RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 STRCQ7RTU9 1775 aa26.27■■□□□ 1.8
RETREG3-205ENST00000586870 CCDC144AA2RUR9 1427 aa26.27■■□□□ 1.8
RETREG3-205ENST00000586870 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.26■■□□□ 1.79
RETREG3-205ENST00000586870 SCAF11Q99590 1463 aaKnown RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 SLIT1O75093 1534 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 NUTM2DQ5VT03 806 aaPredicted RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 MIER1Q8N108 512 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 NPHP4O75161 1426 aaPredicted RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 RIMS2Q9UQ26 1411 aa26.21■■□□□ 1.79
RETREG3-205ENST00000586870 KDM5AP29375 1690 aaKnown RBP26.21■■□□□ 1.79
RETREG3-205ENST00000586870 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
RETREG3-205ENST00000586870 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
RETREG3-205ENST00000586870 CLTCL1P53675 1640 aa26.19■■□□□ 1.78
RETREG3-205ENST00000586870 RGL3Q3MIN7 710 aa26.18■■□□□ 1.78
RETREG3-205ENST00000586870 ILDR1Q86SU0 546 aaPredicted RBP26.17■■□□□ 1.78
RETREG3-205ENST00000586870 MED14O60244 1454 aa26.17■■□□□ 1.78
RETREG3-205ENST00000586870 L3MBTL2Q969R5 705 aa26.14■■□□□ 1.78
RETREG3-205ENST00000586870 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 NEURL4Q96JN8 1562 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 POLR1AO95602 1720 aaPredicted RBP26.13■■□□□ 1.77
RETREG3-205ENST00000586870 SLC26A8Q96RN1 970 aa26.12■■□□□ 1.77
RETREG3-205ENST00000586870 VGFO15240 615 aaPredicted RBP26.11■■□□□ 1.77
RETREG3-205ENST00000586870 ZNF335Q9H4Z2 1342 aaPredicted RBP26.1■■□□□ 1.77
RETREG3-205ENST00000586870 PLEKHG1Q9ULL1 1385 aa26.09■■□□□ 1.77
RETREG3-205ENST00000586870 KIF1BO60333 1816 aa26.08■■□□□ 1.77
RETREG3-205ENST00000586870 MYO5BQ9ULV0 1848 aa26.07■■□□□ 1.76
RETREG3-205ENST00000586870 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
RETREG3-205ENST00000586870 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
RETREG3-205ENST00000586870 TBX22Q9Y458 520 aa26.02■■□□□ 1.76
RETREG3-205ENST00000586870 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.75
RETREG3-205ENST00000586870 FBXO41Q8TF61 875 aa26.01■■□□□ 1.75
RETREG3-205ENST00000586870 CERKQ8TCT0 537 aa26■■□□□ 1.75
RETREG3-205ENST00000586870 NEXMIFQ5QGS0 1516 aa25.99■■□□□ 1.75
RETREG3-205ENST00000586870 HIRIP3Q9BW71 556 aaPredicted RBP25.97■■□□□ 1.75
RETREG3-205ENST00000586870 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 KCNA6P17658 529 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
RETREG3-205ENST00000586870 DDX10Q13206 875 aaKnown RBP25.95■■□□□ 1.74
RETREG3-205ENST00000586870 NBPF8Q3BBV2 869 aa25.95■■□□□ 1.74
RETREG3-205ENST00000586870 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
RETREG3-205ENST00000586870 ADAMTS13Q76LX8 1427 aa25.93■■□□□ 1.74
RETREG3-205ENST00000586870 HSPA5P11021 654 aaKnown RBP25.92■■□□□ 1.74
RETREG3-205ENST00000586870 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
RETREG3-205ENST00000586870 STAC3Q96MF2 364 aa25.9■■□□□ 1.74
RETREG3-205ENST00000586870 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
RETREG3-205ENST00000586870 CPS1P31327 1500 aa25.89■■□□□ 1.73
RETREG3-205ENST00000586870 AMOTL2Q9Y2J4 779 aa25.88■■□□□ 1.73
RETREG3-205ENST00000586870 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
RETREG3-205ENST00000586870 DIP2AQ14689 1571 aa25.86■■□□□ 1.73
RETREG3-205ENST00000586870 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
RETREG3-205ENST00000586870 PPLO60437 1756 aa25.85■■□□□ 1.73
RETREG3-205ENST00000586870 METP08581 1390 aa25.84■■□□□ 1.73
RETREG3-205ENST00000586870 MYOM2P54296 1465 aa25.81■■□□□ 1.72
RETREG3-205ENST00000586870 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
RETREG3-205ENST00000586870 CFAP70Q5T0N1 1121 aa25.8■■□□□ 1.72
RETREG3-205ENST00000586870 C14orf37Q86TY3 774 aa25.8■■□□□ 1.72
RETREG3-205ENST00000586870 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
RETREG3-205ENST00000586870 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
RETREG3-205ENST00000586870 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
RETREG3-205ENST00000586870 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 NRXN3Q9Y4C0 1643 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 LRRC7Q96NW7 1537 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 TMEM132EQ6IEE7 984 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 TMEM94Q12767 1356 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 STK26Q9P289 416 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 RALGAPBQ86X10 1494 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 UBAP1LF5GYI3 381 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 PTPRUQ92729 1446 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 NKTRP30414 1462 aaKnown RBP25.75■■□□□ 1.71
RETREG3-205ENST00000586870 IFT172Q9UG01 1749 aa25.75■■□□□ 1.71
RETREG3-205ENST00000586870 WASHC2AQ641Q2 1341 aa25.75■■□□□ 1.71
RETREG3-205ENST00000586870 TOM1O60784 492 aa25.74■■□□□ 1.71
RETREG3-205ENST00000586870 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 STRCP1A6NGW2 1772 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 ANP32CO43423 234 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
RETREG3-205ENST00000586870 CHD2O14647 1828 aaKnown RBP25.7■■□□□ 1.71
RETREG3-205ENST00000586870 CCDC7Q96M83 1385 aa25.7■■□□□ 1.7
RETREG3-205ENST00000586870 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
RETREG3-205ENST00000586870 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
RETREG3-205ENST00000586870 MSH6P52701 1360 aa25.68■■□□□ 1.7
RETREG3-205ENST00000586870 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
RETREG3-205ENST00000586870 USP47Q96K76 1375 aa25.67■■□□□ 1.7
RETREG3-205ENST00000586870 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
RETREG3-205ENST00000586870 C19orf44Q9H6X5 657 aa25.65■■□□□ 1.7
RETREG3-205ENST00000586870 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
RETREG3-205ENST00000586870 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.69
RETREG3-205ENST00000586870 ATF3P18847 181 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 ABCC11Q96J66 1382 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 C11orf95C9JLR9 678 aaPredicted RBP25.63■■□□□ 1.69
RETREG3-205ENST00000586870 ROBO2Q9HCK4 1378 aa25.62■■□□□ 1.69
RETREG3-205ENST00000586870 TRAK1Q9UPV9 953 aa25.62■■□□□ 1.69
RETREG3-205ENST00000586870 LAMC1P11047 1609 aa25.61■■□□□ 1.69
RETREG3-205ENST00000586870 CARD11Q9BXL7 1154 aa25.61■■□□□ 1.69
RETREG3-205ENST00000586870 PTCH1Q13635 1447 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms