENST00000587098 KCNA6P17658 529 aa21.65■■□□□ 1.06
CCDC130-207ENST00000587098 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
CCDC130-207ENST00000587098 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
CCDC130-207ENST00000587098 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
CCDC130-207ENST00000587098 RPGRIP1LQ68CZ1 1315 aa21.61■■□□□ 1.05
CCDC130-207ENST00000587098 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
CCDC130-207ENST00000587098 NEXMIFQ5QGS0 1516 aa21.6■■□□□ 1.05
CCDC130-207ENST00000587098 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
CCDC130-207ENST00000587098 VGFO15240 615 aaPredicted RBP21.58■■□□□ 1.05
CCDC130-207ENST00000587098 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
CCDC130-207ENST00000587098 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
CCDC130-207ENST00000587098 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
CCDC130-207ENST00000587098 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
CCDC130-207ENST00000587098 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
CCDC130-207ENST00000587098 TOM1O60784 492 aa21.54■■□□□ 1.04
CCDC130-207ENST00000587098 SETBP1Q9Y6X0 1596 aa21.53■■□□□ 1.04
CCDC130-207ENST00000587098 PIK3R4Q99570 1358 aa21.53■■□□□ 1.04
CCDC130-207ENST00000587098 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
CCDC130-207ENST00000587098 NRXN3Q9Y4C0 1643 aa21.53■■□□□ 1.04
CCDC130-207ENST00000587098 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
CCDC130-207ENST00000587098 TMEM94Q12767 1356 aa21.52■■□□□ 1.04
CCDC130-207ENST00000587098 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
CCDC130-207ENST00000587098 NWD1Q149M9 1564 aa21.52■■□□□ 1.04
CCDC130-207ENST00000587098 PTPRUQ92729 1446 aa21.51■■□□□ 1.03
CCDC130-207ENST00000587098 METP08581 1390 aa21.5■■□□□ 1.03
CCDC130-207ENST00000587098 PPLO60437 1756 aa21.5■■□□□ 1.03
CCDC130-207ENST00000587098 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
CCDC130-207ENST00000587098 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
CCDC130-207ENST00000587098 PIP4K2BP78356 416 aa21.49■■□□□ 1.03
CCDC130-207ENST00000587098 NKTRP30414 1462 aaKnown RBP21.49■■□□□ 1.03
CCDC130-207ENST00000587098 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
CCDC130-207ENST00000587098 ALKQ9UM73 1620 aa21.45■■□□□ 1.02
CCDC130-207ENST00000587098 IFT172Q9UG01 1749 aa21.41■■□□□ 1.02
CCDC130-207ENST00000587098 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
CCDC130-207ENST00000587098 MSH6P52701 1360 aa21.39■■□□□ 1.02
CCDC130-207ENST00000587098 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
CCDC130-207ENST00000587098 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
CCDC130-207ENST00000587098 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
CCDC130-207ENST00000587098 C19orf44Q9H6X5 657 aa21.37■■□□□ 1.01
CCDC130-207ENST00000587098 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
CCDC130-207ENST00000587098 PIK3C2GO75747 1445 aa21.37■■□□□ 1.01
CCDC130-207ENST00000587098 HSPA1LP34931 641 aa21.36■■□□□ 1.01
CCDC130-207ENST00000587098 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
CCDC130-207ENST00000587098 C14orf93Q9H972 538 aaKnown RBP21.36■■□□□ 1.01
CCDC130-207ENST00000587098 TMEM132EQ6IEE7 984 aa21.35■■□□□ 1.01
CCDC130-207ENST00000587098 CFAP70Q5T0N1 1121 aa21.34■■□□□ 1.01
CCDC130-207ENST00000587098 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
CCDC130-207ENST00000587098 MYOM2P54296 1465 aa21.33■■□□□ 1.01
CCDC130-207ENST00000587098 NRXN1Q9ULB1 1477 aa21.33■■□□□ 1.01
CCDC130-207ENST00000587098 SLAIN2Q9P270 581 aa21.33■■□□□ 1.01
CCDC130-207ENST00000587098 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
CCDC130-207ENST00000587098 STK26Q9P289 416 aa21.32■■□□□ 1
CCDC130-207ENST00000587098 ATF3P18847 181 aa21.31■■□□□ 1
CCDC130-207ENST00000587098 CADPS2Q86UW7 1296 aa21.31■■□□□ 1
CCDC130-207ENST00000587098 STAC3Q96MF2 364 aa21.31■■□□□ 1
CCDC130-207ENST00000587098 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
CCDC130-207ENST00000587098 FAM135BQ49AJ0 1406 aa21.3■■□□□ 1
CCDC130-207ENST00000587098 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.29■■□□□ 1
CCDC130-207ENST00000587098 PTCH1Q13635 1447 aa21.29■■□□□ 1
CCDC130-207ENST00000587098 LRPPRCP42704 1394 aaKnown RBP21.28■■□□□ 1
CCDC130-207ENST00000587098 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
CCDC130-207ENST00000587098 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
CCDC130-207ENST00000587098 ABCC11Q96J66 1382 aa21.27■■□□□ 1
CCDC130-207ENST00000587098 WAPLQ7Z5K2 1190 aa21.26■□□□□ 0.99
CCDC130-207ENST00000587098 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
CCDC130-207ENST00000587098 YTHDC2Q9H6S0 1430 aaKnown RBP21.25■□□□□ 0.99
CCDC130-207ENST00000587098 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
CCDC130-207ENST00000587098 TECPR2O15040 1411 aa21.23■□□□□ 0.99
CCDC130-207ENST00000587098 DCCP43146 1447 aa21.23■□□□□ 0.99
CCDC130-207ENST00000587098 ROBO1Q9Y6N7 1651 aa21.21■□□□□ 0.99
CCDC130-207ENST00000587098 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
CCDC130-207ENST00000587098 SIRT1Q96EB6 747 aa21.21■□□□□ 0.99
CCDC130-207ENST00000587098 PLEKHH1Q9ULM0 1364 aa21.21■□□□□ 0.99
CCDC130-207ENST00000587098 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
CCDC130-207ENST00000587098 LAMC1P11047 1609 aa21.19■□□□□ 0.98
CCDC130-207ENST00000587098 NALCNQ8IZF0 1738 aa21.19■□□□□ 0.98
CCDC130-207ENST00000587098 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
CCDC130-207ENST00000587098 MST1RQ04912 1400 aa21.18■□□□□ 0.98
CCDC130-207ENST00000587098 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
CCDC130-207ENST00000587098 ADGRB1O14514 1584 aa21.17■□□□□ 0.98
CCDC130-207ENST00000587098 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
CCDC130-207ENST00000587098 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
CCDC130-207ENST00000587098 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms